Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU91007
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:7170916:7173378:1 gene:SORBI_3001G093200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGATCCCTTCCACGGCGGCATTGTGAAGGAGGAGGAGTTCGACTTCGACTTCGACTTC
ACCGGCGTTTCTGCGGGGGACGCGGCGGTGGCGGCGGCGGCGTCCTCGTGGGCCGTCGCC
TTGCCGGAGCTGCCCCGGCCGATGGAAGGACTCGGCGAGGTGGGCCCCACCCCATTCCTG
ACCAAGACCTACGACGTCGTGGACGACCCCAATACCGACACCGTCGTCTCCTGGGGGTTC
GCCGGCAACAGCTTCGTGGTCTGGGACGCTAACGCCTTCGCCACGGTGATCCTCCCGCGC
TACTTCAAGCATAGCAACTTCTCCAGCTTCGTCCGCCAGCTCAACACCTACGGGTTCAGG
AAGGTTGACCCGGACAGGTGGGAGTTCGCGAACGAGGGGTTCCAGCGTGGCCAGAAGGAG
CTCCTGAGAACGATCAAGCGCCGGCGCCCGCCGTCGAGCCCGTCGGCGCAGCAGGGGCAG
GCGCCATCGTCGTGTCTGGAGATGGGACGATTCGGGCTCGACGGCGAGGTGCACCGGCTG
CAGCGCGACAAGCGCATCCTGCTCGCGGAGGTGGTGAAGCTGCGGCAGGAGCAGCAGGCG
ACGCGCGCGCAGATGCAGGCCATGGAGGAGCGCATCACCACGGCGGAGCAGAAGCAGCTG
CAGATGACGGTGTTCCTGGCGCGCGCCTTGAAGAACCCGAGCTTCATCCGGATGCTGGTC
GACCGGCAGGGCCTTGGTGGCCGCCGTAGGGAGCTCGAGGACGCGCTCTCCAAGAAGCGC
CGCCGCCCCATCGAGTACCACCTCCCGCCCGACGGCGAGAGCAGCGGCACCGCTACGGAG
GCGGCGGTGAACGACTACATTTGCGGCCTTCCGGTCGGCGTTAATGGCGTGGCGGAGGCG
GACGACGACGGGAGCCGGCTGGAGGGGAGCGGCGGCGGCGGGGACACGGAGAGCTTCTGG
GTGGAGTTGCTCAGCCTCGGCCTGGAGGAGAAGCACCTGGAGGGCGGCGGCGGCAGCGAG
GAGGGGAGCGGAGCTGACGTGGACGACGACGTGGATGTGCTGGTGCAGAGCATCTACCAC
TTGAACCCGAACCCGGGCAGCCCCAGTGGGAAGTGA

Peptide Sequence

PEP ID

OQU91007
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:7170916:7173378:1 gene:SORBI_3001G093200 transcript:OQU91007 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDPFHGGIVKEEEFDFDFDFTGVSAGDAAVAAAASSWAVALPELPRPMEGLGEVGPTPFL
TKTYDVVDDPNTDTVVSWGFAGNSFVVWDANAFATVILPRYFKHSNFSSFVRQLNTYGFR
KVDPDRWEFANEGFQRGQKELLRTIKRRRPPSSPSAQQGQAPSSCLEMGRFGLDGEVHRL
QRDKRILLAEVVKLRQEQQATRAQMQAMEERITTAEQKQLQMTVFLARALKNPSFIRMLV
DRQGLGGRRRELEDALSKKRRRPIEYHLPPDGESSGTATEAAVNDYICGLPVGVNGVAEA
DDDGSRLEGSGGGGDTESFWVELLSLGLEEKHLEGGGGSEEGSGADVDDDVDVLVQSIYH
LNPNPGSPSGK

Transcript Sequence

Transcript ID

OQU91007
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:7170916:7173378:1 gene:SORBI_3001G093200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GAACTCTCGCCCGCGCCTTCGCGAAACTTCGTCGCCACATCACCTCACCCGCTCCAGATT
AAACAACGCCTCCCCGCCCCACTCCCCAGCGAAGGCCTCGCGGCCACCTCTTCCAGAACC
GTCTGGAATGTTCGGCGCCGACGCCGGGCGCCCGCCATACGTGGGGCCTCGCGCCTGCCC
GTGGCGGTCCGCGTGTGCTTGCCTACTGGTAGAACGTCCCCCGACGAGGCGACGACGCCG
TATATACCCGCCTCAAGTACAAAGGGAAAGCTACTCGCCGGGCACCTCAACTGGGGAGAC
TGTACTTTCCGGTCTCTGGTCCTTCACGCTCTGTACGTTCATGCACTGTTGCTCTCACTC
GCTTTCTTCTTCTACCTCTGGCTCTGGTCCTTCCTCCCCCTTCTCTGCCAAAGCTCTGCG
TCTTGCCGCTGCGGTTTTCACTAATTTCTTTCCCTTTCGATTCGCAGAGGCTTCAGTTTA
GACGTTCTCTAATCGGGTAAGCTAACGTCGATAGCTAAGATTTTGCGAGCATTTGCAGTC
TACTGACAACTTCTTCTTCCACCTCTTTTTTTCGTTTTCGACCAACCTTTGGTGCTTCTT
GAATTCTCGTGCTCTTTCGACATTCAGGAAGGCCATTTTCAGATCGAGCTAGTTCAGCCG
AGGCGTTTTTTTCAGCCAAAGATCGCCATCTTTTGGACCTGCTCTTGATTCGTTCGTTTG
GATTGTTTGATTCGTTTCGACTTTCCTTTGCTCCTCTGCTCCGTCAAGCGGACCTCCTCT
GTTTTTCGGCCATTGCTCGGTCGCGTTTGTTTGTTTGTTTGTTTGCTTGTTCGGTTTGTT
GGTGCGGCCATGGATCCCTTCCACGGCGGCATTGTGAAGGAGGAGGAGTTCGACTTCGAC
TTCGACTTCACCGGCGTTTCTGCGGGGGACGCGGCGGTGGCGGCGGCGGCGTCCTCGTGG
GCCGTCGCCTTGCCGGAGCTGCCCCGGCCGATGGAAGGACTCGGCGAGGTGGGCCCCACC
CCATTCCTGACCAAGACCTACGACGTCGTGGACGACCCCAATACCGACACCGTCGTCTCC
TGGGGGTTCGCCGGCAACAGCTTCGTGGTCTGGGACGCTAACGCCTTCGCCACGGTGATC
CTCCCGCGCTACTTCAAGCATAGCAACTTCTCCAGCTTCGTCCGCCAGCTCAACACCTAC
GGGTTCAGGAAGGTTGACCCGGACAGGTGGGAGTTCGCGAACGAGGGGTTCCAGCGTGGC
CAGAAGGAGCTCCTGAGAACGATCAAGCGCCGGCGCCCGCCGTCGAGCCCGTCGGCGCAG
CAGGGGCAGGCGCCATCGTCGTGTCTGGAGATGGGACGATTCGGGCTCGACGGCGAGGTG
CACCGGCTGCAGCGCGACAAGCGCATCCTGCTCGCGGAGGTGGTGAAGCTGCGGCAGGAG
CAGCAGGCGACGCGCGCGCAGATGCAGGCCATGGAGGAGCGCATCACCACGGCGGAGCAG
AAGCAGCTGCAGATGACGGTGTTCCTGGCGCGCGCCTTGAAGAACCCGAGCTTCATCCGG
ATGCTGGTCGACCGGCAGGGCCTTGGTGGCCGCCGTAGGGAGCTCGAGGACGCGCTCTCC
AAGAAGCGCCGCCGCCCCATCGAGTACCACCTCCCGCCCGACGGCGAGAGCAGCGGCACC
GCTACGGAGGCGGCGGTGAACGACTACATTTGCGGCCTTCCGGTCGGCGTTAATGGCGTG
GCGGAGGCGGACGACGACGGGAGCCGGCTGGAGGGGAGCGGCGGCGGCGGGGACACGGAG
AGCTTCTGGGTGGAGTTGCTCAGCCTCGGCCTGGAGGAGAAGCACCTGGAGGGCGGCGGC
GGCAGCGAGGAGGGGAGCGGAGCTGACGTGGACGACGACGTGGATGTGCTGGTGCAGAGC
ATCTACCACTTGAACCCGAACCCGGGCAGCCCCAGTGGGAAGTGAAAGTTCCAGAACGTT
CCATATTCCAGAACCCACTATGGTCTATGGAAGCTCCCAGTGGGCACTGCAAGTAGGCGA
TAGTTTTTTATCCGGCGCCTGACTTTTTGTCGCGGGCTGTGTGCAAGTTGCAAAAGTTGC
GGTTGGCCGGTTGCCAAGGAATGTTCAGGAAGCTCGTCGGACTACGAAGTTTCTAGAAGA
TGGAGCAGCAAGGCTCCAGCCTACTGTACTATCAGTGGCAAGTTAGATTCTGACTAGATC
AGGATGAAGCAAAGGCACTTTCCAAATGTGGCTGATGGTGCCATTATTCTGACTAGATCA
GGAAGAAGCAAGGTACAAAAACCAAAAACTTTTTTAAGATTTCTCGGCACATGTATGGAG
CATTAAATATAAATGAAAATAAAAACTAATTGTACAAT