Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90982
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:6849743:6856999:1 gene:SORBI_3001G088100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGGCGGTCGAGAGGGGTGCCGAATTCCGGTGACGATGACACCGGACACAGGTCGAAG
CGGAGGAGGGTCTCGGGGTCGGGCGGGGACGCGACGGACTCCATTTCAGCCGCCATCGGG
GGAGCTGGAGAGGGAGGGGGCAAGAAGGCGCTCTACCACTGCAACTACTGCAACAAGGAC
ATCTCCGGGAAGATACGGATCAAATGCTCCAAGTGCCCTGACTTCGACCTCTGCGTGGAG
TGCTTCTCTGTTGGCGCTGAAGTTACCCCACACCGCAGCAACCATCCATACAGAGTCATG
GACAACCTGTCTTTCCCACTTATTTGCCCAGACTGGAATGCAGATGAAGAAATTCTCCTC
CTTGAGGGAATTGAAATGTATGGTCTGGGAAACTGGCTTGAAGTGGCAGAACATGTTGGT
ACCAAGTCTAAGTTACAGTGTATTGATCATTACACAACAGCATACATGAACTCACCTTGT
TATCCCCTCCCGGATATGTCTCATGTTAATGGCAAGAACAGGAAGGAGCTTCTAGCTATG
GCTAAAGTGCAGGGTGAGAGTAAAAAAGGGACTTCACTGTTATCTGGAGAACTGACTCCT
AAGGCTGAATCTCCATTTTCTCCCTCCAGGGTCAAGGTGGAAGATGCACTTGGAGAAGGT
CCAGCAGGTCGATCACCTTCACACATAGCTGTTGGTGCAAATAAAAAGGCTTCAAATGTG
GGACAGATTAAAGATGGTGCTAATGTGTCAAAAATCGAAGATGGTCATGTCGATAGAAGC
GTTGGTGTGAAGAAGCCCAGATATTCTGCAGATGAAGGCCCTTCGTTGACTGAACTGAGT
GGATACAATGCAAAGAGACATGAGTTTGACCCAGAGTATGATAATGATGCCGAACAAGCG
CTTGCTGAGATGGAATTTAAAGAAACTGATTCGGAAACCGATCGTGAACTGAAACTCCGT
GTTCTTCGTATTTATCTGTCCAGGCTTGAAGAAAGAAAAAGGAGAAAGGAGTTCATATTG
GAAAGAAATTTATTGTTCCCTAATCCCTTGGAGAAAGATCTTACAAATGAAGACAGGGAA
GTTTACCATCGCTATAAGGTCTTCATGCGTTTTCTTTCCAAGGAGGAACATGAAGCCCTC
ATTAGGAGTGTCATTGAGGAGCGAAAAATTCGGAGGAGAATTCAAGAACTCCAGGAATGT
CGCTCTGCTGGGTGCCGCACACTGGCTGAAGCAAAGATACACATAGAACAAAAGAGGAAA
AAAGAATACGAGCTGAATGCCCAAAAAGCTAAGGAGAGCAGCCTTATTGCAAATAATAAA
TCGGTACAGAAGATGAATCGATCTATGAAAATTGAGTCTGATGGGAATTTGGATCCAAAG
AAAGGTGGTGCTGGCTTGGATTCTCCTAAAACTACAGGACTTACAAGTGTTAAGCAGTGG
GATGACTGGGATATAGTTGGTCTTCCTGGGGCAGAGCTATTAAGTGCTAGCGAAAAGCTT
CTATGTTGTCAGAACAGATTGCTACCTAGTCATTACCTTAGAATGCAGGAGGTGTTGATG
CAGGAGATATTCAAGGGTAGTGTCTTAAAGAAGGAAGATGCCCATGTCTTATTTAAGGTT
GATCCTACCAAAGTAGATAGTGTTTATGATATGGTAACGAAAAAGCTGGGCAACCATGAG
GAGGCTCCAACTGTCTAG

Peptide Sequence

PEP ID

OQU90982
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:6849743:6856999:1 gene:SORBI_3001G088100 transcript:OQU90982 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGRSRGVPNSGDDDTGHRSKRRRVSGSGGDATDSISAAIGGAGEGGGKKALYHCNYCNKD
ISGKIRIKCSKCPDFDLCVECFSVGAEVTPHRSNHPYRVMDNLSFPLICPDWNADEEILL
LEGIEMYGLGNWLEVAEHVGTKSKLQCIDHYTTAYMNSPCYPLPDMSHVNGKNRKELLAM
AKVQGESKKGTSLLSGELTPKAESPFSPSRVKVEDALGEGPAGRSPSHIAVGANKKASNV
GQIKDGANVSKIEDGHVDRSVGVKKPRYSADEGPSLTELSGYNAKRHEFDPEYDNDAEQA
LAEMEFKETDSETDRELKLRVLRIYLSRLEERKRRKEFILERNLLFPNPLEKDLTNEDRE
VYHRYKVFMRFLSKEEHEALIRSVIEERKIRRRIQELQECRSAGCRTLAEAKIHIEQKRK
KEYELNAQKAKESSLIANNKSVQKMNRSMKIESDGNLDPKKGGAGLDSPKTTGLTSVKQW
DDWDIVGLPGAELLSASEKLLCCQNRLLPSHYLRMQEVLMQEIFKGSVLKKEDAHVLFKV
DPTKVDSVYDMVTKKLGNHEEAPTV

Transcript Sequence

Transcript ID

OQU90982
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:6849743:6856999:1 gene:SORBI_3001G088100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCGAGTCCACCTCTGAGGCTTTGACCTCCTCCTCCTCTCTCTCTCGATGGTCGTCTTCTC
CACGACACCTCAACCCCAATCGGAACCCGGACCCAGATCTCCGAAAAATCCCCAATAACA
ATCTGCGGTCCGCCGTTGTGATTACACCTTCCAATCCGATCCCAAGTCTGTTCGATGCGA
ATAGCAGCGGCGATTTAGCGAACCGCGCGTTCGCTAGGGTTAGGGTTTCGAGGGTTTGCG
CTAGGGTTTGGGCGCAGGATGGGGCGGTCGAGAGGGGTGCCGAATTCCGGTGACGATGAC
ACCGGACACAGGTCGAAGCGGAGGAGGGTCTCGGGGTCGGGCGGGGACGCGACGGACTCC
ATTTCAGCCGCCATCGGGGGAGCTGGAGAGGGAGGGGGCAAGAAGGCGCTCTACCACTGC
AACTACTGCAACAAGGACATCTCCGGGAAGATACGGATCAAATGCTCCAAGTGCCCTGAC
TTCGACCTCTGCGTGGAGTGCTTCTCTGTTGGCGCTGAAGTTACCCCACACCGCAGCAAC
CATCCATACAGAGTCATGGACAACCTGTCTTTCCCACTTATTTGCCCAGACTGGAATGCA
GATGAAGAAATTCTCCTCCTTGAGGGAATTGAAATGTATGGTCTGGGAAACTGGCTTGAA
GTGGCAGAACATGTTGGTACCAAGTCTAAGTTACAGTGTATTGATCATTACACAACAGCA
TACATGAACTCACCTTGTTATCCCCTCCCGGATATGTCTCATGTTAATGGCAAGAACAGG
AAGGAGCTTCTAGCTATGGCTAAAGTGCAGGGTGAGAGTAAAAAAGGGACTTCACTGTTA
TCTGGAGAACTGACTCCTAAGGCTGAATCTCCATTTTCTCCCTCCAGGGTCAAGGTGGAA
GATGCACTTGGAGAAGGTCCAGCAGGTCGATCACCTTCACACATAGCTGTTGGTGCAAAT
AAAAAGGCTTCAAATGTGGGACAGATTAAAGATGGTGCTAATGTGTCAAAAATCGAAGAT
GGTCATGTCGATAGAAGCGTTGGTGTGAAGAAGCCCAGATATTCTGCAGATGAAGGCCCT
TCGTTGACTGAACTGAGTGGATACAATGCAAAGAGACATGAGTTTGACCCAGAGTATGAT
AATGATGCCGAACAAGCGCTTGCTGAGATGGAATTTAAAGAAACTGATTCGGAAACCGAT
CGTGAACTGAAACTCCGTGTTCTTCGTATTTATCTGTCCAGGCTTGAAGAAAGAAAAAGG
AGAAAGGAGTTCATATTGGAAAGAAATTTATTGTTCCCTAATCCCTTGGAGAAAGATCTT
ACAAATGAAGACAGGGAAGTTTACCATCGCTATAAGGTCTTCATGCGTTTTCTTTCCAAG
GAGGAACATGAAGCCCTCATTAGGAGTGTCATTGAGGAGCGAAAAATTCGGAGGAGAATT
CAAGAACTCCAGGAATGTCGCTCTGCTGGGTGCCGCACACTGGCTGAAGCAAAGATACAC
ATAGAACAAAAGAGGAAAAAAGAATACGAGCTGAATGCCCAAAAAGCTAAGGAGAGCAGC
CTTATTGCAAATAATAAATCGGTACAGAAGATGAATCGATCTATGAAAATTGAGTCTGAT
GGGAATTTGGATCCAAAGAAAGGTGGTGCTGGCTTGGATTCTCCTAAAACTACAGGACTT
ACAAGTGTTAAGCAGTGGGATGACTGGGATATAGTTGGTCTTCCTGGGGCAGAGCTATTA
AGTGCTAGCGAAAAGCTTCTATGTTGTCAGAACAGATTGCTACCTAGTCATTACCTTAGA
ATGCAGGAGGTGTTGATGCAGGAGATATTCAAGGGTAGTGTCTTAAAGAAGGAAGATGCC
CATGTCTTATTTAAGGTTGATCCTACCAAAGTAGATAGTGTTTATGATATGGTAACGAAA
AAGCTGGGCAACCATGAGGAGGCTCCAACTGTCTAGCTTATGCTTTTGAGCTTGCCTGCT
GTGACATGCCGAAGAAAACAAATCTTGGTTTCGCCCCCTTTGCAGCGCATCTGAACCATA
GCTGAAGGTGGAACTGTACTAAATCGAATTGGCCATAGTTTACAGAAATTCATATCAGTT
GTCAGAAGCACAATAAGGCATTCCAGCCAAGTTGTAAAATTATTCCCGCCCGACCAGAAT
GTGTAGCATGAGTTATTCATTTCTGTTCTGCCATTGTCGTGTACTGTTGCAGTTGTGGTA
GTGCCTTGTTGTAGTAGGTATAGGTGCCTGAGTTTATATGTATCATCGTGTATGTACCAT
TGGTCGCTCTATTTTATGCCATTGTACCAACCCCAGACATTGATTATTACAATTCATCTT
GCAGCCAAATTCTTGTCTCTAATGGAAAGCTTGGCCTTCGTCTTTGTTTTCGTCTGTAAT
GGAATGCTTAACCTCCATCTTTGTTTTCAGTTTGTTGGTTTTGGTTGAAGAGCAGAACCC
TGCTCTCGGTGTACCCCCTCCGGCTCCACACACAAAAAAAAAAACATCATGAGGTCATGA
TAGCTGGGATTCAATATCGTCATGAGGTTGGTGTACTCCTCCTTCCGTCTCGGATAAAAT
ATCATCATGAGGTGGGGTTCAAATATCGTTATGAGGTTCGAGAAGTACTATCACTTGTTC
TGACTTCAGGCCTTCACCAACGCAGGCTAAAAAAAACATTAGCCTCAGTAAGGTCTTGTT
TAGTTAGCACTTTCATTTTTATTTGGCAATTATTGTCCATTGTAAATTAATTAGGCTCAA
AAGATTCGTATCATAAGTTATAGATAAAATGTATAATTAATTATTTTTATATATATTTAA
TATTGTATATATATATATATATTCTAGGATTTGATTTGACGAAAAGTCTAAAAAAGCAGT
TATCCATGTAGGTCGGGATGGATGAAGCCATCAATTCTCACAGCGCAAGCCTATGACCTT
GTTTAGTTCCGAAAAGTGAAAAGTT