Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU91458
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:15779994:15783571:1 gene:SORBI_3001G184300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGATTCCTTCTTCTGCTCCAGGTGGAACTTTCGCGCTCTACACTCTGATCTCGCGCCAC
GCCAGGGTGAGCCTGATCCCGAACCAGCAGGTTGAAGACGAGCTCGTCTCCAAGTACAAC
CGCGACAAACCGCCGGCGACGCTGCAGAGAGCGGAGTGGATGAAGGAGCTGCTCGAGACG
AACAAGACTGTAAAGATCTCGCTCTTCCTCATCACCATGCTCGCCACCGCCATGGTTATC
AGCGACGCTATTCTGACTCCTGCAATTTCAGTTCTCTCTGCTGTTGATGGCCTAAAAGAA
AAGGCGTCTTTTCTTACAACAGATGAGATAGTCTGGATCACCGTGGGAATTTTGGTGGTG
CTGTTCGCAATCCAGAGGTTCGGGACAGACAGAGTCGGTTACTTGTTTGCGCCGATCATC
CTCCTCTGGCTGCTCCTCATTGCAGGCGTTGGGTTATACAACCTGATAAAGTATGATACC
GGTGCTCTCAGGGCATTCAATATGAAATACATCATCGACTATTTTAGAAGGAACAAGAAA
AAAGGATGGGTTTCCCTTGGAGGCATACTCCTTTGTTTCACAGGCACAGAAGCTCTTTTT
GCTGATCTAGGATACTTCAGCATCAAATCAATCCAGCTAAGCTTTGGTTTCGGTTTAGTC
CCGTCAGTATTACTTGCTTACATTGGGCAAGCAGCATACTTGAGAGTACACCCGGAGGAT
GTGGCTAACACTTTCTACAGATCAACTCCAATCTCGTTGTTCTGGCCAACGTTCATTCTT
GCACTAGCAGCATCGATCATTGGAAGTCAAGCCATGATCTCCTGTGCCTTTGCAACAATT
TCACATTCCCAAACACTTGGTTGCTTTCCAAGGGTAAAGATACTGCACACCTCAAGGCAA
TACTCAGGCCAATTGTATATCCCTGAAGTAAACTACTTGCTGTGCTTGGGTGCTTGCCTT
GTCACAATTGGCTTCAGGACAACCGTCATCATTGGGGAAGCTCATGGTATATGTGTTGTT
CTTGTGATGATCGTCACAACCCTATTGTTGACAATTGTGATGCTCCTAGTATGGAAGATC
AGTATCTGGTGGATTGTTGCATTCTTTGTTGTTTTTATGTCATCTGAGTCAATTTATCTA
TCTGCTATCCTATATCGATTTGCGCATGGGGCATATGTGCCTGTGGCAATGTCAGCATTC
CTGATGGTGGTGATGGTTGTATGGCATTATGTGCATGTGAAGAAATACAACTTTGAGCTC
GAGCACTCTGTGCCCCGTGACAAAGTGAAAGAACTCCTTGAGCGCCGTGACATACAGAGA
GTACCAGGGATTGGCCTCTTCTATACTGAGTTGGTTCAAGGCATACCCCCTGTGTTCCGT
CATCTCATCGAGAAGATCCCTTCCATCCATTCAGTGCTCATTTTCGTCTCAATGAAGCAC
TTACCAATTCCATCTGTCGACATGTCAGAGCGCTTTCTCTTTAGACAGGTAGACAGAGAA
GACTATAAGGTATTCCAATGTGTGGCACGGTATGGGTACCGAGACCCCTTTGAGGAGGCC
AAGGACTTCGTTGATAAACTTGTAGAGCATCTTCAGTACTACATCCGGGATGTCAACCTC
TATGGTGTGGGTTGTGAGCCAATGATGAAGCAGTCCTCTAGCTACCGCAGTTCCCGTGCT
GAGAGCTTTAGCAGCCATGAAAAAACCAAAGTAAAGGCAGTCTATGCTGAGGAGATGCTC
ACACCAGCAGAGTCATTTTCGGAGCACGCAAGGCAAGCTAGTGGAAAGAGCAAGCATTTT
GCACAATTTCAGGGAGACAAGATGAATATAGTAGAGATGCTGAAGATTCAGCAGGAGCAA
CAAGCTGTCCTTGAAGAGATGAGTAAAGGTGTGGTGTACATATTTGGAGAGAGTGAGGTG
GTGGCAAGACCCCATTCCTCACTCATTAAGAAGATAGCTGTCAACTACTTATACTCTTTT
CTTAGAAAGAACTCAAGAAATGGTGAGAAGATGCTGTCAATCCCCCGTCGCCAGATCCTA
AAGGTCGGAATCTCATATGAAATCTAA

Peptide Sequence

PEP ID

OQU91458
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:15779994:15783571:1 gene:SORBI_3001G184300 transcript:OQU91458 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MIPSSAPGGTFALYTLISRHARVSLIPNQQVEDELVSKYNRDKPPATLQRAEWMKELLET
NKTVKISLFLITMLATAMVISDAILTPAISVLSAVDGLKEKASFLTTDEIVWITVGILVV
LFAIQRFGTDRVGYLFAPIILLWLLLIAGVGLYNLIKYDTGALRAFNMKYIIDYFRRNKK
KGWVSLGGILLCFTGTEALFADLGYFSIKSIQLSFGFGLVPSVLLAYIGQAAYLRVHPED
VANTFYRSTPISLFWPTFILALAASIIGSQAMISCAFATISHSQTLGCFPRVKILHTSRQ
YSGQLYIPEVNYLLCLGACLVTIGFRTTVIIGEAHGICVVLVMIVTTLLLTIVMLLVWKI
SIWWIVAFFVVFMSSESIYLSAILYRFAHGAYVPVAMSAFLMVVMVVWHYVHVKKYNFEL
EHSVPRDKVKELLERRDIQRVPGIGLFYTELVQGIPPVFRHLIEKIPSIHSVLIFVSMKH
LPIPSVDMSERFLFRQVDREDYKVFQCVARYGYRDPFEEAKDFVDKLVEHLQYYIRDVNL
YGVGCEPMMKQSSSYRSSRAESFSSHEKTKVKAVYAEEMLTPAESFSEHARQASGKSKHF
AQFQGDKMNIVEMLKIQQEQQAVLEEMSKGVVYIFGESEVVARPHSSLIKKIAVNYLYSF
LRKNSRNGEKMLSIPRRQILKVGISYEI

Transcript Sequence

Transcript ID

OQU91458
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:15779994:15783571:1 gene:SORBI_3001G184300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACAAACAAACAAACAAACAAACAAATTGAACCCCAAGCAAAACTGATGATTCCTTCTTCT
GCTCCAGGTGGAACTTTCGCGCTCTACACTCTGATCTCGCGCCACGCCAGGGTGAGCCTG
ATCCCGAACCAGCAGGTTGAAGACGAGCTCGTCTCCAAGTACAACCGCGACAAACCGCCG
GCGACGCTGCAGAGAGCGGAGTGGATGAAGGAGCTGCTCGAGACGAACAAGACTGTAAAG
ATCTCGCTCTTCCTCATCACCATGCTCGCCACCGCCATGGTTATCAGCGACGCTATTCTG
ACTCCTGCAATTTCAGTTCTCTCTGCTGTTGATGGCCTAAAAGAAAAGGCGTCTTTTCTT
ACAACAGATGAGATAGTCTGGATCACCGTGGGAATTTTGGTGGTGCTGTTCGCAATCCAG
AGGTTCGGGACAGACAGAGTCGGTTACTTGTTTGCGCCGATCATCCTCCTCTGGCTGCTC
CTCATTGCAGGCGTTGGGTTATACAACCTGATAAAGTATGATACCGGTGCTCTCAGGGCA
TTCAATATGAAATACATCATCGACTATTTTAGAAGGAACAAGAAAAAAGGATGGGTTTCC
CTTGGAGGCATACTCCTTTGTTTCACAGGCACAGAAGCTCTTTTTGCTGATCTAGGATAC
TTCAGCATCAAATCAATCCAGCTAAGCTTTGGTTTCGGTTTAGTCCCGTCAGTATTACTT
GCTTACATTGGGCAAGCAGCATACTTGAGAGTACACCCGGAGGATGTGGCTAACACTTTC
TACAGATCAACTCCAATCTCGTTGTTCTGGCCAACGTTCATTCTTGCACTAGCAGCATCG
ATCATTGGAAGTCAAGCCATGATCTCCTGTGCCTTTGCAACAATTTCACATTCCCAAACA
CTTGGTTGCTTTCCAAGGGTAAAGATACTGCACACCTCAAGGCAATACTCAGGCCAATTG
TATATCCCTGAAGTAAACTACTTGCTGTGCTTGGGTGCTTGCCTTGTCACAATTGGCTTC
AGGACAACCGTCATCATTGGGGAAGCTCATGGTATATGTGTTGTTCTTGTGATGATCGTC
ACAACCCTATTGTTGACAATTGTGATGCTCCTAGTATGGAAGATCAGTATCTGGTGGATT
GTTGCATTCTTTGTTGTTTTTATGTCATCTGAGTCAATTTATCTATCTGCTATCCTATAT
CGATTTGCGCATGGGGCATATGTGCCTGTGGCAATGTCAGCATTCCTGATGGTGGTGATG
GTTGTATGGCATTATGTGCATGTGAAGAAATACAACTTTGAGCTCGAGCACTCTGTGCCC
CGTGACAAAGTGAAAGAACTCCTTGAGCGCCGTGACATACAGAGAGTACCAGGGATTGGC
CTCTTCTATACTGAGTTGGTTCAAGGCATACCCCCTGTGTTCCGTCATCTCATCGAGAAG
ATCCCTTCCATCCATTCAGTGCTCATTTTCGTCTCAATGAAGCACTTACCAATTCCATCT
GTCGACATGTCAGAGCGCTTTCTCTTTAGACAGGTAGACAGAGAAGACTATAAGGTATTC
CAATGTGTGGCACGGTATGGGTACCGAGACCCCTTTGAGGAGGCCAAGGACTTCGTTGAT
AAACTTGTAGAGCATCTTCAGTACTACATCCGGGATGTCAACCTCTATGGTGTGGGTTGT
GAGCCAATGATGAAGCAGTCCTCTAGCTACCGCAGTTCCCGTGCTGAGAGCTTTAGCAGC
CATGAAAAAACCAAAGTAAAGGCAGTCTATGCTGAGGAGATGCTCACACCAGCAGAGTCA
TTTTCGGAGCACGCAAGGCAAGCTAGTGGAAAGAGCAAGCATTTTGCACAATTTCAGGGA
GACAAGATGAATATAGTAGAGATGCTGAAGATTCAGCAGGAGCAACAAGCTGTCCTTGAA
GAGATGAGTAAAGGTGTGGTGTACATATTTGGAGAGAGTGAGGTGGTGGCAAGACCCCAT
TCCTCACTCATTAAGAAGATAGCTGTCAACTACTTATACTCTTTTCTTAGAAAGAACTCA
AGAAATGGTGAGAAGATGCTGTCAATCCCCCGTCGCCAGATCCTAAAGGTCGGAATCTCA
TATGAAATCTAAGGAATGTGGATGAAGAACAGGATATCTGATTGCACACACAACTCTGAT
GCCAAAAAAAGGACTCTGTATTCATTTATTTCATGAAATTAATGTGCTTGATTTACTACA
GCAATGATGGATACAGAACTTTAGTTTTATGCATAAGTGCTTCACTGATATTT