Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90965
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:6624642:6640434:-1 gene:SORBI_3001G085700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTTTCTCCCCGCGCTCGCCGTGGTCGCGTCCCAAGAGAAACGACGTCTACTCAACC
TTCGTCGTCCACGGCGATGACGACGAGGACGACGCCCGCGGCAGCAGGCGCGGCAGGGGC
CCGTCCACGCGGGCGGAGGAAGACGAGGAGGAAGACCCCTCCTCGCTGCCTCCGCTTCTC
CAGCGGCTCCCCAAGGACTTCGGCGGCCCCTCCTTTGACGAAGACGAGGACGCCTACTCC
TCCGACCCCGACGATGCTTCCCTCTCCGCTACGGTGGTCTTCAAGAGCGGCGCCCCGGCC
TCCGCTCGATCTCCGTTCCTGGATCTGCGGCGCTCCAGCCCCCGCGCTACCGATGACGAC
CCATACTCTACCTTCGTCGTCCACTCCACCGCACGCTCGGGGGGGACCTCCTCCAGCCCT
CGAGGGTCCGCCTCAGGCACATTCATCCGTCGCTCCGGGGGCTCGTCCAGCCCTCACGAA
TCCGTCTCTGGCACATTCATCCGCCGGACTAGCACCCCGTCGAGCCCCCGGGACTCGGTC
TCCGGCACATTCATCCGCCGACCAGGGAGCCCGTCGAGCCCCCGCGGGTCGTTCTCTGGC
ACCTTCATTCGCCACACCAGCGGGGGTTCCAGTTCCTATGAATCTGCTTCTGGCGGCGGC
GGGGGTTTCGGGTCCTCTTTCTGGAGTCCAGCGGTGGAGCAGACAGAGGAGCTCCGGCAA
CCGTCGCCTCTGATGCAGCAACAACAGCAGCAGCATTCAAGGCGGAAGCCATCAGTGAGC
TCGGCGCCAGACAGTGTTACCAGAGAGGATCCTTCCACCAAGTACGAGCTGCTCCATGAG
CTTGGGAAAGGCTCATATGGTGCAGTGTACAAAGCAAGGGATCTCAGAACGCAGGAGCTT
GTGGCTGTCAAGATTATCTCACTAACAGAAGGGGAAGAAGGATATGAAGACATACGGGGA
GAAATTGAGATGCTGCAGCAGTGTAGCCATCCAAATGTTGTCCGCTACTTTGGAAGCTAC
CAAGGAGAGGACTACCTATGGATAGTTATGGAGTACTGTGGTGGTGGAAGTGTTGCTGAT
TTGATAGGCATCACAGAGGAGCCTCTTGATGAATCCCAAATAGCTTATATATGTAGAGAA
GCACTAAAGGGCCTTGCTTACCTGCACTCCATTTTTAAAGTTCATAGAGATATTAAGGGT
GGCAACATTCTTCTAACTGAGCAAGGCGAGGTGAAGTTGGGTGATTTTGGTGTAGCTGCC
CAGCTGACAAGAACCATGTCAAAGCGCAACACGTTCATTGGTACTCCACATTGGATGGCA
CCAGAGGTCATTCAAGAAAGTCGTTATGATGGAAAGGTAGATGTTTGGGCATTAGGTGTA
TCTGCAATTGAGATGGCAGAGGGCATGCCACCAAGATCCACTGTACATCCAATGAGAGTT
ATCTTCATGATATCCAGTGAACCAGCACCAATGCTGGAGGATAAGGAGAAATGGTCTCTA
CTCTTCCATGATTTTATTGCAAAGTGTCTAACAAAAGATCCAAGACTTCGGCCTGCTGCA
AGTGAGATGGTGAAGCACAAATTTATTGAGAAGTGCAATAGTGGAGCTTCAAAAATGTTG
GCGAAGATCAAGGAAGCGAAGAAGATTAGAGCCACACTTGCTGTGCAAAATGAACTGTCT
GACCCTGACAATACAATGCAAGATGTGCCTGTTCGAATAAATGAAGACTATGGGGAAACT
GTTCCTACAAATTCTCAGCAACACATGAATCATGGGACATATAATGATTGTCAGGCAGGT
GATTTTGGTACTATGATAGTTCATACTGAAGATGGCGACGAAGTGGCAGAATCACCCATT
TTCCCAAGAACAGAGTTCATACCTGGCCTTGGTAGCATCAATTCTTTCACACATGATCCA
AAGAGAGCGGAACTTATTTCAAGTTTTTGGGCGGAGAACACAGGTGATAGTGATGCCAAT
AAAGATCGGGATTTAGATGATCGTCCTGACATACAGGAATCAAAAGCAATCCCACCTTTA
ACTGGAACAGTGAAGAAGCATATTGGTGCAGAAGGGACTATAAGACGCCATGATAATCAA
GTTAATTTGTCACCAGGATTTGCGAACACAACTAAATTGAACAGCAGCCCGAGCCGCAAA
GCGTTTTCGGTTCAGGATAAGCTCTGGTCAATTTATGCTGCCGGCAACACTGTACCAATA
CCATTTCTTAAGGCAATCGACATTTCACCACTAGCTCTAGTATCAGAAAATGAAGCAGGA
AATGGCCTGGCTGGGTCAAGTACAAATGATGCCTTGGAGGCAGTTAGGGAGCTGTTCAGT
GGTGATGGGCAGGCAAAGAAAGGACGGAAAGGGCAAAACGAAGTCCCTCTTCCTCCGGGT
GTGCACCACAGGCTAATGACAAGCCCCACACTGATGAACCTGGCTCAAGCGTTAGCGTAT
CATAAAACGTGCTACGAGGACATGCCTCTACAAGATTCACAAGCGACGCAAGAGCAGCAG
ACGATACAAAATCTTTGTGATACACTTCGAACCATACTGAGGTTGTAG

Peptide Sequence

PEP ID

OQU90965
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:6624642:6640434:-1 gene:SORBI_3001G085700 transcript:OQU90965 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAFSPRSPWSRPKRNDVYSTFVVHGDDDEDDARGSRRGRGPSTRAEEDEEEDPSSLPPLL
QRLPKDFGGPSFDEDEDAYSSDPDDASLSATVVFKSGAPASARSPFLDLRRSSPRATDDD
PYSTFVVHSTARSGGTSSSPRGSASGTFIRRSGGSSSPHESVSGTFIRRTSTPSSPRDSV
SGTFIRRPGSPSSPRGSFSGTFIRHTSGGSSSYESASGGGGGFGSSFWSPAVEQTEELRQ
PSPLMQQQQQQHSRRKPSVSSAPDSVTREDPSTKYELLHELGKGSYGAVYKARDLRTQEL
VAVKIISLTEGEEGYEDIRGEIEMLQQCSHPNVVRYFGSYQGEDYLWIVMEYCGGGSVAD
LIGITEEPLDESQIAYICREALKGLAYLHSIFKVHRDIKGGNILLTEQGEVKLGDFGVAA
QLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGMPPRSTVHPMRV
IFMISSEPAPMLEDKEKWSLLFHDFIAKCLTKDPRLRPAASEMVKHKFIEKCNSGASKML
AKIKEAKKIRATLAVQNELSDPDNTMQDVPVRINEDYGETVPTNSQQHMNHGTYNDCQAG
DFGTMIVHTEDGDEVAESPIFPRTEFIPGLGSINSFTHDPKRAELISSFWAENTGDSDAN
KDRDLDDRPDIQESKAIPPLTGTVKKHIGAEGTIRRHDNQVNLSPGFANTTKLNSSPSRK
AFSVQDKLWSIYAAGNTVPIPFLKAIDISPLALVSENEAGNGLAGSSTNDALEAVRELFS
GDGQAKKGRKGQNEVPLPPGVHHRLMTSPTLMNLAQALAYHKTCYEDMPLQDSQATQEQQ
TIQNLCDTLRTILRL

Transcript Sequence

Transcript ID

OQU90965
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:6624642:6640434:-1 gene:SORBI_3001G085700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTTTCCCCATTTGCCATTCCCGACGAGCACCTTCACCGTCTCCTCCCACCTCGCGTGGCA
CGCCATGGCTTTCTCCCCGCGCTCGCCGTGGTCGCGTCCCAAGAGAAACGACGTCTACTC
AACCTTCGTCGTCCACGGCGATGACGACGAGGACGACGCCCGCGGCAGCAGGCGCGGCAG
GGGCCCGTCCACGCGGGCGGAGGAAGACGAGGAGGAAGACCCCTCCTCGCTGCCTCCGCT
TCTCCAGCGGCTCCCCAAGGACTTCGGCGGCCCCTCCTTTGACGAAGACGAGGACGCCTA
CTCCTCCGACCCCGACGATGCTTCCCTCTCCGCTACGGTGGTCTTCAAGAGCGGCGCCCC
GGCCTCCGCTCGATCTCCGTTCCTGGATCTGCGGCGCTCCAGCCCCCGCGCTACCGATGA
CGACCCATACTCTACCTTCGTCGTCCACTCCACCGCACGCTCGGGGGGGACCTCCTCCAG
CCCTCGAGGGTCCGCCTCAGGCACATTCATCCGTCGCTCCGGGGGCTCGTCCAGCCCTCA
CGAATCCGTCTCTGGCACATTCATCCGCCGGACTAGCACCCCGTCGAGCCCCCGGGACTC
GGTCTCCGGCACATTCATCCGCCGACCAGGGAGCCCGTCGAGCCCCCGCGGGTCGTTCTC
TGGCACCTTCATTCGCCACACCAGCGGGGGTTCCAGTTCCTATGAATCTGCTTCTGGCGG
CGGCGGGGGTTTCGGGTCCTCTTTCTGGAGTCCAGCGGTGGAGCAGACAGAGGAGCTCCG
GCAACCGTCGCCTCTGATGCAGCAACAACAGCAGCAGCATTCAAGGCGGAAGCCATCAGT
GAGCTCGGCGCCAGACAGTGTTACCAGAGAGGATCCTTCCACCAAGTACGAGCTGCTCCA
TGAGCTTGGGAAAGGCTCATATGGTGCAGTGTACAAAGCAAGGGATCTCAGAACGCAGGA
GCTTGTGGCTGTCAAGATTATCTCACTAACAGAAGGGGAAGAAGGATATGAAGACATACG
GGGAGAAATTGAGATGCTGCAGCAGTGTAGCCATCCAAATGTTGTCCGCTACTTTGGAAG
CTACCAAGGAGAGGACTACCTATGGATAGTTATGGAGTACTGTGGTGGTGGAAGTGTTGC
TGATTTGATAGGCATCACAGAGGAGCCTCTTGATGAATCCCAAATAGCTTATATATGTAG
AGAAGCACTAAAGGGCCTTGCTTACCTGCACTCCATTTTTAAAGTTCATAGAGATATTAA
GGGTGGCAACATTCTTCTAACTGAGCAAGGCGAGGTGAAGTTGGGTGATTTTGGTGTAGC
TGCCCAGCTGACAAGAACCATGTCAAAGCGCAACACGTTCATTGGTACTCCACATTGGAT
GGCACCAGAGGTCATTCAAGAAAGTCGTTATGATGGAAAGGTAGATGTTTGGGCATTAGG
TGTATCTGCAATTGAGATGGCAGAGGGCATGCCACCAAGATCCACTGTACATCCAATGAG
AGTTATCTTCATGATATCCAGTGAACCAGCACCAATGCTGGAGGATAAGGAGAAATGGTC
TCTACTCTTCCATGATTTTATTGCAAAGTGTCTAACAAAAGATCCAAGACTTCGGCCTGC
TGCAAGTGAGATGGTGAAGCACAAATTTATTGAGAAGTGCAATAGTGGAGCTTCAAAAAT
GTTGGCGAAGATCAAGGAAGCGAAGAAGATTAGAGCCACACTTGCTGTGCAAAATGAACT
GTCTGACCCTGACAATACAATGCAAGATGTGCCTGTTCGAATAAATGAAGACTATGGGGA
AACTGTTCCTACAAATTCTCAGCAACACATGAATCATGGGACATATAATGATTGTCAGGC
AGGTGATTTTGGTACTATGATAGTTCATACTGAAGATGGCGACGAAGTGGCAGAATCACC
CATTTTCCCAAGAACAGAGTTCATACCTGGCCTTGGTAGCATCAATTCTTTCACACATGA
TCCAAAGAGAGCGGAACTTATTTCAAGTTTTTGGGCGGAGAACACAGGTGATAGTGATGC
CAATAAAGATCGGGATTTAGATGATCGTCCTGACATACAGGAATCAAAAGCAATCCCACC
TTTAACTGGAACAGTGAAGAAGCATATTGGTGCAGAAGGGACTATAAGACGCCATGATAA
TCAAGTTAATTTGTCACCAGGATTTGCGAACACAACTAAATTGAACAGCAGCCCGAGCCG
CAAAGCGTTTTCGGTTCAGGATAAGCTCTGGTCAATTTATGCTGCCGGCAACACTGTACC
AATACCATTTCTTAAGGCAATCGACATTTCACCACTAGCTCTAGTATCAGAAAATGAAGC
AGGAAATGGCCTGGCTGGGTCAAGTACAAATGATGCCTTGGAGGCAGTTAGGGAGCTGTT
CAGTGGTGATGGGCAGGCAAAGAAAGGACGGAAAGGGCAAAACGAAGTCCCTCTTCCTCC
GGGTGTGCACCACAGGCTAATGACAAGCCCCACACTGATGAACCTGGCTCAAGCGTTAGC
GTATCATAAAACGTGCTACGAGGACATGCCTCTACAAGATTCACAAGCGACGCAAGAGCA
GCAGACGATACAAAATCTTTGTGATACACTTCGAACCATACTGAGGTTGTAGATTTGCAA
GAGTGAAGGTTACAACCTTTGGAGTTCTGAAGCGCTGCATGGAGCCAAGGGTGAACATGG
CTTCTCATGGTGGACACTGAACCTGCTCGGGGTGGAGCCCCAAGGATCGAAGGAAGGCAT
GACATCTGTGTACCTTGGAGCAGGCCTAATGACAACTGCGTTTGAGCTTGTGGACGGCTG
GACGCTTTGGTGACTGGAAGCTGATTGACACAGGGATTTCTGTGGGGAGTGGAAATTTCT
GTCTCTGTTAATAGCCTCTAGGGGTTTCAGCGGTCGGTGTATGTAGAGACTGCATCGACA
TTTTGCTAATCAAATTTTGCGGCAGTAATGCCTATTGTAGTCTGGTTTTCAATCGTTGAC
AATGCAATTGTCTTCCTCCAAATAAAGAGAAATAGTTGAGCAGGAATAAAAAAAATGATT
TAG