Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU91893
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:34535577:34537961:-1 gene:SORBI_3001G261456 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGACGCTCAGCCTCCGCCGCAAGCAGCTCGATGTTATCGTGCGGATGCTGCACCTGAGC
CAGCAGCAGTTGTCGAACGCCGGCGAGGGGCAGGGGGAGGACGATGCGTACAAGATCCTG
GTGATGGATCAGCCCTGTATCTCCGTCCTCTCGCCGGTGCTCAAGCTCGGCGACCTCCGC
CACCACGGTGTCACCCTCACCCTCAACATCGACCGTCCGCGGCAGGCGGTGCCCGATGCG
CCGGCCGTCTACTTCGTCCGGCCCACCCCCGGAAACGTGGACCGCCTAGCGGCCGACGCC
GCCGCGGGGCTATACGGGTCTTTCCATGTCAACTTCTCCACCTCCGTCCCGCGATCGCTG
CTTGAGCGCCTCGCAACCGCCTGCGCCGCCGCTCCGCCCGCGTGTGCGGGCCGCGTGGCG
CGCGTTGCTGACCAGTACATCGACTTCGTCTGCCTCGAGGATGGCCTCTTCTCGCTAGCG
CAGCCCCGGGCCTACGTCGCACTAAACGACCCCGCGGCTGCCGACACTGACATCACTGCC
CTCGTCGACGCCGTCGCGCTGGGTCTCTTCTGCGTCGTCGTCACGCTTGGTGTTGTGCCT
GTCATCAGGTGTGCGCGCGGTGGGCCAGCGGAGATGGTGGCCGGCGCCCTAGACGCCCGG
CTCCGCGATCACCTACTCGCCAAGCCCAACCTCTTCACGGAAGCTGCATCTGCCGCCGTC
GCGTCATTCCAGCGCCCTGTGCTGTGCCTCTTCGACAGGAATTTCGAGCTGTCTGTTGGG
GTGCAGCACGACTGGAGCTACCGCCCGTTGGTGCATGATGTGCTTGGCTTGAAGCAGAAC
ATTCTGAAGTTGCCGGCAGAGAAGTACGAATTGGACGACTCTGACAAATTCTGGGTGGCA
AACAGCTGGTCTCCATTCCCCAAAGTTGCTGAGGAAATCGAGGCGCAGCTGGCCAAGTAC
AAGCAGGATGTGGATGAAGTGAACCATCGCACTGGTGGTGGCAAGGTTGGGGCTGAGTTT
GATGGTACTGATCTGATTGGCAACACTAAGCATCTCATGAATGCGGTGAACTCACTACCA
GAACTGACAGAGCGGAAGAAGATGATTGATAAGCACACCAATATTGCAACATCATTGCTT
GGGCATATCAAGGAGAGGTCTCTGGATGGATACTGCGACTGTGAGAATGATATGCTTGTG
AATGGTACTGTTGACCGGAATACACTGCTGAGTCTCCTCAGAGGGAAGGGCACTAAGGAA
GATAAGCTTCGGCTAGCTGTGACCTACCTGCTGTCCTTCGAGACACCACCATCATCTGAA
CTGGAGCAGGTTGAGGCCACTCTGCGGGAATCCGAAGTTGACATGTGTGCATTTCAGTAT
GTAAAGAGGATAAAGGCATTGAATACCCAATTTGCAGCTGCTTCAGGCACAGCAACTAAG
AGCAACATTGTCGATTGGGCAGAGAAGCTGTATGGGCAGTCCATTAGCGCTGTGACTGCA
GGTGTAAAGAATCTCTTGTCAGATGGGAGGCAGCTGGCCTTGACAAGAACAGTTGAAGCT
CTGATGGAAGGGAAACCAAACCCAGAGGTGGATGACTACCTTTTGTTTGATCCACGGGCT
CCTAGGTCAGGAACTGGTGGGCAGTTTAAAGGACCCTTCAGAGAAGCTGTTGTTTTCATG
ATCGGTGGTGGAAATTACATTGAGTACAAGAGCTTGATGGAGCTAGTGCAACACTCACAG
CCTTCCAAGCATGTTATTTATGGTGCAACAGAAATTCTGAGTGGGTCCGAGTTTATTCAC
CAACTGGCAGAATTGGGGCAGAAAGCCGGATTGGGTGGTGGCAGCAGCAACATACCACTA
GGTTCAGCACAATAG

Peptide Sequence

PEP ID

OQU91893
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:34535577:34537961:-1 gene:SORBI_3001G261456 transcript:OQU91893 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MTLSLRRKQLDVIVRMLHLSQQQLSNAGEGQGEDDAYKILVMDQPCISVLSPVLKLGDLR
HHGVTLTLNIDRPRQAVPDAPAVYFVRPTPGNVDRLAADAAAGLYGSFHVNFSTSVPRSL
LERLATACAAAPPACAGRVARVADQYIDFVCLEDGLFSLAQPRAYVALNDPAAADTDITA
LVDAVALGLFCVVVTLGVVPVIRCARGGPAEMVAGALDARLRDHLLAKPNLFTEAASAAV
ASFQRPVLCLFDRNFELSVGVQHDWSYRPLVHDVLGLKQNILKLPAEKYELDDSDKFWVA
NSWSPFPKVAEEIEAQLAKYKQDVDEVNHRTGGGKVGAEFDGTDLIGNTKHLMNAVNSLP
ELTERKKMIDKHTNIATSLLGHIKERSLDGYCDCENDMLVNGTVDRNTLLSLLRGKGTKE
DKLRLAVTYLLSFETPPSSELEQVEATLRESEVDMCAFQYVKRIKALNTQFAAASGTATK
SNIVDWAEKLYGQSISAVTAGVKNLLSDGRQLALTRTVEALMEGKPNPEVDDYLLFDPRA
PRSGTGGQFKGPFREAVVFMIGGGNYIEYKSLMELVQHSQPSKHVIYGATEILSGSEFIH
QLAELGQKAGLGGGSSNIPLGSAQ

Transcript Sequence

Transcript ID

OQU91893
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:34535577:34537961:-1 gene:SORBI_3001G261456 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGACCATGGGCCATGCTTTGCATCGAAGCATCCCGGGGAGCAAATCAACGGTTACAATTG
GATAGTCGCACAACGCACATCTGGTGGCTCCCTGCTCCAGTTTTCTACGCCCCCTCCAGA
TCCGATCTGATCCACGCCGGCGAGACACCGGAGGACCGCCATGACGCTCAGCCTCCGCCG
CAAGCAGCTCGATGTTATCGTGCGGATGCTGCACCTGAGCCAGCAGCAGTTGTCGAACGC
CGGCGAGGGGCAGGGGGAGGACGATGCGTACAAGATCCTGGTGATGGATCAGCCCTGTAT
CTCCGTCCTCTCGCCGGTGCTCAAGCTCGGCGACCTCCGCCACCACGGTGTCACCCTCAC
CCTCAACATCGACCGTCCGCGGCAGGCGGTGCCCGATGCGCCGGCCGTCTACTTCGTCCG
GCCCACCCCCGGAAACGTGGACCGCCTAGCGGCCGACGCCGCCGCGGGGCTATACGGGTC
TTTCCATGTCAACTTCTCCACCTCCGTCCCGCGATCGCTGCTTGAGCGCCTCGCAACCGC
CTGCGCCGCCGCTCCGCCCGCGTGTGCGGGCCGCGTGGCGCGCGTTGCTGACCAGTACAT
CGACTTCGTCTGCCTCGAGGATGGCCTCTTCTCGCTAGCGCAGCCCCGGGCCTACGTCGC
ACTAAACGACCCCGCGGCTGCCGACACTGACATCACTGCCCTCGTCGACGCCGTCGCGCT
GGGTCTCTTCTGCGTCGTCGTCACGCTTGGTGTTGTGCCTGTCATCAGGTGTGCGCGCGG
TGGGCCAGCGGAGATGGTGGCCGGCGCCCTAGACGCCCGGCTCCGCGATCACCTACTCGC
CAAGCCCAACCTCTTCACGGAAGCTGCATCTGCCGCCGTCGCGTCATTCCAGCGCCCTGT
GCTGTGCCTCTTCGACAGGAATTTCGAGCTGTCTGTTGGGGTGCAGCACGACTGGAGCTA
CCGCCCGTTGGTGCATGATGTGCTTGGCTTGAAGCAGAACATTCTGAAGTTGCCGGCAGA
GAAGTACGAATTGGACGACTCTGACAAATTCTGGGTGGCAAACAGCTGGTCTCCATTCCC
CAAAGTTGCTGAGGAAATCGAGGCGCAGCTGGCCAAGTACAAGCAGGATGTGGATGAAGT
GAACCATCGCACTGGTGGTGGCAAGGTTGGGGCTGAGTTTGATGGTACTGATCTGATTGG
CAACACTAAGCATCTCATGAATGCGGTGAACTCACTACCAGAACTGACAGAGCGGAAGAA
GATGATTGATAAGCACACCAATATTGCAACATCATTGCTTGGGCATATCAAGGAGAGGTC
TCTGGATGGATACTGCGACTGTGAGAATGATATGCTTGTGAATGGTACTGTTGACCGGAA
TACACTGCTGAGTCTCCTCAGAGGGAAGGGCACTAAGGAAGATAAGCTTCGGCTAGCTGT
GACCTACCTGCTGTCCTTCGAGACACCACCATCATCTGAACTGGAGCAGGTTGAGGCCAC
TCTGCGGGAATCCGAAGTTGACATGTGTGCATTTCAGTATGTAAAGAGGATAAAGGCATT
GAATACCCAATTTGCAGCTGCTTCAGGCACAGCAACTAAGAGCAACATTGTCGATTGGGC
AGAGAAGCTGTATGGGCAGTCCATTAGCGCTGTGACTGCAGGTGTAAAGAATCTCTTGTC
AGATGGGAGGCAGCTGGCCTTGACAAGAACAGTTGAAGCTCTGATGGAAGGGAAACCAAA
CCCAGAGGTGGATGACTACCTTTTGTTTGATCCACGGGCTCCTAGGTCAGGAACTGGTGG
GCAGTTTAAAGGACCCTTCAGAGAAGCTGTTGTTTTCATGATCGGTGGTGGAAATTACAT
TGAGTACAAGAGCTTGATGGAGCTAGTGCAACACTCACAGCCTTCCAAGCATGTTATTTA
TGGTGCAACAGAAATTCTGAGTGGGTCCGAGTTTATTCACCAACTGGCAGAATTGGGGCA
GAAAGCCGGATTGGGTGGTGGCAGCAGCAACATACCACTAGGTTCAGCACAATAGGTAGG
AAGCTCTTACCAGACCTTTTGATGTTAAGGAGTGATTCAAGCTTCCGAGATTACAGTAAA
TAGGCTTATACCCATCTTATTTTAAGGAGTGTTCCAGGCATAGATATCAAATTTCATGAA
CTCAAGTTTTTGCCCCTGCGATTGATGATGTCAATACACAGCTTTGTTGGTTCAATTTGG
GTTTTGATATGATCAATTGCCCATGTATGCCTATTTTTACCTGCTGTACTCTATTTCCTC
CCTCCCCCC