Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU91211
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:11223555:11230721:1 gene:SORBI_3001G140700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCGCCTCCACCAGGACTACCAGCTCGTTCCCCTACCTAGTCGCCGCCTCCTCTCCC
GCGGCCCGCCGCCACGGGGCCAGCCACCGGATCCGCGCCTCGGTGGGGGAGGCGGCGATG
GACGTGGTGTCGGAGGCGGAGCTGCGGGAGAAAGGGTTCATGGGGATGCGGAAGACCAAG
CTCGTGTGCACGGTGGGGCCCGCATGCGTCGAGGCGCTGCCGGCGCTGGCGCGCGGCGGG
ATGGGCGTGGCGCGGGTCAACCTCTGCCACGGTGGCCGCGAGTGGCACCGCGCCGCCATG
CGCGCCGTGCGGAGGCTCAACGAGGAGGAAGGCTTCTGCGTGACGCTTATGGTTGACACC
GAGGGCTCCCAGCTCCTCGTCGCGGACCACGGAGGCGCCACCTCAGCGAAGGCCGAGGAT
GGGTCAGAGTGGATATTTACAAACAGAAGAGCTGATGAAGCCCATCAGTTCACAATGCAT
GTGAATTTTGATAAGTTTTCTGAAGGCATTTTGGTTGGTGACGAGCTTGTAATAGACGGT
GGAATGGCAACATTTGAAGTTAATGAGAAAATAGGAAATGATTTGCGCTGTAAGTGCACG
GACCCAGGTTTGCTTCTTCCTCGAGCCAAGTTGTCATTCTGGAGGAACGGAAAATTAGTT
CAAAGGAACTTTGGCCTTCCTACATTGTCAACAAAGGTGGCCGATGTTTCTGAAGCAGTG
CGGCAATACGCAGATGCTGTGATGATATCAGCAGAGTCAGCTATAGGTGCATATCCCCAG
AAAGCACTATCTGTACTTCGTGTGGCCAGTGAGAGGATGGAATCATGGAGCCGTGAGGAA
AACATGCATAAACGTCTTCCACAACATCAGCTTGCAATTGCTCTGCCTGACCGGATCTCA
GAGCAAATTTGCAACTGTGCTGTAGAAATGGCAAACAACCTTGCTGTGGATGCCATATTT
GTTTACACAAAACATGGTCACATGGCCTCACTTCTGTCACGCAACCGGCCCAACCCTCCC
ATATTTGCATTCACTGATAATGCCAATTCAAGAAAGAGCATGAACCTCTACTGGGGAGTG
ATTCCACTTCATCTACCATTGTCAAATAGCATGGAAGATAACTTTAATAAAACCATCAGC
CTGATGAAGTCAAAGGGTTCAGTGAAACCTGGAGACACGGTCTTGGTGGTATCAGACTCT
GATCTAAACCGACCTTGTGCTGCCACCTCAGTGTTCCAATCCATTCAGGTCCGGTTAGTG
GAGTAG

Peptide Sequence

PEP ID

OQU91211
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:11223555:11230721:1 gene:SORBI_3001G140700 transcript:OQU91211 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAASTRTTSSFPYLVAASSPAARRHGASHRIRASVGEAAMDVVSEAELREKGFMGMRKTK
LVCTVGPACVEALPALARGGMGVARVNLCHGGREWHRAAMRAVRRLNEEEGFCVTLMVDT
EGSQLLVADHGGATSAKAEDGSEWIFTNRRADEAHQFTMHVNFDKFSEGILVGDELVIDG
GMATFEVNEKIGNDLRCKCTDPGLLLPRAKLSFWRNGKLVQRNFGLPTLSTKVADVSEAV
RQYADAVMISAESAIGAYPQKALSVLRVASERMESWSREENMHKRLPQHQLAIALPDRIS
EQICNCAVEMANNLAVDAIFVYTKHGHMASLLSRNRPNPPIFAFTDNANSRKSMNLYWGV
IPLHLPLSNSMEDNFNKTISLMKSKGSVKPGDTVLVVSDSDLNRPCAATSVFQSIQVRLV
E

Transcript Sequence

Transcript ID

OQU91211
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:11223555:11230721:1 gene:SORBI_3001G140700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCAACAAATAAGCTAGTTTCAGTTGCTATGTCTAATTGTCTATGATGAAACTCCCAGCTG
CAGCTATATCTGCATTACTGACAGTATTTTGCTTTCATTGCAGGGCTTGCCAGCTTCTCA
ATAACAGGTTTGGGTCTTTCCTTCACATTCCCATTTGAGGTTCATGAATTTCAAGTATGT
TATCATATATATTTGGATGAGTGTAGTGGTTATCTTATCAAAGAATGACAATCACTGTTT
TCTTTCCTTGTAGTGGTTATCATATATATTTGTGAAGGAGCTTTATCCGCCTTCAGTTAC
TATGTTGATTGTCGACCTTGTGGAACCTTTCATTTGGACGGTATATTTGCTTCATCAAGA
TTGCACAAATCTTCTCACTTGTTGTACAGTTAGTTGTTGTGCTTACAAGGAAGCAACAGA
CAATGTAAAGCATCACTTAAAGAACATAAATATCATAGTCATAGCTCACAGAAGTAACAA
AAAGGAAAATATGAGACAAACAGCTACTAATGTGGAATTATGCTACTCTGGCAGCTCAGC
CAAGAAGTCATAGCCACAAGCAGCAGTTCATAAACTATGCCTCAAAGATCATATGAACAT
TTTCAATAAAATATTAAGCAGATAGACAGCACCAGATCACATGGGAGAAATCAGAATTTG
GCAGTAATACCGTCAGAAAATGGTATCAGCCAAACGAATCTTTTCAAACATTTGCTTCGT
GCATTTTGTTCCGTGCTGCAACTGAAACACCGTCAGAAAAGGGAAAATAATTCGAAGGGC
CTTTGGTTCAAGGATAAACTTTCACCCAACTGCACATGGTGCTTAACAATGCTGCTAAAT
GTACATAACAATTCATGCATGCATCAACAACTGGGGCACCTGCTGCAGTTTATATAGCTT
CTAATTCTTAAAATCATGAACAGAAACAGTTCACCTAGAGTAAAAAACATAGTGAAATTT
CCAGTCCTCGGCATCTTGGCCTCCACATCAGCACGGGACAGATTTTGCATGAATCTTGAA
GCAGCTAGGTAATTTTCCTTTTTGATAGTCCAAAGGATTTTTCTAGAATGGCGTTGCACC
AAGTCACCCGAAGCAAAACAAACATCAGATAATCGGGTATAGTACAGTAGTACTGTTACA
AAGTCACCAACCAAAGTTCATTTTTTCCCCCGGAGCCATCTGATTACATGGATTGATGAA
TAGATGTTTCAGTGCAACTCCCATGATTGTCGGCATATGTCCCCCCGTTCAGGTTACCCA
GCCAAGCAGCCCTGGTCATCAGCTTCTTCCCTGTTAAATAACTTTTCTTTTTGAGGAATA
GCTGTACATAATGACATCTTAAGCAAAATATCAGTATTCTCCCCTGGTTATCAGCTTCTT
CCCTGTAAAATAGCAACGACAATGCAAGGTGCTTCTTTCATTGTAAAACTCAGTTGCCAT
AATATGCAGTATTCTCTGAATTTTGGAATCCATTAGGCTCAGACATTTGTCATTTATGTG
CCTCCATTTATCTTCTTTCCATTTTCCCACGAGGATTGACAAGTGACTACATTCAGCATT
TTGGTACTGCATATATGTGTTTTTGAATACAAATATATCTGAGCAGAATTTACGTTTCAG
ATTTACTGCATATATGTGTTTTTGAGGCCTCTTTCGAAATACAGAACTTTCTCCCAATCC
TGAGGGGATTAATTGTTTTTTACTGACAATACACTACTGCAGAAAACCTTGCTCAATCAT
CTGTGTTCTTGTTTGTTGCAACTCTGTCCTATTCTGCTCGTATATGCTCGTTTCCTCAAT
TAGAAAAAGAAACTCGTTTCCTCGGGCTTATCGAATCTTTTTTCTCCAAACAATAATTGG
AGTTTTGAATCCCTATACCGGTCAATTTTCCACCCACGAATAAACAGAAATCTTCAAATG
CCTTTTTCTCATTTTCGAAACACGTAGTACCACCCGCAGAGCGCGGGAAAAGAAAAAAAA
AATCAAACAACGGTTAGGCCCACATTTCCCCACACGTCAGCACCCAAGCCGCCCAATCCG
CATCTGCCTGGCAGCTCGGACCCACATGTCATAGCCTGCCGGCTGCCGGCCTCTAGCTTG
GGGCAGCACAACTACTCGCACAGCCTCCCTCGCCCCTCGCATCATCCGCCGCCGGCCCAC
CACCTCCGACACCTCTCCCTCCGCCGCCTCCGATTCTTCCCCAGTCTCCGCAAACCCTAG
TCCCAATGGCCGCCTCCACCAGGACTACCAGCTCGTTCCCCTACCTAGTCGCCGCCTCCT
CTCCCGCGGCCCGCCGCCACGGGGCCAGCCACCGGATCCGCGCCTCGGTGGGGGAGGCGG
CGATGGACGTGGTGTCGGAGGCGGAGCTGCGGGAGAAAGGGTTCATGGGGATGCGGAAGA
CCAAGCTCGTGTGCACGGTGGGGCCCGCATGCGTCGAGGCGCTGCCGGCGCTGGCGCGCG
GCGGGATGGGCGTGGCGCGGGTCAACCTCTGCCACGGTGGCCGCGAGTGGCACCGCGCCG
CCATGCGCGCCGTGCGGAGGCTCAACGAGGAGGAAGGCTTCTGCGTGACGCTTATGGTTG
ACACCGAGGGCTCCCAGCTCCTCGTCGCGGACCACGGAGGCGCCACCTCAGCGAAGGCCG
AGGATGGGTCAGAGTGGATATTTACAAACAGAAGAGCTGATGAAGCCCATCAGTTCACAA
TGCATGTGAATTTTGATAAGTTTTCTGAAGGCATTTTGGTTGGTGACGAGCTTGTAATAG
ACGGTGGAATGGCAACATTTGAAGTTAATGAGAAAATAGGAAATGATTTGCGCTGTAAGT
GCACGGACCCAGGTTTGCTTCTTCCTCGAGCCAAGTTGTCATTCTGGAGGAACGGAAAAT
TAGTTCAAAGGAACTTTGGCCTTCCTACATTGTCAACAAAGGTGGCCGATGTTTCTGAAG
CAGTGCGGCAATACGCAGATGCTGTGATGATATCAGCAGAGTCAGCTATAGGTGCATATC
CCCAGAAAGCACTATCTGTACTTCGTGTGGCCAGTGAGAGGATGGAATCATGGAGCCGTG
AGGAAAACATGCATAAACGTCTTCCACAACATCAGCTTGCAATTGCTCTGCCTGACCGGA
TCTCAGAGCAAATTTGCAACTGTGCTGTAGAAATGGCAAACAACCTTGCTGTGGATGCCA
TATTTGTTTACACAAAACATGGTCACATGGCCTCACTTCTGTCACGCAACCGGCCCAACC
CTCCCATATTTGCATTCACTGATAATGCCAATTCAAGAAAGAGCATGAACCTCTACTGGG
GAGTGATTCCACTTCATCTACCATTGTCAAATAGCATGGAAGATAACTTTAATAAAACCA
TCAGCCTGATGAAGTCAAAGGGTTCAGTGAAACCTGGAGACACGGTCTTGGTGGTATCAG
ACTCTGATCTAAACCGACCTTGTGCTGCCACCTCAGTGTTCCAATCCATTCAGGTCCGGT
TAGTGGAGTAGGTTCCGTACGGGTTGCTGCAAATGTCTCATGGATTACGTGTCTCCACTC
TTCAATAAGGAGGACATTTGACTGTTATACATGTACTTGTTCGTCTGGGCTTATCAGCTG
AATCTGTCAGCCATTCAGCAGTGTTTTTCTCTCAGAATAAATCAGCCAGCAGTACTTTCT
GTCATGGCTTATCAGCCATTCCAGTATATATTGTAGCAATCGTTTTGCAATCTCACACCG
ACACAAAAGTAATGTTCTCAAGTATTATTGATCATATTTGCGATGTAGTACGTGTAAATG
TGCAATCACGCTGTGAAAATATGGAAAGTTAGGTGCTAAATATCATGGCAGCTGTATGCA
ACTCTGGACCCCACAAGTTTTTTGGAGTGAACAAATTTAACATCAGGAT