Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU92014
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:53454226:53457346:1 gene:SORBI_3001G275500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAAGCGGCCGACGAGGAGAACGCTTTGCTGCTTCATCTCCAACCTACTCCGCAGGCT
GTAGCCTCGGAGTACGCAAGTGATGGATCAGTTGACATCAACAAACAACCTGCTCTCAAG
CACAGTACGGGGAACTGGAGGGCATGCTATACCATCTTAGGTGTTGGATTCAGTGAGTGC
ATGGTGTTCTCTGCAATCGCGACGAATTTGGTGACCTTACTCACCACTGTGCTCCACGAG
AGCAAGGTGGATGCAGCCAGAAATATCTCCTCCTGGGCCGGAGTGTGCTACCTCACACCA
CTTCTTGGGGCTTTCGTCGCTGACAGTTACTTGGGAAGATACTGGACCATGGTCGTATTC
CTCCCAGTCTACATCGTGGCAATGCTCGTCCTGATAGCTTCAGCATCACTACCAACGTTG
TTCCACAGCGATGTTCACCCTGCAGTGGTTTACCTTGGTCTCTACCTTGCCGCCATTGCC
AGCGGCGGTGTGAAGCCCTGCATCTCTGCCTTCGGGGCTGACCAATTTGACGTCAATGAC
CCGGTGGAGCTGGTGAAGAAGGGCTCCTTCTTCAACTGGTACTTCTTCCTGACCACCACC
AGCTCCCTGCTGTCTGGGACCGTCATTGTTTGGCTGCAGGACAACGTTGGGTGGGCAGTC
AGCTACGTGATACCGACAGTGCTCATGCTCATCTGTTTCCCTGCATTTTTAGCTGGCTCC
AGGGTATACAGGTTTAGGAAAATGGGAGTAAGCCCTCTTACCAGCATACTTCAAGTGGTT
GTTGCTGCTGTCAGGAAGTGGCATGTCAAACTGCCGGATGATAGCTCGCTTCTATATGAG
CAGGCCAGTTCACCTTCTACAACTGAACATAAGAACAAGCATACCAATCAGTTCAGGTTC
TTTGACAAGGCTGCCATTGTCCCATCGGGCAACGAATCCACGGCGCAGTCGAGTCCATGG
AGGCTCTGCACAGTGACACAGGTCGAGGAGCTAAAGATGCTGCTCTCGACGCTCCCAACC
TGGGCGTCGTTCTTGGTCTTCTACGCAGTCACGGCTCAGATGCAGTCGACGATGATCGAG
CAAGGCATGCTCATGGATAACCACGTTGGCTCGTTTGCCATCCCACCGGCATCCATGCCC
ATCATTGGTGTGCTCAGCTTCCTCATCTGTGTCGCCGTCTATGAAACCATCCTGGTGCCA
CTAGCGCGGCGCTTCACCGGGAACGAGAAAGGCTTCTCCCAGTGGCAGCGCCTTGGAATC
GGCCAAGCTCTGTCCATCCTGACAATGGCGCTCGCTGCTTTGCTGGAGACAAGGAGGCTG
GAGATCGCGGAAGCCAACGGCCAGGAGGTGCCGGTGCCAATGAGCATCCTGTGGCAGGGC
CCAGTTTTCTTTGTGCATGGTGCGGCCGAGATGTTTGGTTCCATTGGCATGACCGAGTTC
TTCTATGACCAAGCCCCGGTGACCATGAAGAGCCTGTGCGCAGCGTTCGGGCAGCTCGCG
ATCGCTTCCGGGTCTTACCTCAACACAGCCGTGCTCAGCGTCGTCGCATTCGGCACAACA
CGCGGCGGCGAAACCGGATGGATTCCAGACAACCTCAACGAAGGCCATCTCGACTATTTC
TTCTGGATGATGGCAGCTCTTAGCTTGCTCAACTTAGCTCTGTTTGTGCGTTACTCAATG
AGGCAAAGAGGCAAGGAAACTTAA

Peptide Sequence

PEP ID

OQU92014
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:53454226:53457346:1 gene:SORBI_3001G275500 transcript:OQU92014 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEAADEENALLLHLQPTPQAVASEYASDGSVDINKQPALKHSTGNWRACYTILGVGFSEC
MVFSAIATNLVTLLTTVLHESKVDAARNISSWAGVCYLTPLLGAFVADSYLGRYWTMVVF
LPVYIVAMLVLIASASLPTLFHSDVHPAVVYLGLYLAAIASGGVKPCISAFGADQFDVND
PVELVKKGSFFNWYFFLTTTSSLLSGTVIVWLQDNVGWAVSYVIPTVLMLICFPAFLAGS
RVYRFRKMGVSPLTSILQVVVAAVRKWHVKLPDDSSLLYEQASSPSTTEHKNKHTNQFRF
FDKAAIVPSGNESTAQSSPWRLCTVTQVEELKMLLSTLPTWASFLVFYAVTAQMQSTMIE
QGMLMDNHVGSFAIPPASMPIIGVLSFLICVAVYETILVPLARRFTGNEKGFSQWQRLGI
GQALSILTMALAALLETRRLEIAEANGQEVPVPMSILWQGPVFFVHGAAEMFGSIGMTEF
FYDQAPVTMKSLCAAFGQLAIASGSYLNTAVLSVVAFGTTRGGETGWIPDNLNEGHLDYF
FWMMAALSLLNLALFVRYSMRQRGKET

Transcript Sequence

Transcript ID

OQU92014
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:53454226:53457346:1 gene:SORBI_3001G275500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TAAGCTCCTCGTCAGATTCCACTGCTTCTTCCACTTCACAAATATCCTCCTCAAATAACT
TTTTCCTTTTTTTCTCTGTTATTTTTCGACATATGTTAATACTTTCTTCAGCTTGCACGC
AAAGTATTGTGCATGGAAATTTTGCTGAAGCCTGCTTTCCCTGCAGCTCACTGACAGAGT
AACTGATAGAGGAGCAGCTCCGCCGGAGCCAGGAGCTTTCTATATGGAAGCGGCCGACGA
GGAGAACGCTTTGCTGCTTCATCTCCAACCTACTCCGCAGGCTGTAGCCTCGGAGTACGC
AAGTGATGGATCAGTTGACATCAACAAACAACCTGCTCTCAAGCACAGTACGGGGAACTG
GAGGGCATGCTATACCATCTTAGGTGTTGGATTCAGTGAGTGCATGGTGTTCTCTGCAAT
CGCGACGAATTTGGTGACCTTACTCACCACTGTGCTCCACGAGAGCAAGGTGGATGCAGC
CAGAAATATCTCCTCCTGGGCCGGAGTGTGCTACCTCACACCACTTCTTGGGGCTTTCGT
CGCTGACAGTTACTTGGGAAGATACTGGACCATGGTCGTATTCCTCCCAGTCTACATCGT
GGCAATGCTCGTCCTGATAGCTTCAGCATCACTACCAACGTTGTTCCACAGCGATGTTCA
CCCTGCAGTGGTTTACCTTGGTCTCTACCTTGCCGCCATTGCCAGCGGCGGTGTGAAGCC
CTGCATCTCTGCCTTCGGGGCTGACCAATTTGACGTCAATGACCCGGTGGAGCTGGTGAA
GAAGGGCTCCTTCTTCAACTGGTACTTCTTCCTGACCACCACCAGCTCCCTGCTGTCTGG
GACCGTCATTGTTTGGCTGCAGGACAACGTTGGGTGGGCAGTCAGCTACGTGATACCGAC
AGTGCTCATGCTCATCTGTTTCCCTGCATTTTTAGCTGGCTCCAGGGTATACAGGTTTAG
GAAAATGGGAGTAAGCCCTCTTACCAGCATACTTCAAGTGGTTGTTGCTGCTGTCAGGAA
GTGGCATGTCAAACTGCCGGATGATAGCTCGCTTCTATATGAGCAGGCCAGTTCACCTTC
TACAACTGAACATAAGAACAAGCATACCAATCAGTTCAGGTTCTTTGACAAGGCTGCCAT
TGTCCCATCGGGCAACGAATCCACGGCGCAGTCGAGTCCATGGAGGCTCTGCACAGTGAC
ACAGGTCGAGGAGCTAAAGATGCTGCTCTCGACGCTCCCAACCTGGGCGTCGTTCTTGGT
CTTCTACGCAGTCACGGCTCAGATGCAGTCGACGATGATCGAGCAAGGCATGCTCATGGA
TAACCACGTTGGCTCGTTTGCCATCCCACCGGCATCCATGCCCATCATTGGTGTGCTCAG
CTTCCTCATCTGTGTCGCCGTCTATGAAACCATCCTGGTGCCACTAGCGCGGCGCTTCAC
CGGGAACGAGAAAGGCTTCTCCCAGTGGCAGCGCCTTGGAATCGGCCAAGCTCTGTCCAT
CCTGACAATGGCGCTCGCTGCTTTGCTGGAGACAAGGAGGCTGGAGATCGCGGAAGCCAA
CGGCCAGGAGGTGCCGGTGCCAATGAGCATCCTGTGGCAGGGCCCAGTTTTCTTTGTGCA
TGGTGCGGCCGAGATGTTTGGTTCCATTGGCATGACCGAGTTCTTCTATGACCAAGCCCC
GGTGACCATGAAGAGCCTGTGCGCAGCGTTCGGGCAGCTCGCGATCGCTTCCGGGTCTTA
CCTCAACACAGCCGTGCTCAGCGTCGTCGCATTCGGCACAACACGCGGCGGCGAAACCGG
ATGGATTCCAGACAACCTCAACGAAGGCCATCTCGACTATTTCTTCTGGATGATGGCAGC
TCTTAGCTTGCTCAACTTAGCTCTGTTTGTGCGTTACTCAATGAGGCAAAGAGGCAAGGA
AACTTAAGATAAGAGGCACTGAGCAAGACATTGGTTTATTATAATTCAGGAAAATATGAA
CAAGGCAGACCATGGAAGAAGCTATATATATGGACAAATTACTCATAAATAGTAGCATTG
TACAGTGGGGCGCTGGGAACCAATACTGGAGAAGTGGCCAAGGCACCCAGGCCCAAGAGA
CTCCTCAAGCCCAATACCAATTACCAAAGTTTACCAGAGTAACTATATATGATGAGAGGA
GTGTGGAGAGAGAACATATGAAAATTTGTATCCAAAACTCGAACCAATATTCAGCACTGT
CCTCTGCCGAATCTCTCTTTTTTTCTCTCTCTATCC