Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU92057
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:55596492:55606709:1 gene:SORBI_3001G283600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGTGTAATCAGCACTGTTCTTGGTTTCACTGGATTTGGCTTTGGGTTCTCGGCTGGC
ATTGTTATTGGGTACTTCCTCTTCATCTATGTCCAGCCAGCTGATGTCAAGGATGTCAAA
GTTCGCCCGCTTGTGGAATATGATTCAAAATCTTTGGAGGGCATCCTTCCTGAAATTCCA
CTGTGGGTCAAGAATCCCGACTATGATAGAATTGATTGGCTGAACAGGTTTTTGGAATTG
ATGTGGCCTTATCTTGACAAGGCTATCTGCAGAACTGCACAGGATATCGCAAAGCCAATT
ATTGCTGAGAATACTGCAAAGTATAAGATAGACTCTGTTGAGTTTGAAACACTTACTTTG
GGTAGTCTACCACCCACCTTTCAAGGGATGAAAGTCTATGTCACAGAGGAGCAAGAGTTG
ATAATGGAACCATGTCTTAAATGGGCTGCAAATCCAAATGTCACAGTTGTTATAAAGGCT
TATGGTTTGAAAGCTACTGTCCAGATTGTTGATCTACAAGTCTTTGCATTACCTCGTATT
ACTCTGAAGCCATTAGTGCCTACATTTCCTTGCTTTGCAAAAATCCTTGTCTCGCTAATG
GAGAAGCCACATGTTGACTTTGGGCTAAAGATTCTTGGAGCTGATGTAATGGCTATTCCT
GGTCTTTACAGATTTGTCCAGGAGACCATCAAGAAGCAAGTCGCAATCATGTATTTGTGG
CCGAAGACACTAGAAGTACCTATAATGGACCCCTCAAAAGCATCAAAAAAGCCTGTTGGA
ATTCTACTTGTGAAGGTCATAAGAGCCCAAAATTTGCGAAAGAAGGATCTGCTGGGTAAA
TCAGACCCATATGTGAAACTTAAAATGTCAGATGATAAGCTTCCATCCAAGAAGACTACT
GTAAAGCGCAGCAATCTCAATCCAGAGTGGAATGAAGATTTTAAGTTTGTAGTGACTGAT
CCAGAAAACCAGGCTCTTGAAGTTAATGTCTTCGACTGGGAACAGGTTGGGAAACATGAA
AAGATGGGAATGAACATGGTCCTACTGAAAGACCTCCCACCTGAGGAGACTAAAGTTACT
ACCCTCAACTTGCTTAAGACCATGGATCCAAATGATGTACAAAATGAGAAGTCTCGTGGC
CAGCTTACTCTAGAGCTCACATACAAACCTTTCAAGGAAGAAGATGGCGAGATAGAAGAT
ACAGAGGGTACCAATGTGATAGAAAAAGCTCCAGATGGCACTCCAGCTGGCGGTGGATTG
CTTTTTGTTATTGTTCATGAAGCCAAAGATCTTGAGGGGAAGCACCATACAAACCCCTAT
GCAAAAATAATTTTCAAAGGCGAAGAGAAGAAAACAAAGGTCATCAAGAAGAATAGGGAT
CCACGATGGGTGGATGAATTCGAGTTTGTGTGCGAGGAGCCTCCTGTAAATGATAAACTA
CATGTTGAAGTCCTAAGTAAAGCCCCGAAGAAAGGGCTGATATATGGCAAGGAAACTTTG
GGCTACATTGATGTCAGCCTTGCAGACGTGATCAGTAACAAGAGAATTAATGAGAAGTAC
CATCTCATAGACTCAAAAAATGGTCAGATCCAAATTGAGTTGCAGTGGAGAACTTCCTAG

Peptide Sequence

PEP ID

OQU92057
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:55596492:55606709:1 gene:SORBI_3001G283600 transcript:OQU92057 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGVISTVLGFTGFGFGFSAGIVIGYFLFIYVQPADVKDVKVRPLVEYDSKSLEGILPEIP
LWVKNPDYDRIDWLNRFLELMWPYLDKAICRTAQDIAKPIIAENTAKYKIDSVEFETLTL
GSLPPTFQGMKVYVTEEQELIMEPCLKWAANPNVTVVIKAYGLKATVQIVDLQVFALPRI
TLKPLVPTFPCFAKILVSLMEKPHVDFGLKILGADVMAIPGLYRFVQETIKKQVAIMYLW
PKTLEVPIMDPSKASKKPVGILLVKVIRAQNLRKKDLLGKSDPYVKLKMSDDKLPSKKTT
VKRSNLNPEWNEDFKFVVTDPENQALEVNVFDWEQVGKHEKMGMNMVLLKDLPPEETKVT
TLNLLKTMDPNDVQNEKSRGQLTLELTYKPFKEEDGEIEDTEGTNVIEKAPDGTPAGGGL
LFVIVHEAKDLEGKHHTNPYAKIIFKGEEKKTKVIKKNRDPRWVDEFEFVCEEPPVNDKL
HVEVLSKAPKKGLIYGKETLGYIDVSLADVISNKRINEKYHLIDSKNGQIQIELQWRTS

Transcript Sequence

Transcript ID

OQU92057
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:55596492:55606709:1 gene:SORBI_3001G283600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGATTCGTGGGGTTATTGCCCTCGAACCTGCTTGCGTAGGTTCGACCTGGTCTTCTCTCT
CTCGCGCGCGCGCGGGCGCGCTAGTGATTTCGACCCGTGTCGGCTCGCGAGAACAAGGCG
TGGGAGGAATGGCCGATAAAGCCGCCTACTGGTTGGAGGCATTGCTCTGTTTGTTTAGAT
CTTTCAGAATTTGTCAGTTAAAGCGATGCAGTTCTCGTTATTATTTTTTTTGCGCTACAA
CCCTATAACTTGATTCTTAACGCATTGTGTAATTCATAGGGTATAGCCAGGAATAAGCAT
GCTCAAATCTATAGACTGCCAGTGTTTTGTTGTCCATTCAAACATTTTTTTTCCTTCGAA
TGGAAAACAATTTTCTCCCTTTAACATTGAGAGTTTCTGTTCAGGGAATGCCTGAAACCT
GTGATTCTTGAATCGTCCTGGCTGAAAATGTTGTGATCCGATTCATGATTCTGGTCCTTA
AGTTGGACCCAACCTTTTTTTTTTCCTTCCTGAAACATACATTGCATTTTGGTTAACACA
GGCCCTGTTTGGTTCCCCTTGCTAAATTTTAGCCAGCTTAAATTATTTTAGCTACTCTTG
GGTGACTAGTGAGACTAAACTATTTTAGCTCCTTTTAGTCAGTGTGTTTTGAAGTTTAGC
TACTATAAAGTGACTAAAGTTTAGCTGGCTAAAGTTTAGCAAGGGGAACCAAACAGGCCT
TAAAGGTAAAGATATCCCTTTCGGTTATTGACTTTTCCATTGAACTATTGCACACTTTTT
CATATCTTTAAAGTCCACCAGACCACCACTCTTGATCTGATCCAATCTAAAACCTACCTC
AAAAGCAAAGATTAAAGCTTCAACCTTACCCTCTTTAAAGATGTCAGCATGCCACCCTTG
ATGTTATTTTCCTCCACTATTTGTATCCACCTTCTGTCGTCTCAACTAATATTCAATAGC
ATGCAGTAACATGGTGCCAACTCAAGTATTCTTGTTTGCCACAAGGTCCTTATATTCATG
TTATCAAACGAATTGGCACGGTGCTTTATTGCTATTGTTTAATTATCAGCTACTTGCTTG
TCACTTTCACTGCATTTTTAAACAGTTCTGATGCTGTTCTTTTGATGTGTTGTAAAGCAT
TACTTTCGTAGCTGGTGAGAAGCTTTATTGATGGCTCCTTTAGTTTCTAATTCTAATAGT
TTCTAATTCTAATGTTGGAAGTTGATTTCCTGCTTGGGAGAATCCATATAAATATGTTTG
ACCAATGATTTATGATCTAGGTGTTGTTTTATACTGTATTGTTTTATCACTCAAGTTGTA
TCCTCACAATTTAGCAAAGTGAAATGTTTTTGTTTTGTTTTCTTTTTCATGAGTGCAAAT
TTCGATTGACTATATCCTCTCTTAATGTTTGTTTTGCAGCTTTTGGTTGAAAGCCGGCAT
TTGGTCTGAAGGTTCTGGCAGGAATCCAAGATGGGTGTAATCAGCACTGTTCTTGGTTTC
ACTGGATTTGGCTTTGGGTTCTCGGCTGGCATTGTTATTGGGTACTTCCTCTTCATCTAT
GTCCAGCCAGCTGATGTCAAGGATGTCAAAGTTCGCCCGCTTGTGGAATATGATTCAAAA
TCTTTGGAGGGCATCCTTCCTGAAATTCCACTGTGGGTCAAGAATCCCGACTATGATAGA
ATTGATTGGCTGAACAGGTTTTTGGAATTGATGTGGCCTTATCTTGACAAGGCTATCTGC
AGAACTGCACAGGATATCGCAAAGCCAATTATTGCTGAGAATACTGCAAAGTATAAGATA
GACTCTGTTGAGTTTGAAACACTTACTTTGGGTAGTCTACCACCCACCTTTCAAGGGATG
AAAGTCTATGTCACAGAGGAGCAAGAGTTGATAATGGAACCATGTCTTAAATGGGCTGCA
AATCCAAATGTCACAGTTGTTATAAAGGCTTATGGTTTGAAAGCTACTGTCCAGATTGTT
GATCTACAAGTCTTTGCATTACCTCGTATTACTCTGAAGCCATTAGTGCCTACATTTCCT
TGCTTTGCAAAAATCCTTGTCTCGCTAATGGAGAAGCCACATGTTGACTTTGGGCTAAAG
ATTCTTGGAGCTGATGTAATGGCTATTCCTGGTCTTTACAGATTTGTCCAGGAGACCATC
AAGAAGCAAGTCGCAATCATGTATTTGTGGCCGAAGACACTAGAAGTACCTATAATGGAC
CCCTCAAAAGCATCAAAAAAGCCTGTTGGAATTCTACTTGTGAAGGTCATAAGAGCCCAA
AATTTGCGAAAGAAGGATCTGCTGGGTAAATCAGACCCATATGTGAAACTTAAAATGTCA
GATGATAAGCTTCCATCCAAGAAGACTACTGTAAAGCGCAGCAATCTCAATCCAGAGTGG
AATGAAGATTTTAAGTTTGTAGTGACTGATCCAGAAAACCAGGCTCTTGAAGTTAATGTC
TTCGACTGGGAACAGGTTGGGAAACATGAAAAGATGGGAATGAACATGGTCCTACTGAAA
GACCTCCCACCTGAGGAGACTAAAGTTACTACCCTCAACTTGCTTAAGACCATGGATCCA
AATGATGTACAAAATGAGAAGTCTCGTGGCCAGCTTACTCTAGAGCTCACATACAAACCT
TTCAAGGAAGAAGATGGCGAGATAGAAGATACAGAGGGTACCAATGTGATAGAAAAAGCT
CCAGATGGCACTCCAGCTGGCGGTGGATTGCTTTTTGTTATTGTTCATGAAGCCAAAGAT
CTTGAGGGGAAGCACCATACAAACCCCTATGCAAAAATAATTTTCAAAGGCGAAGAGAAG
AAAACAAAGGTCATCAAGAAGAATAGGGATCCACGATGGGTGGATGAATTCGAGTTTGTG
TGCGAGGAGCCTCCTGTAAATGATAAACTACATGTTGAAGTCCTAAGTAAAGCCCCGAAG
AAAGGGCTGATATATGGCAAGGAAACTTTGGGCTACATTGATGTCAGCCTTGCAGACGTG
ATCAGTAACAAGAGAATTAATGAGAAGTACCATCTCATAGACTCAAAAAATGGTCAGATC
CAAATTGAGTTGCAGTGGAGAACTTCCTAGACAGGAAGAGCAAGAATGCATGATGTGGTA
TACATATGAATGTTCGTGTACTGAGTTTGCGGATACCTGTAATTGAGCTCATGTAGATAT
TCCTTTTGTTTGCAGACATCTGTTGAGATTTTTTTCCCCCTTTTAATTGCTCAGATTTAC
TAGAAATACTATGTAGGCATGTGATCCCTGGAACGGAACTGAGCTTATTCTGGACTAAAG
AAGGACAATACAAACACACAGCATTCCGGAA