Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU91398
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:14425314:14430902:-1 gene:SORBI_3001G172300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTTCTCTTCTTCTCCCTCCGCAGTTCACTTGCTCCCTGCGGCCTTATCATCGAATC
AGGGGTCAATTGGTACATTACAAGACAAACATTTTGGGGAAGGACGTGACTAAGTCTACA
GTGAAGTTCCTTAACCTCACTGCTAATTTTGCATCAAGGACTTCCCAAGATGCTGTGGAT
GGTTTAAGCGATGAAAGTGATGGCGAAAGCTCAACTAATAAGAAGAGAGCCCCAAGACGT
GGAAGGAAGAAAGCCACCACTGAAATATCGGGAGGCGAAGGAGAAGGAAACCAAATCATC
ACTGAAGAAACGGCTGCTGGAGAGACCAAGGAAGTTAAGAGGAGAGGCCGCAAGAAAGCT
GCTGTTGCTGCAAGCTCAGAGGAGGAGAAGGATAAGGCCAAGGAACCGAAGAAAAGGGGA
AGGAGAAAAGTTAAGACTGTAGAGGAATCTAGTGATGATGATGGAGAGCATCGGAGCAAA
GATTTGATGCTCTATAATGAAGGAGAAGATCAGACTCAGCTACTGAATTCTGCCAATGTT
CTGGAAAGTAAAATAGAGTTAGTGCTACACGAGGATATTGGAGAAGTAGACGATTTAATT
CCGCTAGTCTGCTGCTTTGGACCTGCGAAATACTCCTTTATTCCTTCTGGAAGACCAGCC
AATAGGTTGATAGATCATGAGATTCATGATAGAATGAAGGACATGTTTTGGTCTCCAGAT
AAATTTGTGAGGGCGCCAGGAGGGTCTTCACCCAATGTTGCTCTAGCTTTAGCCGCGATT
GGTGGAAGGGTTGCATTCATGGGAAAATTAGGTGATGATGATTACGGTCAAAGTTTGCTG
TATCACTTAAACATCAATGGAGTTCAAACTCGAGCAGTTTGCATGGACCCTTCAGCGCCG
ACTGCTGTGTCCTTGATGAAGGTCAGAACCGAAGGAAGTCTGAAGACAAACTGTGTTAAA
CCTTGCGCTGAGGATTGTTTCCTGCAGTCTGATATCAACCCGGCAGTTCTAAAAGAGGCT
AAGATGTTTTACTATAATTCTTCTGCTTTGCTTGAGCCCACTACAGAGTCATCATTGTTG
AAAGCTATTGATGTTTCGAAGAAATTTGGTGGTACAATATTCTTTGATCTTAATCTTCCA
CTTCCACTATGGTCATCCAGTAAGGAAACCAAGTTGCTCATTAAGGAGGCATGGGAAGCT
GCCGATATTATTGAAGTCACAAAACAAGAACTTGAGTTCCTCTGCGGCATTAAACCATCT
GAGAAATTTGACACAAATGATAATGATAAGTCCAAATTCACACACTATAGTCCAGAAGTT
ATTATGAAATTGTGGCACAATAATCTCAAGGTCCTCTTTGTGACAAATGGTACCTCCAAG
ATTCACTATTACACAGAAAAGCACAATGGTTGGGTCCGTGGTACAGAAGATGCACCGATC
ACTCCTTTCACCAGTGATATGTCACAATCTGGTGATGCCATTGTTGCAGCCCTCATGAGG
ATGCTGATAATTAACCCTCACCTGGTCACGGACAAGGTTTACTTGCACAAGGCAGTCAAA
CATGCTATTAAATGTGGTGTCATCGATCAGTGGATGCTTGCACGAGAGCGGGGCTTCCTT
CCCAAAGAAAGAGCAGATCCAACCAGTGAGCAGTATGAAGTGAGGTCCATCACAGAGAAG
GAATACCGCACACTTCCTGATGCCATGCAGTCAGAAAACTCGTCAACCAGTGAACTTGCA
TACGTGGAGTGA

Peptide Sequence

PEP ID

OQU91398
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:14425314:14430902:-1 gene:SORBI_3001G172300 transcript:OQU91398 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASLLLPPQFTCSLRPYHRIRGQLVHYKTNILGKDVTKSTVKFLNLTANFASRTSQDAVD
GLSDESDGESSTNKKRAPRRGRKKATTEISGGEGEGNQIITEETAAGETKEVKRRGRKKA
AVAASSEEEKDKAKEPKKRGRRKVKTVEESSDDDGEHRSKDLMLYNEGEDQTQLLNSANV
LESKIELVLHEDIGEVDDLIPLVCCFGPAKYSFIPSGRPANRLIDHEIHDRMKDMFWSPD
KFVRAPGGSSPNVALALAAIGGRVAFMGKLGDDDYGQSLLYHLNINGVQTRAVCMDPSAP
TAVSLMKVRTEGSLKTNCVKPCAEDCFLQSDINPAVLKEAKMFYYNSSALLEPTTESSLL
KAIDVSKKFGGTIFFDLNLPLPLWSSSKETKLLIKEAWEAADIIEVTKQELEFLCGIKPS
EKFDTNDNDKSKFTHYSPEVIMKLWHNNLKVLFVTNGTSKIHYYTEKHNGWVRGTEDAPI
TPFTSDMSQSGDAIVAALMRMLIINPHLVTDKVYLHKAVKHAIKCGVIDQWMLARERGFL
PKERADPTSEQYEVRSITEKEYRTLPDAMQSENSSTSELAYVE

Transcript Sequence

Transcript ID

OQU91398
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:14425314:14430902:-1 gene:SORBI_3001G172300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CAGCCAAAGGGGTTTTGCTGTTCCTCGTTGCTGAGCAGTGACCCAGGAGGACTGGAGGAG
GGGCTACTGGGATTTTTGCTACTCCCCTCCATTGATGGCTTCTCTTCTTCTCCCTCCGCA
GTTCACTTGCTCCCTGCGGCCTTATCATCGAATCAGGGGTCAATTGGTACATTACAAGAC
AAACATTTTGGGGAAGGACGTGACTAAGTCTACAGTGAAGTTCCTTAACCTCACTGCTAA
TTTTGCATCAAGGACTTCCCAAGATGCTGTGGATGGTTTAAGCGATGAAAGTGATGGCGA
AAGCTCAACTAATAAGAAGAGAGCCCCAAGACGTGGAAGGAAGAAAGCCACCACTGAAAT
ATCGGGAGGCGAAGGAGAAGGAAACCAAATCATCACTGAAGAAACGGCTGCTGGAGAGAC
CAAGGAAGTTAAGAGGAGAGGCCGCAAGAAAGCTGCTGTTGCTGCAAGCTCAGAGGAGGA
GAAGGATAAGGCCAAGGAACCGAAGAAAAGGGGAAGGAGAAAAGTTAAGACTGTAGAGGA
ATCTAGTGATGATGATGGAGAGCATCGGAGCAAAGATTTGATGCTCTATAATGAAGGAGA
AGATCAGACTCAGCTACTGAATTCTGCCAATGTTCTGGAAAGTAAAATAGAGTTAGTGCT
ACACGAGGATATTGGAGAAGTAGACGATTTAATTCCGCTAGTCTGCTGCTTTGGACCTGC
GAAATACTCCTTTATTCCTTCTGGAAGACCAGCCAATAGGTTGATAGATCATGAGATTCA
TGATAGAATGAAGGACATGTTTTGGTCTCCAGATAAATTTGTGAGGGCGCCAGGAGGGTC
TTCACCCAATGTTGCTCTAGCTTTAGCCGCGATTGGTGGAAGGGTTGCATTCATGGGAAA
ATTAGGTGATGATGATTACGGTCAAAGTTTGCTGTATCACTTAAACATCAATGGAGTTCA
AACTCGAGCAGTTTGCATGGACCCTTCAGCGCCGACTGCTGTGTCCTTGATGAAGGTCAG
AACCGAAGGAAGTCTGAAGACAAACTGTGTTAAACCTTGCGCTGAGGATTGTTTCCTGCA
GTCTGATATCAACCCGGCAGTTCTAAAAGAGGCTAAGATGTTTTACTATAATTCTTCTGC
TTTGCTTGAGCCCACTACAGAGTCATCATTGTTGAAAGCTATTGATGTTTCGAAGAAATT
TGGTGGTACAATATTCTTTGATCTTAATCTTCCACTTCCACTATGGTCATCCAGTAAGGA
AACCAAGTTGCTCATTAAGGAGGCATGGGAAGCTGCCGATATTATTGAAGTCACAAAACA
AGAACTTGAGTTCCTCTGCGGCATTAAACCATCTGAGAAATTTGACACAAATGATAATGA
TAAGTCCAAATTCACACACTATAGTCCAGAAGTTATTATGAAATTGTGGCACAATAATCT
CAAGGTCCTCTTTGTGACAAATGGTACCTCCAAGATTCACTATTACACAGAAAAGCACAA
TGGTTGGGTCCGTGGTACAGAAGATGCACCGATCACTCCTTTCACCAGTGATATGTCACA
ATCTGGTGATGCCATTGTTGCAGCCCTCATGAGGATGCTGATAATTAACCCTCACCTGGT
CACGGACAAGGTTTACTTGCACAAGGCAGTCAAACATGCTATTAAATGTGGTGTCATCGA
TCAGTGGATGCTTGCACGAGAGCGGGGCTTCCTTCCCAAAGAAAGAGCAGATCCAACCAG
TGAGCAGTATGAAGTGAGGTCCATCACAGAGAAGGAATACCGCACACTTCCTGATGCCAT
GCAGTCAGAAAACTCGTCAACCAGTGAACTTGCATACGTGGAGTGAAAGGATGGGCCATC
AGTGTCTAGATACTGGATTCCTCTATTTATTTATGGAAACTGGCTTGTCGCTGCAGTTGG
CTGAAGTTGGTATTCAGAAGAATTAGCTTAAATATGCAGATTTTAGGTTGGTCGAGTATA
GGTTGATAACCCCTAATGTAAGACTAACATATTGATAGCATCAAATTTTTTACCGAGACA
ATGCAAATGTGACTGATGCCAGGAAATTTGCCTAGAATGCAACCTTTGTTCATTCTTGAT
TTCTCTGCGACCCATGTTCTCTTAGATCGCCACCTTATGCCAGTGGCACCACTGCTAATT
GTGGAATGGAGCTCCTTCGATCCTATCAGTTATGCACCAAATGTTATTTATCATATATCC
AGTGTATCAAAAATACATTATGTGACTGACCTGACCAGTCTGTTTCCTTTTCAGGTAAAA
GAGATTTTTTATTAACACTGAATGACATATTTGTTGTGGTCCAAATTGAGTCTGCTGTTG
GCTGTTCTATGCCTATTACAACAAGGCACAGACACCAAGGATAGATTTTAAAAAAACTCG
ACCTACCAAGGATAGATTCTGTTGTTTCTTCGTGCATCACTGAATAGTGGACATGGATCA
TTGGGACAGAAAAAGAGGAACAGAGAACAATGTTCATTGCAAGAAAAAAAAAGGAACAAT
GAATATGGAGGAATTGTTTTACTTTAAGCAAAGTAAGTTTCTGGTAGCTGGACCTATATT
TGGTAGTATGCATTACATGTTCTGGTTTCTACTATTAATAAAGCACCTCATATATACATT
AATGTTGGACCCAGGGTGTGTTAGTTGTGACCTAGTGGAGCCCTGATACTCTCTTCGTAT
TATTAGTCTGAAAAGTACTTTTGTCCCTTCAAAAACTCTCTCCAGAAAAATTCATGGAGT
AATGCTCTTCTGGGTTTGATACCATGTCCGTGTCTTTCCCCAGTCATTTCCTCTAAAATC
TCAAGCTATGAAGGACTAAAGGAGAAAGCATTGGCATAAGTACATCCTGTAACTAGCCAT
CTATGTTCTGGGTGGTGCTGATGACATCCTAGTGCCAACCATTTGTGGGTGATAAGATTA
AGATAGTATCAGGTACCAAATTTTAGTAGGTCATGTCCTTTATTCAGTACTCATGGACAG
ACCTCTAAATTCCTTCCCAGCTAGTTAAAATATGTTGACTCCCAGTGAAGTGTCTTCTAA
CAGTTGTGACTACCTTTAATCTGAAGGGTTCTAACTTCTAAGAGTGGGAAATCGATACTC
AGCTTGTCATTATTACTTGCATCAGCAAAGCAGTGGTATACATGGAGTAATAAAGGCATT
TACTCTGTGTTGAGTCGACATGCTTAATGAGCCAGTAATAAAGTGACATGCTGATATGGC
ATGCAATTCAACCAACCACTACCATATACTCCTGTATACTTGTCAACTAGTATACTATCC
TTTGGAAA