Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU91427
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:15165413:15171385:1 gene:SORBI_3001G179200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCGTGGTGCTCCGCCGAGTCCACCAAGCCGGTCTTCGTCGGGATCTACGGCGCC
GTCCTCGGCGGCTTCGCGGTCTCCGCCCTCTTCTTCCTGCTCTCCTCCTTCTCCACGCTC
TCGGCGCCCACGCTCCCGCTCCCCGCCGCCGCCATCGCCGGGGCCAACCTCTCCGCGCCC
ACTCCCGCCCAGCCCGAGACCATGTACAACCGCCCCATCTGGAAGCCCCCGCCCCGGCGG
GCGCGGATGCCCTCTCCGCGCGCGTTCCGGCTCACCCGCGACATGGTCGCCGCCCGCGCC
CGCGACGGCGTGATCGTCGTCACCTTCGGCAACTACGCCTTCCTCGACTTCATCCTCACC
TGGGTGCGCCACCTCACCGACCTCGGCGTCGACAACCTCCTCGTCGGCGCCATGGACACC
AAGCTGCTCCGGGAGCTCTACTTCCGGGGCGTGCCCGTCTTCGACATGGGCAGCAGGATG
GCCACCGAGGACGCCGGGTGGGGCTCCCCCACCTTCCACAAGATGGGCAGGGAGAAGGTG
CTGCTCATCAACGCGCTCCTGCCTTTCGGGTACGAGCTGCTCATGTGCGACACGGACATG
GTGTGGCTCAAGAACCCATTGCCCTACCTCGCCCGATACCCCGACGCGGATCTCCTCACG
TCCAGCGATCAGGTCATACCCACCGTCACCGACGACAGCCTGGAGAACTGGAGGGAAGTT
ACTGGTGCATTCAACATTGGTATTTTCCATTGGCGACCCACTGAACCTGCTAAAAGGCTG
GCAAAAGATTGGAAAGATTTAGTCATATCTGATGATAAGTTGTGGGACCAGAATGCTTTT
AATGATCTTGTACGCAAAAATTTTGGACAGCCAGTTCAAGGAGGTGATCTTGTATATTCT
TATGATGGGAAACTGAAGCTGGGAGTACTACCGGCAAGTATATTTTGCAGCGGCCATACA
TATTTTGTGCAGGGCATGTATAAGCAGCTTCATTTGGAACCATACGCAGTTCATACTACT
TTTCAGTATGCGGGTACTGAAGGAAAGCGCCATAGATTGCGAGAGGCAATGCTTTTCTTT
GATCAACCATCTTATTATGATTCTCCAGGAGGCTTCCTGTCATTTAAACCTAACATTCCA
AAAAGTTTGCTATTAGACGGTGCTCATACTGTTGAATCTCATTTTGAGTTGGTTAATTAT
CAGCTGAAGCAAATAAGAACTGCACTTGCAGTCGCATCCTTGTTAAAGCGGACACTGGTA
ATGCCTCCATTATGGTGCAGGCTTGATAGAATGTGGTTTGGACATCCTGGAATTTTAGAA
GGAACAATGACCAGACAACCTTTTCTCTGCCCGATGGATCATGTGTTTGAGGTTCATGTT
ATGCTAAAGGACTTGCCCAAGGAAGAGTTTGGTCCACATATTGATTTCAGAGAGTACTCT
TTTCTTGAGAATCCATCATTACCTAAAGAGGTGAAAGATTCGTTACTGGATGTTCAACTC
TGTGATGAGCATAGCTCCAGATGCTCTGCAGTTGATGAAACCGATAAGCACAGACCCTTT
CTTTTACCAAGAAATAGTACTGAAGAAAAGCTGTTGGATTTGTTGTCACCATATAAGGAT
GTCAAAATCATACAATTCTCATCTATGGTTGATGCCTTTGGTGGTTTTGCTGATGCAGCT
GTGGAGAAGAAGTTCCGAAATCGTGTGAAGAGGTATGTGGGCCTATGGTGCTGTGTAGAG
TTCCGTGATATTGGTCACATATATTATGACATGTACTGGGACGAGAAACCAGGGTGGAAG
CCACACCCTCCAGAGACTAGGGAACAGGACCATCCACCTTGGTCATGA

Peptide Sequence

PEP ID

OQU91427
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:15165413:15171385:1 gene:SORBI_3001G179200 transcript:OQU91427 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAWCSAESTKPVFVGIYGAVLGGFAVSALFFLLSSFSTLSAPTLPLPAAAIAGANLSAP
TPAQPETMYNRPIWKPPPRRARMPSPRAFRLTRDMVAARARDGVIVVTFGNYAFLDFILT
WVRHLTDLGVDNLLVGAMDTKLLRELYFRGVPVFDMGSRMATEDAGWGSPTFHKMGREKV
LLINALLPFGYELLMCDTDMVWLKNPLPYLARYPDADLLTSSDQVIPTVTDDSLENWREV
TGAFNIGIFHWRPTEPAKRLAKDWKDLVISDDKLWDQNAFNDLVRKNFGQPVQGGDLVYS
YDGKLKLGVLPASIFCSGHTYFVQGMYKQLHLEPYAVHTTFQYAGTEGKRHRLREAMLFF
DQPSYYDSPGGFLSFKPNIPKSLLLDGAHTVESHFELVNYQLKQIRTALAVASLLKRTLV
MPPLWCRLDRMWFGHPGILEGTMTRQPFLCPMDHVFEVHVMLKDLPKEEFGPHIDFREYS
FLENPSLPKEVKDSLLDVQLCDEHSSRCSAVDETDKHRPFLLPRNSTEEKLLDLLSPYKD
VKIIQFSSMVDAFGGFADAAVEKKFRNRVKRYVGLWCCVEFRDIGHIYYDMYWDEKPGWK
PHPPETREQDHPPWS

Transcript Sequence

Transcript ID

OQU91427
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:15165413:15171385:1 gene:SORBI_3001G179200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CAGAATGTCCCCGGCCCCCACCGCACGCTGACCCCGCCTCCGCCTCCGGCGACCCGGATC
CCCGCCGGCGAAATGGCGGCGTGGTGCTCCGCCGAGTCCACCAAGCCGGTCTTCGTCGGG
ATCTACGGCGCCGTCCTCGGCGGCTTCGCGGTCTCCGCCCTCTTCTTCCTGCTCTCCTCC
TTCTCCACGCTCTCGGCGCCCACGCTCCCGCTCCCCGCCGCCGCCATCGCCGGGGCCAAC
CTCTCCGCGCCCACTCCCGCCCAGCCCGAGACCATGTACAACCGCCCCATCTGGAAGCCC
CCGCCCCGGCGGGCGCGGATGCCCTCTCCGCGCGCGTTCCGGCTCACCCGCGACATGGTC
GCCGCCCGCGCCCGCGACGGCGTGATCGTCGTCACCTTCGGCAACTACGCCTTCCTCGAC
TTCATCCTCACCTGGGTGCGCCACCTCACCGACCTCGGCGTCGACAACCTCCTCGTCGGC
GCCATGGACACCAAGCTGCTCCGGGAGCTCTACTTCCGGGGCGTGCCCGTCTTCGACATG
GGCAGCAGGATGGCCACCGAGGACGCCGGGTGGGGCTCCCCCACCTTCCACAAGATGGGC
AGGGAGAAGGTGCTGCTCATCAACGCGCTCCTGCCTTTCGGGTACGAGCTGCTCATGTGC
GACACGGACATGGTGTGGCTCAAGAACCCATTGCCCTACCTCGCCCGATACCCCGACGCG
GATCTCCTCACGTCCAGCGATCAGGTCATACCCACCGTCACCGACGACAGCCTGGAGAAC
TGGAGGGAAGTTACTGGTGCATTCAACATTGGTATTTTCCATTGGCGACCCACTGAACCT
GCTAAAAGGCTGGCAAAAGATTGGAAAGATTTAGTCATATCTGATGATAAGTTGTGGGAC
CAGAATGCTTTTAATGATCTTGTACGCAAAAATTTTGGACAGCCAGTTCAAGGAGGTGAT
CTTGTATATTCTTATGATGGGAAACTGAAGCTGGGAGTACTACCGGCAAGTATATTTTGC
AGCGGCCATACATATTTTGTGCAGGGCATGTATAAGCAGCTTCATTTGGAACCATACGCA
GTTCATACTACTTTTCAGTATGCGGGTACTGAAGGAAAGCGCCATAGATTGCGAGAGGCA
ATGCTTTTCTTTGATCAACCATCTTATTATGATTCTCCAGGAGGCTTCCTGTCATTTAAA
CCTAACATTCCAAAAAGTTTGCTATTAGACGGTGCTCATACTGTTGAATCTCATTTTGAG
TTGGTTAATTATCAGCTGAAGCAAATAAGAACTGCACTTGCAGTCGCATCCTTGTTAAAG
CGGACACTGGTAATGCCTCCATTATGGTGCAGGCTTGATAGAATGTGGTTTGGACATCCT
GGAATTTTAGAAGGAACAATGACCAGACAACCTTTTCTCTGCCCGATGGATCATGTGTTT
GAGGTTCATGTTATGCTAAAGGACTTGCCCAAGGAAGAGTTTGGTCCACATATTGATTTC
AGAGAGTACTCTTTTCTTGAGAATCCATCATTACCTAAAGAGGTGAAAGATTCGTTACTG
GATGTTCAACTCTGTGATGAGCATAGCTCCAGATGCTCTGCAGTTGATGAAACCGATAAG
CACAGACCCTTTCTTTTACCAAGAAATAGTACTGAAGAAAAGCTGTTGGATTTGTTGTCA
CCATATAAGGATGTCAAAATCATACAATTCTCATCTATGGTTGATGCCTTTGGTGGTTTT
GCTGATGCAGCTGTGGAGAAGAAGTTCCGAAATCGTGTGAAGAGGTATGTGGGCCTATGG
TGCTGTGTAGAGTTCCGTGATATTGGTCACATATATTATGACATGTACTGGGACGAGAAA
CCAGGGTGGAAGCCACACCCTCCAGAGACTAGGGAACAGGACCATCCACCTTGGTCATGA
CTGCTGACAAGGTGCCAGAAAGATTGTAATGATGAGGATATGAGATCTTGTAACAACAGG
TTTACCTGGGTCACCGGAGCAGTCTGCTCCTTTTTGTTGGTGGTCCAATCGATTCTTGAG
GCCAATTTTGTGCTTCGTAGAAAAAATGTAGCCCGGCTTTGTAGCTCTGATCTTCCATAG
AGTGATTCACCTGTGGACTAGTGGCGGCCCTTTGTTCGCAGCTCATCGGTTGAAGCCTGG
GGCTCAATGATTTAGTTGGAGGCAACATTTAGATCACGGCTTAGTTCCCTCTTATTTACA
TCATGTTCATAGTTGATACAGGCATCAGCTCCAAATGAGAAAAGGCCATTGTTGTGAAAT
GTTGTGGAAAACTCGGCTGTCTGCTGCTGCAATAGGAAGCCGTTGAGCTACTTATCTGGC
TGCTGATATATAGGCATCTCTCGTAACTGTTGTGCAAAACTTTGCTTAATTGTTCTTACA
TAGTCAATCAGAACAGATTTTTGACCCTTAATCTTTCTTACAATATGTTTACATTTGCAA
AAAAAAAAATCAATATTTTCGTACAGGCAGTTTTGAATATAAATGTTTTGATGTAAATTT
CATGTTTTAGTTTTATATATAGTTTGAATAATTGCTGATCAAAATTTGCAAAATTATTTT
TTCCCTGTAGAAAATATGATTACCATTCCGAGATGACAGATAACTTGACCAGGCCTCTTG
CAGCCCGCGGGTCGGCACTGTTGCTTGGATTCCAGTTACCGTGACCTGGTCAATGACATG
CAGGCCACGGGGCGAGGGACCTCCGTGTCAGTGACACAAGACATGGCGTGCACTTACGGG
GTTACCGCTGAGGCAGGGTTAGTGACCATATTGTCGTTGGCCAGAGTAGGGTGTGCGTCC
GCCGGCGTCCATTCGTCCGATGGGCTGAGGCACAGCCGGAAAGTGACGTACATATGTACA
TGCACTGCTCCACGAAAAGTCATTTGCTGAGATAAGCTCAAGCGAAACAGGCTCGTTGCA
AAAGTCCACACTCGTATCTCCATCCTTCGCCGTGAGCACGAGTCAAGGAGACGAC