Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU92048
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:54877451:54886205:1 gene:SORBI_3001G280100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCAATGATGGTGCCTGATCTTAGTTTCTCAGCATCAATGTCTAGTGTGAAGCTCCCA
AGGTACGGGGCATCAAAGACTGAGACATTCTTGGTTAAGAGGTCCTCAACATTCCGTGCA
GAAGCTAGGCCAGCGGAATCTGGAAAATATGGTACTAATGGCCGGGCAACAAAGATGGTA
CCAACAACTGAGTTGAGGAGGACCAATGGTGGTGGTCATGTAAGATCGGGTTCAGTTCAT
GGTTCTCCAAATGGCTCTGTCAATGGCTCGACCAAGGTGTCAATTAATGGTTCTGCAAAG
GCCATTGTGAATGGCTCAACCAAAGCAGTCATTAATGGTACTCCGAAGGTGGCTGTAAAT
GGTACTAGTCTGGTGAAAAGCAGCACATCCTCCCTTGTTAAGACGCAGAAGCAAATGAGA
CCCAAAGATGATCCCTTTCAAGAGGAATTGAAGATTTTGCCTTCTGATGAGGGATTCAGT
TGGGCAAAAGATAATTATAACTCTGTGCAGAGGAGCATAGATATATGGTCTTTTGTGCTT
TCTTTGCGAGTCCGTGTGCTATTTGACAACGCAAAGTGGGCCTATCCTGGTGGATTCTCA
GAAGAAAAGCAGAAAGTTCGAAGGCGGAAAACTGCTTCATGGTTAAGAGAGCAAGTATTG
CAGCTTGGCCCAACGTTTATTAAACTTGGACAGTTATCCTCCACTAGATCTGATTTATTC
CCCAGAGAATTTGTGGACGAGCTTGCAAAACTTCAGGACAGAGTACCGGCATTTTCTCCT
GAGAAGGCCAAAGTTTTCATAGAGAAGGAAATGGGTTGTTCTATTGATGTTGTGTACAAA
GAATTTGAAGAACGCCCAATAGCTGCTGCCAGTCTTGGTCAGGTACACCGTGCAGTGCTC
CACAATGGAGAAAGAGTTGCAGTGAAAGTTCAGAGACCTGGGCTCAAAAAACTTTTTGAC
ATCGACCTGAGGAACTTAAAGCTAGTAGCTGAGTATTTTCAAAGAAGTGAGACATTAGGA
GGCCCTTCAAGGGACTGGATCGGTATTTATGAGGAATGCTCCAAAATTTTATATGAAGAA
ATTGATTACATTAATGAAGGAAAGAACGCAGACAGGTTTCGACGGGATTTCAGAAATATA
AAGTGGGTTCGCGTGCCACTTATCATGTGGGACTACACAACTGAAAAGGTGTTAACCCTG
GAGTATGTCCCTGGTATTAAAATAAACAATTTGGATGTTCTTGACAACCGGGGCTATAGT
CGCTCACTAATTGCATCACGTGCAATAGAATCTTACCTAATTCAGATATTGAAGACTGGC
TTCTTCCATGCTGATCCTCATCCTGGAAACCTTGCTGTAGACAAGGATGGTTCTCTAATA
TATTACGATTTTGGAATGATGGGTGATATAAAGTCGTTCACTCGGGAGAGATTACTTTCC
CTATTTTATTCTGTGTATGAGAAGGATGCAAACAAGGTTATGAAAGCTCTGATTGATTTG
GAAGCTCTCCAGCCGACAGGAGATCTCTCACCGGTTAGGAGGTCCATACAATTTTTCTTG
GATAATCTGTTGAACCAGACACCAGATCAGCAACAGACTCTGGCCGCAATTGGAGAGGAC
TTATTTGCCATAGCACAAGATCAACCTTTTCGGTTTCCATCCACATTTACATTTGTTATA
AGGGCATTCTCTACTCTTGAAGGCATTGGATACATATTAGATCCAGAATTTTCGTTTGTC
AAAGTTGCAGCACCATATGCGCAGGAACTGTTAGACTTGAAACAGAGACAACAACGTGGA
CCTGCATTGGTCCAGGAGATAAGGAAGCAAGCAAATGATGCCCGTGATTCTACCATATCA
ATGCCCTACAGAATACAGAGAATTGAAGATTTTGTAGGACAACTTGAGTCAGGCGATCTG
AAACTCAGGGTCAGGGTACTGGAGTCAGAACGTGCTGCACGTAAAGCTACTGTTCTTCAG
ATGGCAACCATGTATACAGCCTTGGGTGGTACTCTCTTGAATGTTGGGGTCACACTGAAT
ACTCAAGGGAACCAAATAATTGCAAACGGCTCTTTCATTGGCGCAGGAATATTTTTGGCA
TTGCTGGTCAGATCTATGCAAAGAGTGAAGAAACTCGACAAATTTGAGACCATGATATGA

Peptide Sequence

PEP ID

OQU92048
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:54877451:54886205:1 gene:SORBI_3001G280100 transcript:OQU92048 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAMMVPDLSFSASMSSVKLPRYGASKTETFLVKRSSTFRAEARPAESGKYGTNGRATKMV
PTTELRRTNGGGHVRSGSVHGSPNGSVNGSTKVSINGSAKAIVNGSTKAVINGTPKVAVN
GTSLVKSSTSSLVKTQKQMRPKDDPFQEELKILPSDEGFSWAKDNYNSVQRSIDIWSFVL
SLRVRVLFDNAKWAYPGGFSEEKQKVRRRKTASWLREQVLQLGPTFIKLGQLSSTRSDLF
PREFVDELAKLQDRVPAFSPEKAKVFIEKEMGCSIDVVYKEFEERPIAAASLGQVHRAVL
HNGERVAVKVQRPGLKKLFDIDLRNLKLVAEYFQRSETLGGPSRDWIGIYEECSKILYEE
IDYINEGKNADRFRRDFRNIKWVRVPLIMWDYTTEKVLTLEYVPGIKINNLDVLDNRGYS
RSLIASRAIESYLIQILKTGFFHADPHPGNLAVDKDGSLIYYDFGMMGDIKSFTRERLLS
LFYSVYEKDANKVMKALIDLEALQPTGDLSPVRRSIQFFLDNLLNQTPDQQQTLAAIGED
LFAIAQDQPFRFPSTFTFVIRAFSTLEGIGYILDPEFSFVKVAAPYAQELLDLKQRQQRG
PALVQEIRKQANDARDSTISMPYRIQRIEDFVGQLESGDLKLRVRVLESERAARKATVLQ
MATMYTALGGTLLNVGVTLNTQGNQIIANGSFIGAGIFLALLVRSMQRVKKLDKFETMI

Transcript Sequence

Transcript ID

OQU92048
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:54877451:54886205:1 gene:SORBI_3001G280100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AATTCCTCCGTGGGGTGCGCAGACTGCACATGTTTCCTTCTTCCTTCCCTGTTCAGTCGT
CCTCCCGCTCCCCCCTCACGGTCACGGCCTCACCTCTCCTCGCCGACGGAATCGGAAGCA
GGTAACCCCTTCTTTCACGACTCTCACTCCTCCTCATCCACTCATTTAACCCCTCCTTGA
ACGACTCTCACTCCTCATCATCCACTCGTTTCGTTTCTTTTCGGTATTAGTTTTACTTCC
AGTCGAAATCTGCGCCCGTGGACCGGCGTCTTGCATGAAATTGGTTCGGGAAATGAGTGA
TTTTGTGGTGGTCTAGAGACTTGATTGGACAGTTCATCAGTGGAACTAACAAGATTGATT
GCTGCGTGTGAGCCTTTTCATGTCTTGATAATTTTTTTGAGGAAACAGGAGAGGCGCAAG
GCCTCTAATGTCTTGATAAATTCTCGGGCACTCGAGTTAGACTAAATAGTATTGTTGAGA
ATTAGGTCCAGTAGTTCTACCTGGAATGAACATTTTTTTCAACTTATCAATATTATTCAA
CTATAACCTTCAGGCATGAACACTACTGCTGAATTTCTTGGCTGATCCTTTATGAGCAAT
ATGTAAATTAGTTACCCCGGCCCATTTCCTCTGAGCTCATTATTGCTAATTTCCGGAGAA
GTTTCATAAATTATTGTGGGTATTTATTATTGAGGTAGTCTTGAAAAAAAAAGGACAACT
TTGTTAGTGTGATTCAGGACATTTGTTGTTTTCTGTCAGGATTGCTGGACGGGCATGTGG
GTAATAGTTTCTAGAATCTAGATGTATGCTAATGTGTGATTCTCTGGACAGGGGCTTCTG
ATTGGTCATACTCATGGCAATGATGGTGCCTGATCTTAGTTTCTCAGCATCAATGTCTAG
TGTGAAGCTCCCAAGGTACGGGGCATCAAAGACTGAGACATTCTTGGTTAAGAGGTCCTC
AACATTCCGTGCAGAAGCTAGGCCAGCGGAATCTGGAAAATATGGTACTAATGGCCGGGC
AACAAAGATGGTACCAACAACTGAGTTGAGGAGGACCAATGGTGGTGGTCATGTAAGATC
GGGTTCAGTTCATGGTTCTCCAAATGGCTCTGTCAATGGCTCGACCAAGGTGTCAATTAA
TGGTTCTGCAAAGGCCATTGTGAATGGCTCAACCAAAGCAGTCATTAATGGTACTCCGAA
GGTGGCTGTAAATGGTACTAGTCTGGTGAAAAGCAGCACATCCTCCCTTGTTAAGACGCA
GAAGCAAATGAGACCCAAAGATGATCCCTTTCAAGAGGAATTGAAGATTTTGCCTTCTGA
TGAGGGATTCAGTTGGGCAAAAGATAATTATAACTCTGTGCAGAGGAGCATAGATATATG
GTCTTTTGTGCTTTCTTTGCGAGTCCGTGTGCTATTTGACAACGCAAAGTGGGCCTATCC
TGGTGGATTCTCAGAAGAAAAGCAGAAAGTTCGAAGGCGGAAAACTGCTTCATGGTTAAG
AGAGCAAGTATTGCAGCTTGGCCCAACGTTTATTAAACTTGGACAGTTATCCTCCACTAG
ATCTGATTTATTCCCCAGAGAATTTGTGGACGAGCTTGCAAAACTTCAGGACAGAGTACC
GGCATTTTCTCCTGAGAAGGCCAAAGTTTTCATAGAGAAGGAAATGGGTTGTTCTATTGA
TGTTGTGTACAAAGAATTTGAAGAACGCCCAATAGCTGCTGCCAGTCTTGGTCAGGTACA
CCGTGCAGTGCTCCACAATGGAGAAAGAGTTGCAGTGAAAGTTCAGAGACCTGGGCTCAA
AAAACTTTTTGACATCGACCTGAGGAACTTAAAGCTAGTAGCTGAGTATTTTCAAAGAAG
TGAGACATTAGGAGGCCCTTCAAGGGACTGGATCGGTATTTATGAGGAATGCTCCAAAAT
TTTATATGAAGAAATTGATTACATTAATGAAGGAAAGAACGCAGACAGGTTTCGACGGGA
TTTCAGAAATATAAAGTGGGTTCGCGTGCCACTTATCATGTGGGACTACACAACTGAAAA
GGTGTTAACCCTGGAGTATGTCCCTGGTATTAAAATAAACAATTTGGATGTTCTTGACAA
CCGGGGCTATAGTCGCTCACTAATTGCATCACGTGCAATAGAATCTTACCTAATTCAGAT
ATTGAAGACTGGCTTCTTCCATGCTGATCCTCATCCTGGAAACCTTGCTGTAGACAAGGA
TGGTTCTCTAATATATTACGATTTTGGAATGATGGGTGATATAAAGTCGTTCACTCGGGA
GAGATTACTTTCCCTATTTTATTCTGTGTATGAGAAGGATGCAAACAAGGTTATGAAAGC
TCTGATTGATTTGGAAGCTCTCCAGCCGACAGGAGATCTCTCACCGGTTAGGAGGTCCAT
ACAATTTTTCTTGGATAATCTGTTGAACCAGACACCAGATCAGCAACAGACTCTGGCCGC
AATTGGAGAGGACTTATTTGCCATAGCACAAGATCAACCTTTTCGGTTTCCATCCACATT
TACATTTGTTATAAGGGCATTCTCTACTCTTGAAGGCATTGGATACATATTAGATCCAGA
ATTTTCGTTTGTCAAAGTTGCAGCACCATATGCGCAGGAACTGTTAGACTTGAAACAGAG
ACAACAACGTGGACCTGCATTGGTCCAGGAGATAAGGAAGCAAGCAAATGATGCCCGTGA
TTCTACCATATCAATGCCCTACAGAATACAGAGAATTGAAGATTTTGTAGGACAACTTGA
GTCAGGCGATCTGAAACTCAGGGTCAGGGTACTGGAGTCAGAACGTGCTGCACGTAAAGC
TACTGTTCTTCAGATGGCAACCATGTATACAGCCTTGGGTGGTACTCTCTTGAATGTTGG
GGTCACACTGAATACTCAAGGGAACCAAATAATTGCAAACGGCTCTTTCATTGGCGCAGG
AATATTTTTGGCATTGCTGGTCAGATCTATGCAAAGAGTGAAGAAACTCGACAAATTTGA
GACCATGATATGATCATTTCATTTTGTAAAGACAGTGCAATCGCCGGATTTACATGGGAG
CTGCGCGTCCCTTCGAGGTTGTCGATAGCCTATACGTAGTGTATATGTATATAGTAAATG
TCATTCTTTCTGGGAACAACCTAACGTGTTGCTCCTGTAAATCTGTACAGACTGTATCAT
TCTTTAGCCCGTAAAAGGCTAAGCATACCGATCATCAAGCAGTCGACAAAACAAGGAAAT
CAAGATAGCTGTAACATACACTACACTAAAATTATACTGCCTTCAATCCTTCAGTCTTGA
AATACTAGGGCCTTGGATATATTCTCACCATGGAGAAAAGCAATTAATTAGAGTACTACT
ACATTCAGGCAAAGCAAAAGCAACATCAAACTACTCTACTACGGAGTAGTTATTTGTCTT
GTCTGAGACGAAAGCTTTTGTTGACTAGTATTTCCCTATTGTACCTTTATTGTTAAATAT
AAATACTCCACAACAAGAAAATCAGGTGTTTTAGTTTGGTTC