Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU91172
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:10367083:10371771:-1 gene:SORBI_3001G131900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGATTAGGGCTGGCCGCTCGGTCCTCCACCTCCTCACCCTCGCCTTCCTCCTCATC
CTCGCCGCCTCGCCCTGCCTCCAAGCTCGAGTGGACCATCGCAAACATATATCTGACTGG
AGTAGGCAACCCAACTTTGAATTGCAGAATATCTCCTCGAGTCGGAAGGATGGCCCTCAT
CTCCTGAGCAGATCAGAGGAAATAACACACAGGAAATTAAGAGGGAGAATTGGTGTAAGG
AAGAAAATGGAAGTAATGCAGCAGGATGATGAAGCATTAGTTAAACTTGAGAACGCAGGT
ATCGAACGCTCAAAAGCTGTTGATTCTGCTGTGCTGGGAAAATACAGTATCTGGAGACGC
GAAAATGAAAATGAGAAGGCAGATTCAAGGGTTCGTCTGATGCGAGATCAAATGATCATG
GCCAGAATATATTCTGTTCTTGCCAAATCGAGGGACAAGCTTGATCTCTATCAGGAGCTG
CTTGCAAGGCTCAAGGAAAGCCAGCGCTCCCTTGGGGAAGCTACTGCTGATGCCGAACTT
CCCAAGAGCGCTTCGGATAGAATAAAAGCAATGGGACAAGTTTTATCAAAAGCAAGGGAT
CTATTGTATGATTGCAAGGAAATTACCGAGCGTTTGAGAGCAATGCTTCAGTCAGCAGAT
GAGCAGGTCCGGAGCTTGAAGAAGCAGAGCACCTTTCTTAGCCAGCTGGCAGCTAAGACA
ATCCCAAATGGCATCCATTGTCTTTCCATGCGCTTAACAATTGATTATTACCTTCTGTCT
CCAGAGAAAAGAAAGTTCCCCAATAGTGAGAATTTGGAAAATCCTGATCTTTACCACTAT
GCTCTTTTCTCGGACAATGTTTTGGCAGCATCAGTTGTGGTCAACTCAACCATCATGAAT
GCAAAGGAGCCTGAAAAACATGTATTTCATCTTGTTACCGACAAACTGAACTTTGGGGCC
ATGAACATGTGGTTTTTGCTGAATCCACCTGGGGATGCAACAATCCATGTGGAAAATGTT
GATGACTTCAAATGGTTAAACTCTTCTTACTGCCCTGTTCTGAGGCAGCTTGAGTCTGCA
GCCATGAGAGAATACTATTTCAAGGCCGGTCCGAAAACACTCTCTGCTGGCTCTTCTAAT
CTGAAGTATCGAAACCCAAAATATTTGTCCATGCTCAACCATCTAAGATTTTACCTCCCC
CAAGTTTATCCCAAGCTGAATAAAATCCTTTTCCTGGATGATGACATAGTTGTCCAGAGG
GATCTAACTGGACTCTGGGAGGTTGACCTTAATGGAAATGTAAATGGAGCGGTGGAAACA
TGTGGAGAGAGTTTTCATCGATTTGACAAGTACCTCAATTTCTCAAACCCAAATATTTCT
CAGAATTTTGATCCTAATGCATGTGGTTGGGCTTATGGAATGAACATGTTTGATCTGGAA
GAATGGAAGAATAAAGACATTACTGGGATTTACCACAAATGGCAGAACATGAACGAGAAC
AGGCTGCTCTGGAAACTGGGGACATTGCCTCCAGGGCTTCTAACTTTTTACAAGCTGACA
CACCCTCTGGACAAATCATGGCATGTGCTTGGCTTAGGGTACAATCCAACCATTGAGCGC
TCAGAGATAGACAATGCTGCGGTCATCCACTACAATGGTAACATGAAGCCGTGGCTGGAA
ATCGCAATGACAAAGTATCGGCCTTACTGGACAAAGTACATCAATTATGAGCACCCGTAC
ATTCATGGATGCAAGATCAGCCAATAG

Peptide Sequence

PEP ID

OQU91172
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:10367083:10371771:-1 gene:SORBI_3001G131900 transcript:OQU91172 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAIRAGRSVLHLLTLAFLLILAASPCLQARVDHRKHISDWSRQPNFELQNISSSRKDGPH
LLSRSEEITHRKLRGRIGVRKKMEVMQQDDEALVKLENAGIERSKAVDSAVLGKYSIWRR
ENENEKADSRVRLMRDQMIMARIYSVLAKSRDKLDLYQELLARLKESQRSLGEATADAEL
PKSASDRIKAMGQVLSKARDLLYDCKEITERLRAMLQSADEQVRSLKKQSTFLSQLAAKT
IPNGIHCLSMRLTIDYYLLSPEKRKFPNSENLENPDLYHYALFSDNVLAASVVVNSTIMN
AKEPEKHVFHLVTDKLNFGAMNMWFLLNPPGDATIHVENVDDFKWLNSSYCPVLRQLESA
AMREYYFKAGPKTLSAGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQR
DLTGLWEVDLNGNVNGAVETCGESFHRFDKYLNFSNPNISQNFDPNACGWAYGMNMFDLE
EWKNKDITGIYHKWQNMNENRLLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPTIER
SEIDNAAVIHYNGNMKPWLEIAMTKYRPYWTKYINYEHPYIHGCKISQ

Transcript Sequence

Transcript ID

OQU91172
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:10367083:10371771:-1 gene:SORBI_3001G131900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CAGTGCCGAGTGTACTGGCCGCCACCACTCGCCCTCCCCCCGAAAGCCGGCACGAGCCCT
CCCTCCCTTCCCTTCCTCCAACCCGTTCCGAATTCCGATCCGCCCCGAGCCGGCCGGCCA
TGGCGATTAGGGCTGGCCGCTCGGTCCTCCACCTCCTCACCCTCGCCTTCCTCCTCATCC
TCGCCGCCTCGCCCTGCCTCCAAGCTCGAGTGGACCATCGCAAACATATATCTGACTGGA
GTAGGCAACCCAACTTTGAATTGCAGAATATCTCCTCGAGTCGGAAGGATGGCCCTCATC
TCCTGAGCAGATCAGAGGAAATAACACACAGGAAATTAAGAGGGAGAATTGGTGTAAGGA
AGAAAATGGAAGTAATGCAGCAGGATGATGAAGCATTAGTTAAACTTGAGAACGCAGGTA
TCGAACGCTCAAAAGCTGTTGATTCTGCTGTGCTGGGAAAATACAGTATCTGGAGACGCG
AAAATGAAAATGAGAAGGCAGATTCAAGGGTTCGTCTGATGCGAGATCAAATGATCATGG
CCAGAATATATTCTGTTCTTGCCAAATCGAGGGACAAGCTTGATCTCTATCAGGAGCTGC
TTGCAAGGCTCAAGGAAAGCCAGCGCTCCCTTGGGGAAGCTACTGCTGATGCCGAACTTC
CCAAGAGCGCTTCGGATAGAATAAAAGCAATGGGACAAGTTTTATCAAAAGCAAGGGATC
TATTGTATGATTGCAAGGAAATTACCGAGCGTTTGAGAGCAATGCTTCAGTCAGCAGATG
AGCAGGTCCGGAGCTTGAAGAAGCAGAGCACCTTTCTTAGCCAGCTGGCAGCTAAGACAA
TCCCAAATGGCATCCATTGTCTTTCCATGCGCTTAACAATTGATTATTACCTTCTGTCTC
CAGAGAAAAGAAAGTTCCCCAATAGTGAGAATTTGGAAAATCCTGATCTTTACCACTATG
CTCTTTTCTCGGACAATGTTTTGGCAGCATCAGTTGTGGTCAACTCAACCATCATGAATG
CAAAGGAGCCTGAAAAACATGTATTTCATCTTGTTACCGACAAACTGAACTTTGGGGCCA
TGAACATGTGGTTTTTGCTGAATCCACCTGGGGATGCAACAATCCATGTGGAAAATGTTG
ATGACTTCAAATGGTTAAACTCTTCTTACTGCCCTGTTCTGAGGCAGCTTGAGTCTGCAG
CCATGAGAGAATACTATTTCAAGGCCGGTCCGAAAACACTCTCTGCTGGCTCTTCTAATC
TGAAGTATCGAAACCCAAAATATTTGTCCATGCTCAACCATCTAAGATTTTACCTCCCCC
AAGTTTATCCCAAGCTGAATAAAATCCTTTTCCTGGATGATGACATAGTTGTCCAGAGGG
ATCTAACTGGACTCTGGGAGGTTGACCTTAATGGAAATGTAAATGGAGCGGTGGAAACAT
GTGGAGAGAGTTTTCATCGATTTGACAAGTACCTCAATTTCTCAAACCCAAATATTTCTC
AGAATTTTGATCCTAATGCATGTGGTTGGGCTTATGGAATGAACATGTTTGATCTGGAAG
AATGGAAGAATAAAGACATTACTGGGATTTACCACAAATGGCAGAACATGAACGAGAACA
GGCTGCTCTGGAAACTGGGGACATTGCCTCCAGGGCTTCTAACTTTTTACAAGCTGACAC
ACCCTCTGGACAAATCATGGCATGTGCTTGGCTTAGGGTACAATCCAACCATTGAGCGCT
CAGAGATAGACAATGCTGCGGTCATCCACTACAATGGTAACATGAAGCCGTGGCTGGAAA
TCGCAATGACAAAGTATCGGCCTTACTGGACAAAGTACATCAATTATGAGCACCCGTACA
TTCATGGATGCAAGATCAGCCAATAGAAACCAGCTAAAGTATTCTTCTGTGATGAACATT
GAAGTTAGACGGGACTCAAAAGGAAGTCCTCTGTTAGTAGTAACTATCACATGTTCTTTA
TTCGTGCTATATTAGATTTGTTAGCTATCATGTGTATGTAGTTTCATCACCCATTTGTGG
TGCTTTCTCCCCTAGCCCGTTGTTGGTTCTTGTCTCCTTTTGTCATGAAAAGAACGATGA
GCTCTATGATTCTCGTCAGCTGATAAATGTAATGAATTTCTGTTGGTGACAAATTAATGA
TGTCATTCAATTCATGGCAGCATTTAATGGCCAGTTGAGAGTTACG