Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU91706
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:23253002:23260686:-1 gene:SORBI_3001G235000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCAGCCGCGCTCTCCGGCGGTGGCGGAGGCCGCCGGCGCCGGCGCCACCATGGTGCCC
GGCGTGGGCGGGGTCGAGCCGGCCGTCACGCTGGACCAGGTGCCGCGCTGGAGCGACCCG
GACCAGCGCATCTTCCTCGCCTCCGCGTCCGACGAGGCGTCCGCGGAGGGCGCCGGATCC
GAGGCGACCTCCGCGTCCGGCTTCATCTCCTTCTCCGACCCGCTCACGGTCGACGACGAC
GACGGCGCCGGTGCGGGTGGCCGCGCCGGGGCCGCCTCGCGCTTTCCCGTCGACCAGGAG
ATCAACTCCAGGATCTACCTCTGGCGTGGCCAGCCCTGGAACCTCGAGGTCGACGCCGTC
GTCAATTCCACTAACGAGAGCTTGGACGAGGCGCACAGTAGTCCCGGGCTGCACGCTGCT
GCTGGGTCAGGGCTCGCCGAAGAGTGCGCCACCTTGGGAGGTTGCCGAACTGGGATGGCC
AAGATGACCAATGGCTACGATCTGCCTGCAAGGAAGGTCATCCATACTGTGGGCCCTAAA
TATGCTGTCAAGTATCACACAGCTGCAGAGAATGCACTTAGTCACTGCTATCGATCCTGC
TTGGAACTGCTCATTGAGAATGGTCTTGAAAGCATCGCAATGGGTTGTATATACACAGAA
GCTAAAAACTACCCTCGTGAACCAGCTTCTCATGTGGCAATAAGAACTGTTAGACGTTTT
CTGGAGAAGCAAAAAGGCAAAATAGCTGGTGTTGTTTTTTGTACTACATCATCATCTGAT
ACAGAGATATACAAACGATTGCTCCCACTATATTTCCCTCGGGACAAGCAGGAGGAAGAG
ATTGCGATATTAAAGCTCCCAGCTGATGTTGGGGATGAGAATGGTGAGACGGTAATAGAC
GAAAGGAAAATAAGAATAAGACCTTTGCCTGCTGGTGTGGTAGACAGAACAGTGTCTGCA
ACTCTTGTTGATCTTCCTCTTTCTGATTCTGGATCGGCATTGAAAAGGGGTTCTTTCAAG
TTGGATTCATATTTGGATCCTTCGTTTATGTCAATAATTAAAGATCCAGATCTGCGGCGC
AAGGAGCAGTGGGAAAAATCCGCTCAAGCTCAAAAGGGATTTAATTATGCTAGGTTACTT
GGATATGGGGATCTAGGTTGCCCTTCATTATCTTCAGCAGAGGAATACTCACTTCATTCA
CGATACCTCGCTAAAGCAAATTCTCTTAATCTTTCTGAGATTGCTGAAATGAAAATAATT
TATCGTGGTGGAGTTGATATTGAAGGGCGCCCGGTTATGGTTGTTGTTGGTGCACACTTT
CTTCTTCGATGCCTTGATCTTGAACGATTTGTTCTACATGTAGTGAAGGAGTTCGAACCT
TTGATTCAGAAGCCATATACAATTGTATATTTCCACTCCGCAGCATCATTACAACCGCAA
CCAGATTTAGGATTCATGAAGCGGTTACAACAAATACTAGGGCGGAAACATCAGCGCAAC
CTTCATGCAATTTATGTACTCCACCCAACATTGGGTTTGAGAACAGCTGTTTTGGCAATG
CAGATGTTTGTAGATGGAGAGGTCTGGAAGAAAGTTGTATACGTGGATAGGCTTGTGCAG
CTGTTCAGATATGTACCACGCGAGCAACTTACAATTCCTGACTTTGTCTTTCAGCACGAT
CTGGAGGTGAATGGTGGGAGGGGCCTAATTGTTGACCCAAGAACAAAGCACATTTATCAG
AGGACGTCCAGTTGA

Peptide Sequence

PEP ID

OQU91706
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:23253002:23260686:-1 gene:SORBI_3001G235000 transcript:OQU91706 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MQPRSPAVAEAAGAGATMVPGVGGVEPAVTLDQVPRWSDPDQRIFLASASDEASAEGAGS
EATSASGFISFSDPLTVDDDDGAGAGGRAGAASRFPVDQEINSRIYLWRGQPWNLEVDAV
VNSTNESLDEAHSSPGLHAAAGSGLAEECATLGGCRTGMAKMTNGYDLPARKVIHTVGPK
YAVKYHTAAENALSHCYRSCLELLIENGLESIAMGCIYTEAKNYPREPASHVAIRTVRRF
LEKQKGKIAGVVFCTTSSSDTEIYKRLLPLYFPRDKQEEEIAILKLPADVGDENGETVID
ERKIRIRPLPAGVVDRTVSATLVDLPLSDSGSALKRGSFKLDSYLDPSFMSIIKDPDLRR
KEQWEKSAQAQKGFNYARLLGYGDLGCPSLSSAEEYSLHSRYLAKANSLNLSEIAEMKII
YRGGVDIEGRPVMVVVGAHFLLRCLDLERFVLHVVKEFEPLIQKPYTIVYFHSAASLQPQ
PDLGFMKRLQQILGRKHQRNLHAIYVLHPTLGLRTAVLAMQMFVDGEVWKKVVYVDRLVQ
LFRYVPREQLTIPDFVFQHDLEVNGGRGLIVDPRTKHIYQRTSS

Transcript Sequence

Transcript ID

OQU91706
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:23253002:23260686:-1 gene:SORBI_3001G235000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCAGCCGCGCTCTCCGGCGGTGGCGGAGGCCGCCGGCGCCGGCGCCACCATGGTGCCC
GGCGTGGGCGGGGTCGAGCCGGCCGTCACGCTGGACCAGGTGCCGCGCTGGAGCGACCCG
GACCAGCGCATCTTCCTCGCCTCCGCGTCCGACGAGGCGTCCGCGGAGGGCGCCGGATCC
GAGGCGACCTCCGCGTCCGGCTTCATCTCCTTCTCCGACCCGCTCACGGTCGACGACGAC
GACGGCGCCGGTGCGGGTGGCCGCGCCGGGGCCGCCTCGCGCTTTCCCGTCGACCAGGAG
ATCAACTCCAGGATCTACCTCTGGCGTGGCCAGCCCTGGAACCTCGAGGTCGACGCCGTC
GTCAATTCCACTAACGAGAGCTTGGACGAGGCGCACAGTAGTCCCGGGCTGCACGCTGCT
GCTGGGTCAGGGCTCGCCGAAGAGTGCGCCACCTTGGGAGGTTGCCGAACTGGGATGGCC
AAGATGACCAATGGCTACGATCTGCCTGCAAGGAAGGTCATCCATACTGTGGGCCCTAAA
TATGCTGTCAAGTATCACACAGCTGCAGAGAATGCACTTAGTCACTGCTATCGATCCTGC
TTGGAACTGCTCATTGAGAATGGTCTTGAAAGCATCGCAATGGGTTGTATATACACAGAA
GCTAAAAACTACCCTCGTGAACCAGCTTCTCATGTGGCAATAAGAACTGTTAGACGTTTT
CTGGAGAAGCAAAAAGGCAAAATAGCTGGTGTTGTTTTTTGTACTACATCATCATCTGAT
ACAGAGATATACAAACGATTGCTCCCACTATATTTCCCTCGGGACAAGCAGGAGGAAGAG
ATTGCGATATTAAAGCTCCCAGCTGATGTTGGGGATGAGAATGGTGAGACGGTAATAGAC
GAAAGGAAAATAAGAATAAGACCTTTGCCTGCTGGTGTGGTAGACAGAACAGTGTCTGCA
ACTCTTGTTGATCTTCCTCTTTCTGATTCTGGATCGGCATTGAAAAGGGGTTCTTTCAAG
TTGGATTCATATTTGGATCCTTCGTTTATGTCAATAATTAAAGATCCAGATCTGCGGCGC
AAGGAGCAGTGGGAAAAATCCGCTCAAGCTCAAAAGGGATTTAATTATGCTAGGTTACTT
GGATATGGGGATCTAGGTTGCCCTTCATTATCTTCAGCAGAGGAATACTCACTTCATTCA
CGATACCTCGCTAAAGCAAATTCTCTTAATCTTTCTGAGATTGCTGAAATGAAAATAATT
TATCGTGGTGGAGTTGATATTGAAGGGCGCCCGGTTATGGTTGTTGTTGGTGCACACTTT
CTTCTTCGATGCCTTGATCTTGAACGATTTGTTCTACATGTAGTGAAGGAGTTCGAACCT
TTGATTCAGAAGCCATATACAATTGTATATTTCCACTCCGCAGCATCATTACAACCGCAA
CCAGATTTAGGATTCATGAAGCGGTTACAACAAATACTAGGGCGGAAACATCAGCGCAAC
CTTCATGCAATTTATGTACTCCACCCAACATTGGGTTTGAGAACAGCTGTTTTGGCAATG
CAGATGTTTGTAGATGGAGAGGTCTGGAAGAAAGTTGTATACGTGGATAGGCTTGTGCAG
CTGTTCAGATATGTACCACGCGAGCAACTTACAATTCCTGACTTTGTCTTTCAGCACGAT
CTGGAGGTGAATGGTGGGAGGGGCCTAATTGTTGACCCAAGAACAAAGCACATTTATCAG
AGGACGTCCAGTTGATATGTGCTGGTTCTGAGGCCTGAAGTTTGTTAGTTCTTGCACTGT
ACCATTCTAATGTTCATTCTTGTAACTGTATTCCATGTATTTCTTTCTGTATCTAGTTAA
GTTAGTTTATTCCATTCGTTCATTCTCCTGCCTTCCGCAAGGGGATTCTCATCTGTATCT
GTTGATATGTAGAACTGAATAAAAGTGGTGTTTACTCTAGATGTTTGTGTTTTGCTTATC
CTGTACAAATTTTGGCAGTTGATATGTTCAAGTTTATTTCAAAGTTTCATCCCTTCTATT
TTTTTTTCTGCGTATAAGTTCTGAATCATGATTTTTCCAAGTGATACCTAACTGGCATTA
AATAATGGTCTTGTTTGAGTGCTTGAACTTCAGCTTACAGAACAACAGAAAACTTCGGAA
AGTACAAGCCACCCCAGTACCGAAGAGTTGAAGCTTCTCTCAACAGGCTTCTCAGCTAAA
GTTAAATCCTAAAGTATGGATATTTCATGACAAGGTAATTTTTCTTAGTCATCCAAAATG
TATTTGGTTTGTTACGCTGTTGTGGAGACTAGGCATTTTGGGTTCACAATTAGTTCAAAT
AAAAAAGGGAATGGAAAATTGCAAAATCCATCTAGGGTTCCACTTTTTTTATAAAAAAGG
AAAATGACCACATAAAGTTTATTTCCTTTCTCTGATGACTTCCAGTTTTGTGTTCTCAAA
TACCGCCTGCCCCTTGTGCTAGATAACAGCAAATTAGCTCAAACATAGTAACATGCATCG
TGCTGTCAAGATACCAAGCAAGCTAAGCTCAATCAATGGCCTACCTTGTGAGAGACTGAT
TCATGACCCATAGAAAGCTTGATATTTGAGTTGATGTTGTGTTAGGGAAGTCAAGTGCAG
CAAGTGCTAAAGAATGTTTTCTAGCTACATATTCTAACTAAAGTTGTGCCATAATTTCTT
TGTCAGGTACTCAGGTGTATGAACCATCGACACATTTGTTTTATATATAGTAATATAGGT
GATGTCATAGTTGATGTCTACTCTCTTCGCGAAACAATCAGTTTAAGTTTTCAAAGTAAT
AATCTCTTGTTATAGGTTCGGTAGTTCCACAAAATTGATATACTGTATCAGCAATTCAGC
ATGTTTTCAAGCATGTCTACTCTATCTCTATTTGTACGCACCGTAAGGGACAAATAAAAT
GAACAACATACGTACTGCCGAATAGGTGTGCCAGAGAGCACAGAGTTATCTAAGAATTTC
ATTTACATTTTGTCAGATATTGACGAAACGGTGGCCGTTTGTTTTTGTTTAGTTGCGGAA
AGCTGATGAGCAGGCCAGGCAAGTAGGCGAAGCATATTCGCTCATAAACAGTCACTTCGG
CTCATCAGCAGCCACACGACTATGATCGGACGGTTCGCACAACACGGCTGGAAGAAACGG
AATCGTTCTCTGCACATTACAAATGGCGTTTGATGTGTGTTCAAGTTCGTGCTGACGCAC
TTGTTATGATACTTGGAACGCGGCATTGGCTATAGTTGACTAGGATTATATAAAGCCCAG
GTGATGCTAGTTAGTAAGAGCATCGACATCAGGTATATTCCTAGGATAAACCTTGCCTAT
TAGTGATGCAATCCCGACAGTGTCGCTTAATACTTTTCCATTCTTGTTCAAACGCTGAAA
GTCGCCTCTTTGCATCTTGTGCAATTTCCCTCCCAAAGGTGCGCAATTCTGATTTTGTTT
CATGATGATGTTTGGTTATTATTAGAAGACCATAGTAGCTCTGAGAAATTTAGAGTTGTT
GCATAACTGCAGTTGTGCCGAAAAACGCATAACAGCAGTTCGTAAGAAAGATAAACCTTT
TGCAGCAGTTCTCTAGAGATTCCATTCAGTTCACCTTTTGTTCTTCAGAAAGATACACCT
TTCTCAAATTACAGGTGACATGTAGTCCCTTTCTATCTATGCTGCTTGGCAAGATGAGTT
TCACCTACTCAGAAGTCACATGTAAATTACTAGCTAAAGAGCATCTTTACTTACCTGCAA
CACATGATTACCGTGTGAACGTGCATGCAACTGCTCACTAATCTATCCATCTAACCACCA
TTGACAATGACAGGTTTATAAAAAAAACATCTTTCTCAGTTTAAGCCCCAGTTTTAAATC
GAGTTTTCGCTTTCATCGACTAAGGTTTTCCTTCAATAATTCCAGTATGTCCCAAGAAAA
GGCAGCAACATAGTATGTCCCTAGTTTTGCGGAGGAACTTCAGACTGAACCCCAACTCTA
GATAGCAAGTCCGCAAAGTGAGAGCTCACTCTCTGATACCGAGCCCAAGGTTTTCTTTTT
CGGTAGAAATTTTTTTTTGGCACCTACCAATAAATAAGAAATTTCG