Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU92058
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:55609081:55626018:-1 gene:SORBI_3001G283700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCACGCGCCGCCGCTGGTCGCGTTCGCAGGGGGCGCCTGCCCCGCCACCGCCGCCTCG
TCCTCGCCGTCGCCCTGGCTGGCCTCGCCGCGGGCCGCCATCCTCGCCGCGCCGGCGAGG
CTCCTACGGTCCCGCCGCGGGGCACTTCGGCTGGAAGCCAAGGCCGCGTGGAGGGCTGCC
GGAGGGGGACGGGGCCCGAGGGTCCCGGCCAAGGGCGCTGTGCTCGCCTCCTATATGGGC
GCCGAGGAGGTGGTGGGACCTTCGTCGCTGCTCGACGAGGAAGAGCTCATTTCACATATC
AGAAAGGAACTGGATAATGGAAAACTCCCTGCAGATGTTGCCAGTAATCTGGAGGAGTTG
TATTATAATTACAGGAATGCTGTTCTGCAAAATGGAGATCCTAATGCATATGAGATCATG
CTTTCAAATATGACGGCTTTGTTTGATCGTGTTCTACTGGATGTACAGAATCCATTTACC
TTTCCACCTTATCACAAAGCTGTGCGAGAACCGTTCGACTATTACATGTTTGGTCAGAAC
TACATTAGGCCTCTGGTAGATTTCAGGAACTCCTATGTTGGCAACATTTCACTTTTTCAT
GACATGGAAGAGAAGCTGCACCAGGGCCACAATGTTGTTTTGATGTCTAACCATCAGACA
GAAGCAGATCCAGCAATTATCTCCTTGCTTCTTGAAAAAACCAATCCATGGATTAGTGAA
AACATAGTTTATGTTGCTGGAGATAGGGTTGTTATGGATCCACTTTGCAAGCCATTTAGC
ATGGGAAGAAATCTCATTTGCGTGTACTCGAAAAAGCATATGAATGATTTTCCTGAGCTA
GTTGAGATGAAGAGGAGATCAAATACCCGAAGTCTCAAGGAAATGGCCTTGCTTTTACGT
GGTGGCTCACAGTTAATTTGGATTGCACCAAGTGGTGGTAGAGACCGCCCAAATCCTTCA
ACAGGAGAATGGTACCCGGCGCCATTCGATTCATCTGCAGTGGACAATATGAGGAGGCTT
CTGGAGCATGCTGGCGTTCCTGGGCACATATATCCACTATCATTGCTGTGCTATGAGGTT
ATGCCTCCACCACAACAGGTTGAGAAAGAGATTGGTGAGCAGAGGGTGATATCCTTCCAT
GGAGTAGGCTTGTCAGTAACTGAAGAAATAAAATATGGGGATATTACTGCTCATACCAAG
AATGCTGATGAGGGAAGGGAGCTATTCACAAATACTTTGTACAACTCAGTTGTTAATCAG
TACGATGTGCTCAAATCTGCTATCTTTAGAGATCGTGGAGCAGCTGTATCAAACAATGTC
ATCTCATTGTCACAACCATGGAGATGA

Peptide Sequence

PEP ID

OQU92058
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:55609081:55626018:-1 gene:SORBI_3001G283700 transcript:OQU92058 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MHAPPLVAFAGGACPATAASSSPSPWLASPRAAILAAPARLLRSRRGALRLEAKAAWRAA
GGGRGPRVPAKGAVLASYMGAEEVVGPSSLLDEEELISHIRKELDNGKLPADVASNLEEL
YYNYRNAVLQNGDPNAYEIMLSNMTALFDRVLLDVQNPFTFPPYHKAVREPFDYYMFGQN
YIRPLVDFRNSYVGNISLFHDMEEKLHQGHNVVLMSNHQTEADPAIISLLLEKTNPWISE
NIVYVAGDRVVMDPLCKPFSMGRNLICVYSKKHMNDFPELVEMKRRSNTRSLKEMALLLR
GGSQLIWIAPSGGRDRPNPSTGEWYPAPFDSSAVDNMRRLLEHAGVPGHIYPLSLLCYEV
MPPPQQVEKEIGEQRVISFHGVGLSVTEEIKYGDITAHTKNADEGRELFTNTLYNSVVNQ
YDVLKSAIFRDRGAAVSNNVISLSQPWR

Transcript Sequence

Transcript ID

OQU92058
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:55609081:55626018:-1 gene:SORBI_3001G283700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GACATTAAATTTTATAATGGTGAAGTTGTCTCGTATAGTCATAAATATTTGTTCATGAGG
GTTACTTCATTAAACAACCACCTCTTTCAATCACCTTCCTCTCTTCTATTTGTCTAAGAG
CAAGGTTAATAATAGAGCCAAGTGTTTGACTATAAGCCAAGTGATTAGAGCCAAGTTATA
CAGTAAGTTGTCTCATACTTATCTCTAAGACACATTCTTTTTTTTTATTTTTCCTCACAA
CACTTGCTATTTAGGCCCACCACTATCTATGCATCCGTGTTCAGCTTGGTGCTTAAATGA
GAGTCAAACTATCATCTCTCTTCTGTTTTCTTTCCTCCGCATCAACATTAGCTTGTCTAT
AAACCCATTATTGTACATATTTAAAAAAAGTCCTTTTCTATATGATATTGTATGAGATGC
CTTTAGTTCGGGTTGATATGTAGCAATGTAGGAGTAGCTGTTTTTTTAGGCCAAGGGATA
GATGATGGGCATTAAGACAAGGACGTGTGTGCCAAAATCAAGGAAAGACAAAGGTGCGGT
GCATCCAATTGGTTCCCTCGACAAATCCTACCCACACACAAGGCCCTAAAAAATATCATC
CCGTTTCCTTGCTGTATATAAATAATTTTTTCCCTCCTATTTTAATTTTCTTCGCAGAAA
AAAACTAGTAAAACAGAAAAATCGAGTAAAAATGCGCTGCTAGCAGGGGTGAGCGGGCCG
AGGACGGAGGCTTCATCTCGTGTCGACGCCTTCCTCGCCCTCTCCGTCCGTCTCGTCTTC
CGCTCCTCCGCAGCTGGACTCGTGCGCTATTCCCCAGGCCGCCACTCCCACTAGGGTTTT
CCGGATTAGGTTTCTAGAACCTTCCGTCGCCGCCTCCCCATGCACGCGCCGCCGCTGGTC
GCGTTCGCAGGGGGCGCCTGCCCCGCCACCGCCGCCTCGTCCTCGCCGTCGCCCTGGCTG
GCCTCGCCGCGGGCCGCCATCCTCGCCGCGCCGGCGAGGCTCCTACGGTCCCGCCGCGGG
GCACTTCGGCTGGAAGCCAAGGCCGCGTGGAGGGCTGCCGGAGGGGGACGGGGCCCGAGG
GTCCCGGCCAAGGGCGCTGTGCTCGCCTCCTATATGGGCGCCGAGGAGGTGGTGGGACCT
TCGTCGCTGCTCGACGAGGAAGAGCTCATTTCACATATCAGAAAGGAACTGGATAATGGA
AAACTCCCTGCAGATGTTGCCAGTAATCTGGAGGAGTTGTATTATAATTACAGGAATGCT
GTTCTGCAAAATGGAGATCCTAATGCATATGAGATCATGCTTTCAAATATGACGGCTTTG
TTTGATCGTGTTCTACTGGATGTACAGAATCCATTTACCTTTCCACCTTATCACAAAGCT
GTGCGAGAACCGTTCGACTATTACATGTTTGGTCAGAACTACATTAGGCCTCTGGTAGAT
TTCAGGAACTCCTATGTTGGCAACATTTCACTTTTTCATGACATGGAAGAGAAGCTGCAC
CAGGGCCACAATGTTGTTTTGATGTCTAACCATCAGACAGAAGCAGATCCAGCAATTATC
TCCTTGCTTCTTGAAAAAACCAATCCATGGATTAGTGAAAACATAGTTTATGTTGCTGGA
GATAGGGTTGTTATGGATCCACTTTGCAAGCCATTTAGCATGGGAAGAAATCTCATTTGC
GTGTACTCGAAAAAGCATATGAATGATTTTCCTGAGCTAGTTGAGATGAAGAGGAGATCA
AATACCCGAAGTCTCAAGGAAATGGCCTTGCTTTTACGTGGTGGCTCACAGTTAATTTGG
ATTGCACCAAGTGGTGGTAGAGACCGCCCAAATCCTTCAACAGGAGAATGGTACCCGGCG
CCATTCGATTCATCTGCAGTGGACAATATGAGGAGGCTTCTGGAGCATGCTGGCGTTCCT
GGGCACATATATCCACTATCATTGCTGTGCTATGAGGTTATGCCTCCACCACAACAGGTT
GAGAAAGAGATTGGTGAGCAGAGGGTGATATCCTTCCATGGAGTAGGCTTGTCAGTAACT
GAAGAAATAAAATATGGGGATATTACTGCTCATACCAAGAATGCTGATGAGGGAAGGGAG
CTATTCACAAATACTTTGTACAACTCAGTTGTTAATCAGTACGATGTGCTCAAATCTGCT
ATCTTTAGAGATCGTGGAGCAGCTGTATCAAACAATGTCATCTCATTGTCACAACCATGG
AGATGAATGTTAGCTTTCTCAGTTTGGGTCGACCCTGATCTTCATTTCCTTGTGTCCTAC
TATTTGTTTGACAAATACTAGTATTAGGGTCCATTAAGTATGACTTGAAATTTTAAATCC
TTAAAAAGATTGCGCTTGTTTAATTGTTGCCTGGTGTTTATGGGTAATTTTCATACTTAA
TGTTTATAGCGATCCACTGTTTACATCTGACAGTTACGGCTAGCATAGACATAGTAGCAT
GTAATCCCAGCGACTAGTGTATGTAGATTCCATGAGGTTATGTTTATTTTAATTGATTCA
TTTATACAGTAATTAATTTCTCTACTGTATGTTAATCTGTGTATATTATGTTTGTTCATT
GACAACAACTCATTAGATGGGTGTCCTAACAGACGAATTTTGCTACTGTATTCAGGTCCA
GATTTATTACTGAAGTTACCTTTTCAGAAGAGCAGGTGAACTGCCATTGTGCAATTTCAC
TGGAGAAACTCTTGAACTTTAATCTTTTTGATACCACTCGACTTTATCAGTCATGGTGGA
GCCTGTCATTGTCATGCAGATCCTGTAAGTCTTGGGAAAACCTGTTTTACTCCCTTTGCG
AATGCACTGACTCAACCGTATCAAATGCTTGTGTGCTGTGTTCTTGTAGTGCTAAGAAGT
CTGTGGACAACTGTTGGTTGGTCAAGGGTGACTGGTGATTCTGCACATAGGGATCCTCGT
AACTGTTGCATGCGGTCGTCCGCAAATTACTGGTTGCTCAGCAACGTGCTGGTTGGGCAC
TGAGGAATCCGTCAGGTTGCATCCTTTTTGCCTTGACGTCAATTTGTGTAGTTGAAGGTT
GAAGTGATAAATTGTTTTATCTTGTCTTGTCATCATGTATATAGGCTCGAGTCTTTTTTG
GCTCCACATTTTTTTGGAGATATAAAAGCAGCAGGAGTTATGACATGCCCTCAGTCGGCC
CTCCTTGTTGAAACCCTTTGGATGTAACCTGTCTATTTCTTATATATACTCACTGAAAGT
CAAGGCAAATACCCTGTGTTTCGAGTACGTGGCTCCATGACTACCTTGCGGCTCCTGTCT
AGCTGGAGATGGAGCGTAAAGAATCTGTCCGTCTATTATCTGTAGCTGTAGTGATTTATT
TCCTTGGGTTGGCATTGTGACGAAAGTGTAGATTGCCAGGGAGGGCGAAGGTGACAGGAT
CGGTGGAAAAACCAAACTCGAGCTGGTGAGACGGATGGAT