Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90938
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:6169948:6174061:1 gene:SORBI_3001G080000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGACCTGCCGCAAGATGGCGCGCGTCGACGTCGCCGAGCTGAAGCAGCGCCTGGTG
AAGCGGCTGGGCCGGGAGCGGGCGGCCAAGTACTTCGCGCACCTCACCAGGCTGCTGAAT
CTGAAGCTCACCAAGGTGGAGTTCGACAGGCTCTGCGTCGCCACCATCGGCAAGGACAAC
ATCGCGCTGCACAACGCGCTCATTAGGGGCATCATAGGCAATGCTCTGTCGGGGGTGCCT
CCGCCCAGTCGGCAGGCGGTGACGGGGCAGTCAGGCACCACCACCGCCCCGAGCGGGCAG
TGCGTGAGCGTCGTGCTGCCGGTGGTGGGGAATGTGGGGGCAGTGCTTGATTCAGGTGAT
GGTGAACTGGCGAGGGAGCGGGGGGCGCCAGTCGGGAAGGTGGTGTCTGTGGAAGATGGG
GAGGAGGTGGAGCAGGTCAGGTCTGCTCCGTGCGTCCAGAGCCGGAGCCCGATAACAACG
CCATTGGGGATTTCAGTTGCTGGGGGCAGTGCTATGAGGGTAAGGAGGAGGTTGGATGAT
CCAGTGGCGTCATGCTATGATTCTGGACATTTGCTGGATACGAGTTCTCTGTGCGAGGGT
TTGCAGCGGCGGCTGCACAGCAACGGCACTGGAGTGACGGTGCAAGCCATCGATGCTTTG
AATCGTGGATTAGATGAGTTTTTGCGACGGTTGATTAAACCGGGTGTGGATTTGTCGAGG
GTAAGAGCCAGCAGTAGAAGAAATAGCAAAGCTAATGAAAGGTTTGCTGGTAGAATGAAT
TCGTTGCAACAATCAAATCAGGGTCAGTGTACAACGTTGCAAGATTTTGCAGTTGCTGTG
CAATCTGATCCACGTTTGCTTGGTCCAAATTGGCCCACACAAATCGAGAAGATACAGTCA
ATGTCCTTTGGAGGAGAATGA

Peptide Sequence

PEP ID

OQU90938
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:6169948:6174061:1 gene:SORBI_3001G080000 transcript:OQU90938 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MATCRKMARVDVAELKQRLVKRLGRERAAKYFAHLTRLLNLKLTKVEFDRLCVATIGKDN
IALHNALIRGIIGNALSGVPPPSRQAVTGQSGTTTAPSGQCVSVVLPVVGNVGAVLDSGD
GELARERGAPVGKVVSVEDGEEVEQVRSAPCVQSRSPITTPLGISVAGGSAMRVRRRLDD
PVASCYDSGHLLDTSSLCEGLQRRLHSNGTGVTVQAIDALNRGLDEFLRRLIKPGVDLSR
VRASSRRNSKANERFAGRMNSLQQSNQGQCTTLQDFAVAVQSDPRLLGPNWPTQIEKIQS
MSFGGE

Transcript Sequence

Transcript ID

OQU90938
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:6169948:6174061:1 gene:SORBI_3001G080000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCCTCTTGGCCCAAACAGCCACCAACCACAACCAGGCTCCCCTCCCTGTACCGCGCCCCA
TACACCCGCGCCCGCTGACACTCCTCCCCGCCAACCACCCTTCGCGTCGCCCACGACTCG
TCGTACACCCGGTCCTCCCTCCTTCGCTGAGCTCGTCGTTCCCCTCCCCCTCCCCCCCCG
ATCGCGCAGCTACTGCCAAACCCTAGCGTCGAATTCCCCGCCGAACCGACGATTCCAAGT
AAGTTCTGCTCCCCCTTGCGCTCCATTCTGCCCCAATTTGTTCGGGACCGTGCTGGTTCG
TTTAGATCTGAGCATCCGGGCTTGCATCGTTAGGGTTCCGACCGGGGCGAGCGCCGGGGC
CGCATTCCGGGAGCGGGTGATGGCGACCTGCCGCAAGATGGCGCGCGTCGACGTCGCCGA
GCTGAAGCAGCGCCTGGTGAAGCGGCTGGGCCGGGAGCGGGCGGCCAAGTACTTCGCGCA
CCTCACCAGGCTGCTGAATCTGAAGCTCACCAAGGTGGAGTTCGACAGGCTCTGCGTCGC
CACCATCGGCAAGGACAACATCGCGCTGCACAACGCGCTCATTAGGGGCATCATAGGCAA
TGCTCTGTCGGGGGTGCCTCCGCCCAGTCGGCAGGCGGTGACGGGGCAGTCAGGCACCAC
CACCGCCCCGAGCGGGCAGTGCGTGAGCGTCGTGCTGCCGGTGGTGGGGAATGTGGGGGC
AGTGCTTGATTCAGGTGATGGTGAACTGGCGAGGGAGCGGGGGGCGCCAGTCGGGAAGGT
GGTGTCTGTGGAAGATGGGGAGGAGGTGGAGCAGGTCAGGTCTGCTCCGTGCGTCCAGAG
CCGGAGCCCGATAACAACGCCATTGGGGATTTCAGTTGCTGGGGGCAGTGCTATGAGGGT
AAGGAGGAGGTTGGATGATCCAGTGGCGTCATGCTATGATTCTGGACATTTGCTGGATAC
GAGTTCTCTGTGCGAGGGTTTGCAGCGGCGGCTGCACAGCAACGGCACTGGAGTGACGGT
GCAAGCCATCGATGCTTTGAATCGTGGATTAGATGAGTTTTTGCGACGGTTGATTAAACC
GGGTGTGGATTTGTCGAGGGTAAGAGCCAGCAGTAGAAGAAATAGCAAAGCTAATGAAAG
GTTTGCTGGTAGAATGAATTCGTTGCAACAATCAAATCAGGGTCAGTGTACAACGTTGCA
AGATTTTGCAGTTGCTGTGCAATCTGATCCACGTTTGCTTGGTCCAAATTGGCCCACACA
AATCGAGAAGATACAGTCAATGTCCTTTGGAGGAGAATGATACACAGTAGCCTGTTATAG
CTGATGAACTTCTCTAAAGGGGATGTTGTTTGCTGGCATTGAAGTAAATGAAGCAGCAGA
CCAACAACAGGGCTACAAAATCTGAGTATTGCAGTACTCACAAGCAAGAAATACCAAGGC
CCAACAAGTGAACAAAGGGAGGTGCAATGGACAGTGCAGCATAAATTCTTTTGGAATATA
TAGCCTGTTGATAATAAATCGAAGAATCAACAAGGTTGGCTGAGGTCCAGGTCAAGCTGA
GTAACTCATTGGCAAACATACCCTCAGCTCTTGACACGAAAAGCATGTTCTGATATTACT
TTTAGAGATTTGTTGTGATGTTGTAATAGAGAATTTCCCCCTTATTACAGACTTAAATGG
AATCATTTTTCGCAGTGCTCATAAATGATGCCTTCAATGGGTCATTGCTCCTGTACATTG
TATTCAGATTGTGGCAACTACTGCTCGCAATTAAGAAAAAAAATTTAACCCTGTTGAATA
AATATATAAGCTTTTTTTGCTCAAGGACTTCAAATTCTCTCCTATGACTGGAATGTAAAT
GCTTTTGTTGTGCTTGTTTTCTTCTACAGTTCTTATCCTTTTTTCCTTTTATAAAATCTC
ACAGTGGGGGTTCCCCTGCTGTATTTTATGCTAAAAAAAATGTAAATGTTCTAAACATGC
ACTCATCCAACTGAGTTACAGTTGCCAGGATTATGATATGTAATTTTCTAACCGAATCAA
TTCTGTGGTCCTCTGGACTGTTGATTACTTGATTTCACTCTCCTATTACTGTAGTTTCTT
TTATTCTAGCATAGAAGAATTTCATATTCTGTTTTGGAATTTGTTTGCTTGAATACACTA
TGCACCTTGTTCTAGCATCCATGAACTGCACAACAGTTATTCAAATGTTTATTTGGTAAC
ATTTTTTTAATGTTTCCTTGGAGTAGGTATTCTTCGTTGTGAATTTTTCAGCACCTGGTA
CCATAAAAAGATTGCATCAGTTGTTTCAGGAACAAATGTCTCAGTTGAGTAATTTGGGTT
TATCCTTATAAAACTTTGCTTGTTTCTTTTTATTATCTTACTGGGACTCTGGGAGTGGTA
TAGACATATAGTGGCTGTAGAAAAATGATTTACCCTCTTAGAATGGTAAGCTCGAGTTCT
GGCTATCCTCTTTTGTTGAGAAGCATGGTGTCTTTGTTGAACTTTTTGCTATGATCTTAG
TATGTCAAATGCGATTTTATACTCAAATTTGACGATATAATTTTCTTGCAAATGGTGTTT
ATATCAGTTGCCTTCTTATTCTTTGATGTTTTCATATATCTATGCTGCCCACTAGGAACC
TTGATAACCAGGATGACCGGGCTGAATGCAACCAGGTGCATAAATATCCTTATTGAAGCT
AGCTGGAATCACTAGCTCAAATTAGGTTTGGTTCACAAGCAGTACACAGTTACACTGCAT
GTGAAATCCCAAGTTCCTGCTGTCTCAGATCTAAGAACCCATATGTGGTTGAGATTGAGA
AATACTGTCCGTTTTTCCCTTTTCTTTGAGAGGAAATGACCTCAATTCTGATGTTTAGTA
TACTGACCATTATCTCGAGATCTTGTACTTTTGCAGTTGTCTTGCAGGTTAGTGGTTCGT
GGTTTGCACCTCATGCCCATGGACACCGATGGAGATTCAGCAAGGTGCAATCAAACTTAT
TCACCTGCTGCTGAATTTGTGAATGCCATCTGCTGATTCATGTTGATCAAATCTACGATG
TCAAACAAGCACTCCTTTTTCTGGAATGGATTCTCATCAAAATAATATTTCCATTTCTGC
TGTTCTGCCAATTTACAGGGCTCTGGAGTCACAAACTCACTGTCATGAAGCGCAGGATTT
CTGGTTAGTGCTGCTTAAGCGTAGCTTATGATATTTCACTGTTTCCAAGTGAGTAAACTA
AGAAAGTTATGAAATAGCTAGATTACTATGTACCTGGAAAGTTTTAAAATTATGAGTGAA
TATTGTTCATGCCATTTATGGGCATTGGCTTGGGTTGATTCTGTTATCTGATAGGAGCAG
AATTAGAACAGGATATAATATTAGAGATTAACAATGGATTGTGCTGCAAAAGGTGCCCCC
TCAATATCACAAAGGGATATGGTGGTCTCAGTTCTGTCGAACTGTGTGAGCTTGCTCAGG
TTTAAGAAAACACTGAAACTTATTTCTACGAAGCCAATATCAGACATATCTTCATTATTG
TCTCGCACATATGAAGTACAAAAGACGATTCCAGACCTTATTATTTGGGATAAAAGGTGC
GCCATCAGTATCGCACGAGGGAGAAAAATAGAATAGTAATGTCTTAAGTTCTTGATATCC
TCTTCTGTTGAAGTATAGGACCTTTGTTGAACTCCCCCTGTATTTCTCTAAATCGACGAT
TTAATATTTCCTGCAAATATTTTATTACCAGCTCTTTGATGAAGTTTCTATATGCTGCAC
CGGGGATGGCCAGGAAGAGGATGACAGGTTTGGATGCAACCAGGTGCAGAACATCCTTAA
TTCCTTATTGGAAGCTGGTTGGGTTTTGTTACTTCAGACTTGGTTTGGTTGACATGCAGC
TCGCACTGTCTGTGAAATGTTGACTGGGCCTCCAAGTTTCTGCTGCCCCAGAATTTGAGA
ATTTGAGAAATGTTGCCTTTTCCCCCTTCCTTTGAGAGGATATTACCTGCATTATGATTT
GCTAGTATTACCAGTCATTTTCTCCAGATCTAGTGCAAGGTGCAATAAAAATTCTTCACC
TGTTGCTTACCACAAGTGGATGTCATCACTCATC