Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU91724
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:23943807:23952278:1 gene:SORBI_3001G236800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGAGAGATGGAGGATGATACTTTCTATCGTAAGGACAAATATTCTTACTCTGATCAG
TCAACATCATATCTACATGTACAATCTCTTAGGGACTTTCCGACTGAAAAACTTTCTGGA
GAGGTAGTTTTGGTGCGTCTTGATTCTTCACTTATCTGTGGGAAGTTGGGACCATGCAGT
TCCTCACTTGAAAGAGCTTTGCTAACTATCAAATACTTGTGCAAAGCAAGAGCGAAAGTG
GTCATAGCCACCAGTTGGGATACAGTCCAGTCTGATAATCGAGTGATTGAATCAGTTGGT
TCTTTTGCAGAGTATTTGTCATCACTTCTTCATGTACAAGTCATCCCAGTAGATGGTGAG
CCTGGTTTAACATCATTTAAGCAAGAAGAGTGGGCTCAGAACAGTATTATTTTGTTTGAA
AATCTTGTGAACTTCAGAGGAGAAGTTGCTAATTGCAAAGATTTTTCTCAGAAGCTAGCT
TCAGGTGCCACGATATTTGTCAATGATTCTTTCTCACTGTCTCATAAGATTCTTGCATCA
ACTGTCGGTATCACGTGCTTCTGCTATGCGTCTCTTGGTGGTTTCCATTTTGAGGAGGAG
CTTATGCAATTGATAAAGATCACGGACACCACGAGGCGCCCATATATTGCCATTATTGGA
GGCAGTAACTTCTTGAGAAAAGCACCTGCTCTTCAGATGTTAACCTCTCTATGTGATGGG
TTGTTCTTTGTTGGAAAATTATCATTTCAAATAATGAACGGCCTTGGAATGACAGTGCCC
TCTCGATTCATAGAAAGAAGTGCAGTTAAGGAAGTACTACAGATTATTCAAGTTGCTAGG
GATAGGAATATTCCTATTTATTATCCAACAGATCTCTGGTGCTTGAAAAATGATGGCAGT
GAAACATTGGGAGTAATCAGCTCTACTGGACAATTGGCTGGCTGGACACCAGTTGATATA
GGACCATCAACATTGGAGAAAATTTCTTCTATAATTCCATCATATGAGAAGATACTATGG
ATTGGCCCTACAAATTACAATTTAACAGAAACATTTTCAGTTGGTGGAACACAGTTGGGT
GAAATAATGGAAAAGGCAAGCTCCGATAGCTGTGATGTTGTTTTAGTGGGGAGTGCAGCA
TGCAAGGCAATAGAAAGAAAAACAGATTCCTCATCTCAATATGCAGAATTTCAAAATGCC
ACTGTTGTTTGGGAATTCCTCAAAGGAAGAATATTGCCTGGTATAGCAGCATTGGACAAA
TGCTACCCCTACCGGATTCCATGGAGCACTGTCTTCTTTGAACCTACACTACCGTTAGTG
GTTGATATTGGAAGTGGAAATGGTTTGTTTCTTTTTCAAATGGCTAAAAGCTGTGAAAGT
TCAAATTTCCTTGGGCTTGAGATGAACGAAAAGCTTGTTATAAGGTGCCTCCAAGGTATG
ACTTCAGATGAGAAAAGGAACTTTGCCCAAATCCTGACTTCAACAAAGAGCAAAATAGGT
GGAGAATGGTGCGAAGAATGCTCGTTGAAGCTGTCGTCGACCTCCTTCATACCAATGGAC
AGGTTTATCTGCAGTCAGACGTGGAGTCCGTTCTGCTCGTGA

Peptide Sequence

PEP ID

OQU91724
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:23943807:23952278:1 gene:SORBI_3001G236800 transcript:OQU91724 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGEMEDDTFYRKDKYSYSDQSTSYLHVQSLRDFPTEKLSGEVVLVRLDSSLICGKLGPCS
SSLERALLTIKYLCKARAKVVIATSWDTVQSDNRVIESVGSFAEYLSSLLHVQVIPVDGE
PGLTSFKQEEWAQNSIILFENLVNFRGEVANCKDFSQKLASGATIFVNDSFSLSHKILAS
TVGITCFCYASLGGFHFEEELMQLIKITDTTRRPYIAIIGGSNFLRKAPALQMLTSLCDG
LFFVGKLSFQIMNGLGMTVPSRFIERSAVKEVLQIIQVARDRNIPIYYPTDLWCLKNDGS
ETLGVISSTGQLAGWTPVDIGPSTLEKISSIIPSYEKILWIGPTNYNLTETFSVGGTQLG
EIMEKASSDSCDVVLVGSAACKAIERKTDSSSQYAEFQNATVVWEFLKGRILPGIAALDK
CYPYRIPWSTVFFEPTLPLVVDIGSGNGLFLFQMAKSCESSNFLGLEMNEKLVIRCLQGM
TSDEKRNFAQILTSTKSKIGGEWCEECSLKLSSTSFIPMDRFICSQTWSPFCS

Transcript Sequence

Transcript ID

OQU91724
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:23943807:23952278:1 gene:SORBI_3001G236800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TAAGGTAATAATGGATGCTAATTGCTAAATACATGTTTTTTTAGGACTAGCGAGAATAAT
GAGCTGCAGGTCTTGTAGAACTGGATGTTGATCCTTATCATCATGATCATGCTGTTTTCT
TCCATTTCATGTAAAACATATCAGAGAATTGTGCACTGAAACAAACATGGGAGAGATGGA
GGATGATACTTTCTATCGTAAGGACAAATATTCTTACTCTGATCAGTCAACATCATATCT
ACATGTACAATCTCTTAGGGACTTTCCGACTGAAAAACTTTCTGGAGAGGTAGTTTTGGT
GCGTCTTGATTCTTCACTTATCTGTGGGAAGTTGGGACCATGCAGTTCCTCACTTGAAAG
AGCTTTGCTAACTATCAAATACTTGTGCAAAGCAAGAGCGAAAGTGGTCATAGCCACCAG
TTGGGATACAGTCCAGTCTGATAATCGAGTGATTGAATCAGTTGGTTCTTTTGCAGAGTA
TTTGTCATCACTTCTTCATGTACAAGTCATCCCAGTAGATGGTGAGCCTGGTTTAACATC
ATTTAAGCAAGAAGAGTGGGCTCAGAACAGTATTATTTTGTTTGAAAATCTTGTGAACTT
CAGAGGAGAAGTTGCTAATTGCAAAGATTTTTCTCAGAAGCTAGCTTCAGGTGCCACGAT
ATTTGTCAATGATTCTTTCTCACTGTCTCATAAGATTCTTGCATCAACTGTCGGTATCAC
GTGCTTCTGCTATGCGTCTCTTGGTGGTTTCCATTTTGAGGAGGAGCTTATGCAATTGAT
AAAGATCACGGACACCACGAGGCGCCCATATATTGCCATTATTGGAGGCAGTAACTTCTT
GAGAAAAGCACCTGCTCTTCAGATGTTAACCTCTCTATGTGATGGGTTGTTCTTTGTTGG
AAAATTATCATTTCAAATAATGAACGGCCTTGGAATGACAGTGCCCTCTCGATTCATAGA
AAGAAGTGCAGTTAAGGAAGTACTACAGATTATTCAAGTTGCTAGGGATAGGAATATTCC
TATTTATTATCCAACAGATCTCTGGTGCTTGAAAAATGATGGCAGTGAAACATTGGGAGT
AATCAGCTCTACTGGACAATTGGCTGGCTGGACACCAGTTGATATAGGACCATCAACATT
GGAGAAAATTTCTTCTATAATTCCATCATATGAGAAGATACTATGGATTGGCCCTACAAA
TTACAATTTAACAGAAACATTTTCAGTTGGTGGAACACAGTTGGGTGAAATAATGGAAAA
GGCAAGCTCCGATAGCTGTGATGTTGTTTTAGTGGGGAGTGCAGCATGCAAGGCAATAGA
AAGAAAAACAGATTCCTCATCTCAATATGCAGAATTTCAAAATGCCACTGTTGTTTGGGA
ATTCCTCAAAGGAAGAATATTGCCTGGTATAGCAGCATTGGACAAATGCTACCCCTACCG
GATTCCATGGAGCACTGTCTTCTTTGAACCTACACTACCGTTAGTGGTTGATATTGGAAG
TGGAAATGGTTTGTTTCTTTTTCAAATGGCTAAAAGCTGTGAAAGTTCAAATTTCCTTGG
GCTTGAGATGAACGAAAAGCTTGTTATAAGGTGCCTCCAAGGTATGACTTCAGATGAGAA
AAGGAACTTTGCCCAAATCCTGACTTCAACAAAGAGCAAAATAGGTGGAGAATGGTGCGA
AGAATGCTCGTTGAAGCTGTCGTCGACCTCCTTCATACCAATGGACAGGTTTATCTGCAG
TCAGACGTGGAGTCCGTTCTGCTCGTGATGAAAGAGCAGTTCCTCTCCTACAGCAAGGGT
CAGCTTGTCATAGACGGGGTTAGTGGCCACCAGATCGATAACCCGTTCGGCGTGGTATCC
GATTGGGAGCGCCACGTCCTCGCTCGCGGAGCTCCCATGTACAGGACGATGCTAAAGAAA
GTGTGATTGCATTGCCCGTCTGAGAAATTTGAACATTGCATTGTTTTGTCACCATGGCTG
CTTCGGACATGGCCAACGTTCACGGATCCACTCGGTTAGATAAAAGTATCTTTTTTTTGT
TGTTGATAAAACATCATATATGTGGCAAAAATTGTGTGGTTAAATCTTAAGTCGGATTCA
ATC