Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU91329
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:13446795:13450277:-1 gene:SORBI_3001G163300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAATTTGCTCAACATAAAAAAATATCAAGCACGGGCCCTCCTCATCCACCACCGGTGG
AGGATCGATGGCATCTATGATTCCTTAGACAAGGGGCGAGAATGCATGCTCAGAAATGCA
GGAATCGTGCTACAGGAGAATAATAGCATGGTGGCAGCTGGCTCAACGACACCATGGAGA
ACCGTGACCTGCAAAGTGTGCTTCGAGGAATTCTCCATGGCTGCTGTTTCGACCATGGAC
TGTGGGCATTGCTTCTGCAATGACTGTTGGACAGGGCATTTCCACGCTGCAGTAGAGAGT
GGAAAAAAACAAATTCGGTGCATGGAGGTCAAGTGCTCGGCTTTCTGTGATGAGAACCTC
GTGCTGTTTCTCCTTGGCCAAAAGTATCCAGACATGGCCAAGCGTTTCAATCGCTTCCTG
CTTGAGTCCTACATTGAGGACAACGCCTCTGTGAAGTGGTGCCCCAGCACCCCAAACTGT
GGCCATGCCATCCGCGTGGGCACCGGCGAGCGCTACTGCGAGGTGGAATGCCCCTGCGGC
CTAAGCTTCTGCTTTAACTGTATGGCGCATGCGCATTCGCCTTGCCCGTGCCCCATATGG
GAGAAATGGAATGCCAAGCGCTCCGAGGGAGAGAACATCAAGTGGATCCTCGCTAACACC
AAGAGCTGCCCCAAATGCTTCAAGGCCATCGAGAAGAATGGTGGATGCAACCTTGTCCGC
TGCAAGTGCGGCCAGTGTATGTGTTGGCTCTGCGGCGGAGGTACTGGCATGGATCACACG
TGGACCAGCATTGCCGGTCACAGCTGCAACCGGTACAAGGAGGAGTCCCGTGGAAAGACG
GCGGACACGAGCAGGGAGCAGATGGAGCGGTACAAGCACTACCACGACCGGTTCAAGATC
CACGGCGACTCGTACAGCGTGGAGAAGCAGAAGCTGGGGGCGACCATCGCGGAGCAGGTG
CGGCTCCTGGAGTCGGACAAGGACCGCCCGCTCGCCATCCGGGACGGCGACTGGCTGACC
CGGGCGCACCGCCGTCTGCTGGTGTCGCGGCAGGTGCTGTCGCGGTCGTACGTGTTCGCC
TACTACATGTTCGGCGGCGGGTGCCAGCTGCGGACGCTCCCAGTCCCGGCGGCGAGGCGC
GCGGGCGCGAGCCTCCTGGGCGTGGCGCGGAACCTGTTCGAGGACCAGCAGGAGCAGCTG
GAGCAGCACGTGGAGCACCTGTCGAGGTCGCTGGCGGAGGCGGCCGTGGTGGCGGGGACC
CCCGAGGCGGAGATCGTGCGGCAGAAGCAGGCGGCCGTCACGCTCGCCAAGACCGTGGAG
CGGCTGTGCGGGGAGATGTACAAGTGCATCCAGGACGAGCTGCTCACGCTGCTCGTCGAG
CCCATGACCATCGCGGCCTACAGGCCGGACGGCCCCGACCGAGCCAGGGAGCTCGCGGCC
TGA

Peptide Sequence

PEP ID

OQU91329
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:13446795:13450277:-1 gene:SORBI_3001G163300 transcript:OQU91329 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MNLLNIKKYQARALLIHHRWRIDGIYDSLDKGRECMLRNAGIVLQENNSMVAAGSTTPWR
TVTCKVCFEEFSMAAVSTMDCGHCFCNDCWTGHFHAAVESGKKQIRCMEVKCSAFCDENL
VLFLLGQKYPDMAKRFNRFLLESYIEDNASVKWCPSTPNCGHAIRVGTGERYCEVECPCG
LSFCFNCMAHAHSPCPCPIWEKWNAKRSEGENIKWILANTKSCPKCFKAIEKNGGCNLVR
CKCGQCMCWLCGGGTGMDHTWTSIAGHSCNRYKEESRGKTADTSREQMERYKHYHDRFKI
HGDSYSVEKQKLGATIAEQVRLLESDKDRPLAIRDGDWLTRAHRRLLVSRQVLSRSYVFA
YYMFGGGCQLRTLPVPAARRAGASLLGVARNLFEDQQEQLEQHVEHLSRSLAEAAVVAGT
PEAEIVRQKQAAVTLAKTVERLCGEMYKCIQDELLTLLVEPMTIAAYRPDGPDRARELAA

Transcript Sequence

Transcript ID

OQU91329
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:13446795:13450277:-1 gene:SORBI_3001G163300 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TAAAGCATCGTCATCAGTTCGTTCATCATCAGTGTGCCCCCTCGCCTCGCTCCCTCGGAA
AACCCTCTCCTCTCCCCTCCCCTGCCCTGCCCGGCCGGCTGCCCTCGTCTCCCCCCACCC
CGCCGCGATCAACCGAGACAGACCTCCACCGCCATGGCGAGCGACGAGGAGGGGGAGGTG
TGCGACTACTTCTACGACGACGACGACGCCGAGGAGGACGCCGCCGCCGGCCTGGAGGAG
GACTCTTCGCCGCCGCCGCCGCCGCCGCACGGCGCGGACTACTGGGTGAGTGGTCCGACC
CAGACCCCGGGGTCGCGGGGATGATGATTGTGGGTTGGGATTTCCGCGCCGGCGAGATCT
GGGAGGACCTCACCGATCGATTCGAGAGCCGCTCTGCTTACCCCCAGCTCACCAATTCCA
CCGTCCCAAGAAAGAAAATAAAGGGGGCGTGACACTCTGTTATTCCCAACCTGTGCACTT
TGATATATGCGCTAATTGTTGGAGGCCTGGCTCAAATCGGTGCCGGATGTCTTCAAGAAC
TCACCGGATCGACTTGGGGGCTTGTTGGGTTGTTATATGGTTTGTTATTTCCGTGGGATG
TATCCGTATGGTTTTGGAATTTGAGGGCGGTGAAACAAACAAATCCCTGCCTACTTCTTA
GTTGTATAAGATAAGAATTGCTAAATTCGATCAGAGTACCTGTCTTTCACTGTAAAGTGT
AAAGTTAGTATTTTATTTTGCCTAAAGTAGTGGCCATTGCTCAACAAATTCTTAAGCATG
CCAAAGAATTACGAGATGCATGCTGCTCTTTTTTTTTTTTACTTAAAAAAACTCAAAGTT
CGATTCAGTTAAAAACTAGGGAAAAAACCGCAAGCTTTTGTTTACCCTTTTTGTAGATTC
TAGTACCACTAATATAACTAAACAAGCATTCACTGTAACTTGATAACTTCCGAACAAGGC
ATGTTATAGCAAGCAACCATTCATCTGTTGTACTGATATTAGTTCACTTCTCATCAGCTG
ATGGCCAGATGTTTGATCTATGGTGTAAACAGCTGTTTTTTCGTCTTGTTTTCTGCAATC
ATATATAGGTACCATTTGGCATTGTTTGAGGTGCTTTTCAGTGGATTGCACCCAAAACAG
AGAATTTGTTTCCCCAAGAAGATTATTTATTTGTTTTAATTAACTAGATTCATCCATGCT
GTTTTCATACTGAACTGTTTTCTAAAGAAACATGTTACATGGATAATTGTTGTTGGTTTT
GCAGGCTATCACACAAGAGACCGTTTTTGCTGCACAGGTAATGGAACAGATTTAACCATT
TCTTAAGTGTTCATGTTCATTGTTCAGAACTTCAGATTATGCCTGTCCTACCCTCATTTT
TATCAACTACAATTTTCTACTAACCGACCTACAGAAACAAGACCTGTCTACGGTGATGAA
TTTGCTCAACATAAAAAAATATCAAGCACGGGCCCTCCTCATCCACCACCGGTGGAGGAT
CGATGGCATCTATGATTCCTTAGACAAGGGGCGAGAATGCATGCTCAGAAATGCAGGAAT
CGTGCTACAGGAGAATAATAGCATGGTGGCAGCTGGCTCAACGACACCATGGAGAACCGT
GACCTGCAAAGTGTGCTTCGAGGAATTCTCCATGGCTGCTGTTTCGACCATGGACTGTGG
GCATTGCTTCTGCAATGACTGTTGGACAGGGCATTTCCACGCTGCAGTAGAGAGTGGAAA
AAAACAAATTCGGTGCATGGAGGTCAAGTGCTCGGCTTTCTGTGATGAGAACCTCGTGCT
GTTTCTCCTTGGCCAAAAGTATCCAGACATGGCCAAGCGTTTCAATCGCTTCCTGCTTGA
GTCCTACATTGAGGACAACGCCTCTGTGAAGTGGTGCCCCAGCACCCCAAACTGTGGCCA
TGCCATCCGCGTGGGCACCGGCGAGCGCTACTGCGAGGTGGAATGCCCCTGCGGCCTAAG
CTTCTGCTTTAACTGTATGGCGCATGCGCATTCGCCTTGCCCGTGCCCCATATGGGAGAA
ATGGAATGCCAAGCGCTCCGAGGGAGAGAACATCAAGTGGATCCTCGCTAACACCAAGAG
CTGCCCCAAATGCTTCAAGGCCATCGAGAAGAATGGTGGATGCAACCTTGTCCGCTGCAA
GTGCGGCCAGTGTATGTGTTGGCTCTGCGGCGGAGGTACTGGCATGGATCACACGTGGAC
CAGCATTGCCGGTCACAGCTGCAACCGGTACAAGGAGGAGTCCCGTGGAAAGACGGCGGA
CACGAGCAGGGAGCAGATGGAGCGGTACAAGCACTACCACGACCGGTTCAAGATCCACGG
CGACTCGTACAGCGTGGAGAAGCAGAAGCTGGGGGCGACCATCGCGGAGCAGGTGCGGCT
CCTGGAGTCGGACAAGGACCGCCCGCTCGCCATCCGGGACGGCGACTGGCTGACCCGGGC
GCACCGCCGTCTGCTGGTGTCGCGGCAGGTGCTGTCGCGGTCGTACGTGTTCGCCTACTA
CATGTTCGGCGGCGGGTGCCAGCTGCGGACGCTCCCAGTCCCGGCGGCGAGGCGCGCGGG
CGCGAGCCTCCTGGGCGTGGCGCGGAACCTGTTCGAGGACCAGCAGGAGCAGCTGGAGCA
GCACGTGGAGCACCTGTCGAGGTCGCTGGCGGAGGCGGCCGTGGTGGCGGGGACCCCCGA
GGCGGAGATCGTGCGGCAGAAGCAGGCGGCCGTCACGCTCGCCAAGACCGTGGAGCGGCT
GTGCGGGGAGATGTACAAGTGCATCCAGGACGAGCTGCTCACGCTGCTCGTCGAGCCCAT
GACCATCGCGGCCTACAGGCCGGACGGCCCCGACCGAGCCAGGGAGCTCGCGGCCTGATT
TTTTTTTTATTTTTACTACTTGCGGCCCAGTGTGGCAGCAGATGCATATACAGCGTGCGT
GCCGTGAAATGCTTGTTTTTTACGGTGTTAACATAGGAGGATTGAAGTGTACTGATGTTA
ATTAATTAAAAGAAGGGGGGTCTGACCATCTGTCTGGTA