Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90918
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:5579855:5596726:1 gene:SORBI_3001G073500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCTCTTCTCCAGGAGGCCTCTCGCCGCCGCTCTCCACCTCGCGCCCCTCTCGCCTCCG
CTGCTGCTCCTCTTCGCGTCCGCGTCCTCCTCCTGCTCGCCCGCCGCCGCCGCTTCGGCC
TCCGGCTCCAGAGACTTCGATGGTTGTTTCCAAGGGATTTCGTGGCTCCACTCCTTTCCC
GAGCAGAGTTTGTGGATTTCATCAGGTTGCACTGCTGTAAGGATGGACAGTGGCGCGGTG
GAGACAGCGTCCACTGGGGCAGTATGGTCAACACCTTCGGCAGAACCGAGAAGCATTTCT
GTCGGGAAGGAGGTATTCTGCAATAGGTCACTCAACATGAGGAACATTACAGCAGTGGGA
TTTGATATGGACTACACTCTGGCACAGTACAAGCCTGAGACCTTCGAGGCCCTTGCTTAC
TATGGTACAATAGAGAAGCTTGTGAAGGATCTGCGCTACCCTGAAGAGTTGCTGACTTGG
GAGTTTGATTGGAAATATATGGTCAGAGGACTAGTTCTTGATAAGAAGAGAGGAAATATC
TTGAAGATGGATCGACACAAGTATGTAAAAGTTGCATACCATGGTTTTAAGGAACTGTCG
AAAGAAGAAAAAGTTGCTGCTTATGGGAGTACATTGATAAGAGATTCATTTGATGAACCT
GATTATGCCCTTATAGATACGCTTTTCTCACTGGGTGAAGCTTATCTATTTGCTCAGCTT
GTTGATTTCATGGACAAGAATCCTGGAAAAGTACCTGCAGGCACAGACTATCCACTTATG
TACAGAGATGTGAGGTCTGCGGTTGATTTGTGTCATCGTGATGGAACTTTAAAGCGCATG
GTGGCGAAGGATCCTGCCAGGTACATCAATGAGGACTTGGCAATTGTACCAATGCTTGAA
ATGATCAGGAAATCTGGACGCTCAACATTCTTAGTGACGAATAGTTTGTGGGACTACACT
GATGTTGTCATGAACTACCTTTGTGGGCCATACACTTCGGATGTAGGCTCTGGTCTCAAC
CACAAATGGCTTCAATATTTTGATATTGTAATAACAGGCAGTTCGAAGCCAAGTTTCTTC
CATGATGATAACCGTGCAGGCCTCTTTGAAGTTGAGCCTGATTCTGGAAAGCTTCTGAAT
GCTGATATTCAGGCTAGTAAATTTATTGGAAGCCCAAGATCAAGTCATCAACACTCAACA
CCAGTTCAGAAAGTTTACCAGGGAGGCAATGTTGGTCATCTCCACAGATTACTTTCTGTT
GCTTCTAGTTCACAGATTCTCTATGTTGGTGATCACATATATGGAGATATTCTGCGGAGC
AAGAAAGTTCTGGGTTGGCGGACTATGCTAGTAATTCCAGAACTAGAACAAGAGGTGAAG
CTTCTCTCAGAATCAAAGTCTACAAGGAAGGAGCTTAGACATCTTAGAATGAAGCGTGAT
TCAATTGAAGACAGAATCCATCATCTTGAATGGTCTCTTAAACTTGATGATGTCACAGAA
AATCAGAAGGAGAAGTTGTTCTCTGAACATGACAATCTGCTGAAACAGAGAGAGCATGTT
CGCCGCCTTCATCAAGAGGCTCAGAGGCAACATCATCAGAAGTTTCATAAGGTGTGGGGA
CAGCTCATGAAGACTGGGTACCAAAATTCCAGATTTGCTCATCAGGTTGAGAGATTTGCA
TGCTTGTACAGCAGCCAGGTTACAAACTTCGGTTTGTATTCCCCCAACAAGTACTATCGT
CCGAGCGAAGATTACATGCCCCATGAGTTTGATGTGCTTGGGCTGTAG

Peptide Sequence

PEP ID

OQU90918
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:5579855:5596726:1 gene:SORBI_3001G073500 transcript:OQU90918 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MLFSRRPLAAALHLAPLSPPLLLLFASASSSCSPAAAASASGSRDFDGCFQGISWLHSFP
EQSLWISSGCTAVRMDSGAVETASTGAVWSTPSAEPRSISVGKEVFCNRSLNMRNITAVG
FDMDYTLAQYKPETFEALAYYGTIEKLVKDLRYPEELLTWEFDWKYMVRGLVLDKKRGNI
LKMDRHKYVKVAYHGFKELSKEEKVAAYGSTLIRDSFDEPDYALIDTLFSLGEAYLFAQL
VDFMDKNPGKVPAGTDYPLMYRDVRSAVDLCHRDGTLKRMVAKDPARYINEDLAIVPMLE
MIRKSGRSTFLVTNSLWDYTDVVMNYLCGPYTSDVGSGLNHKWLQYFDIVITGSSKPSFF
HDDNRAGLFEVEPDSGKLLNADIQASKFIGSPRSSHQHSTPVQKVYQGGNVGHLHRLLSV
ASSSQILYVGDHIYGDILRSKKVLGWRTMLVIPELEQEVKLLSESKSTRKELRHLRMKRD
SIEDRIHHLEWSLKLDDVTENQKEKLFSEHDNLLKQREHVRRLHQEAQRQHHQKFHKVWG
QLMKTGYQNSRFAHQVERFACLYSSQVTNFGLYSPNKYYRPSEDYMPHEFDVLGL

Transcript Sequence

Transcript ID

OQU90918
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:5579855:5596726:1 gene:SORBI_3001G073500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCTCTTCTCCAGGAGGCCTCTCGCCGCCGCTCTCCACCTCGCGCCCCTCTCGCCTCCG
CTGCTGCTCCTCTTCGCGTCCGCGTCCTCCTCCTGCTCGCCCGCCGCCGCCGCTTCGGCC
TCCGGCTCCAGAGACTTCGATGGTTGTTTCCAAGGGATTTCGTGGCTCCACTCCTTTCCC
GAGCAGAGTTTGTGGATTTCATCAGGTTGCACTGCTGTAAGGATGGACAGTGGCGCGGTG
GAGACAGCGTCCACTGGGGCAGTATGGTCAACACCTTCGGCAGAACCGAGAAGCATTTCT
GTCGGGAAGGAGGTATTCTGCAATAGGTCACTCAACATGAGGAACATTACAGCAGTGGGA
TTTGATATGGACTACACTCTGGCACAGTACAAGCCTGAGACCTTCGAGGCCCTTGCTTAC
TATGGTACAATAGAGAAGCTTGTGAAGGATCTGCGCTACCCTGAAGAGTTGCTGACTTGG
GAGTTTGATTGGAAATATATGGTCAGAGGACTAGTTCTTGATAAGAAGAGAGGAAATATC
TTGAAGATGGATCGACACAAGTATGTAAAAGTTGCATACCATGGTTTTAAGGAACTGTCG
AAAGAAGAAAAAGTTGCTGCTTATGGGAGTACATTGATAAGAGATTCATTTGATGAACCT
GATTATGCCCTTATAGATACGCTTTTCTCACTGGGTGAAGCTTATCTATTTGCTCAGCTT
GTTGATTTCATGGACAAGAATCCTGGAAAAGTACCTGCAGGCACAGACTATCCACTTATG
TACAGAGATGTGAGGTCTGCGGTTGATTTGTGTCATCGTGATGGAACTTTAAAGCGCATG
GTGGCGAAGGATCCTGCCAGGTACATCAATGAGGACTTGGCAATTGTACCAATGCTTGAA
ATGATCAGGAAATCTGGACGCTCAACATTCTTAGTGACGAATAGTTTGTGGGACTACACT
GATGTTGTCATGAACTACCTTTGTGGGCCATACACTTCGGATGTAGGCTCTGGTCTCAAC
CACAAATGGCTTCAATATTTTGATATTGTAATAACAGGCAGTTCGAAGCCAAGTTTCTTC
CATGATGATAACCGTGCAGGCCTCTTTGAAGTTGAGCCTGATTCTGGAAAGCTTCTGAAT
GCTGATATTCAGGCTAGTAAATTTATTGGAAGCCCAAGATCAAGTCATCAACACTCAACA
CCAGTTCAGAAAGTTTACCAGGGAGGCAATGTTGGTCATCTCCACAGATTACTTTCTGTT
GCTTCTAGTTCACAGATTCTCTATGTTGGTGATCACATATATGGAGATATTCTGCGGAGC
AAGAAAGTTCTGGGTTGGCGGACTATGCTAGTAATTCCAGAACTAGAACAAGAGGTGAAG
CTTCTCTCAGAATCAAAGTCTACAAGGAAGGAGCTTAGACATCTTAGAATGAAGCGTGAT
TCAATTGAAGACAGAATCCATCATCTTGAATGGTCTCTTAAACTTGATGATGTCACAGAA
AATCAGAAGGAGAAGTTGTTCTCTGAACATGACAATCTGCTGAAACAGAGAGAGCATGTT
CGCCGCCTTCATCAAGAGGCTCAGAGGCAACATCATCAGAAGTTTCATAAGGTGTGGGGA
CAGCTCATGAAGACTGGGTACCAAAATTCCAGATTTGCTCATCAGGTTGAGAGATTTGCA
TGCTTGTACAGCAGCCAGGTTACAAACTTCGGTTTGTATTCCCCCAACAAGTACTATCGT
CCGAGCGAAGATTACATGCCCCATGAGTTTGATGTGCTTGGGCTGTAG