Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90820
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:3846719:3850110:-1 gene:SORBI_3001G052100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCACCCCCTCACGCTCTCCTCCACCGCGCTCCTCCGCCTCATCAAGTCGCTCTCGCCG
GCGGCGGGGCCGAGGGCCCACCTCGCGGCCGCGGCGATCCACGGCCTCCTCTTCAAGGAA
GGGCTCCTCCACGCCGGGTCGCACCTCCCCACGGCGCTGCTGTCGGCCTACGCAGCGCTC
GGGAGGCCGCGCCACGCGCGCGACCTGTTCGACGAGATGCCCGACCCGGGCCTCGTCACC
CGCACGGCCATGGCTCGCGCGCACGCGGCGTCCGGGCAGACGGCCCAGGCGCTCGCCGTG
TTCGGGGACATGCTCGCGGACGGCGTCCTCCCCGACAACGTGGCCCTGGCAGTCGCGCTC
GCGGCGTGCCATGGGACAGGCTCGTTCCCTGCAGCTCTGGGGATGGCGGCGGCCAGGAGA
CCTGGGAAGATGGTGCATGCCCTTATTGTGACAAGTGGAATTGTCCCGGATGTGTTCGTC
TCCACTGAGCTGATCAGGTTGTACGGGGAGTACGGCGAGCTCTTGGTCTCCCGGAGGTTG
TTTGATGCGATGCCGGTGAAGAGCACTGTTTCGTGGAACGCCATGGTGCATCAGTATATC
AGGCACAGCAATGTTGGAGATGCGTATGAGCTGTTTCTTGCAATGCCAAAGAGGGATGTA
GTGTCATGGAACACGATAATTGCCGGGTACTGCCTCATTGGCCGATTTATGGAGGCGCTA
GAACTGTTCCGTCAGATGATGTCGCCATCCTCATGTCCGGTGCATCCAAACGGACCTACA
ATTAGCACTGTCCTTGCTGCTTGTGCGGGTGCAGGTTGTTTAGAGACTGGGATTTGGGTC
CATGCGTACATTGACAGGAATCGCATGAATGACGATGGGTCATTGGATCGGTCCTTGATA
GACATGTACGCCAAATGTGGAAGCATTGAAAAAGCCCTTCAGGTGTTTGAAAAGGCACCT
GGGAAGAGGGATCTGTACTCTTGGACGACTGTGATTTGTGGACTGGCAATGCACGGTAAG
GCAGCTGATGCTCTAAGAATGTTTGGCATGATGCAAGACAATGGTATACGACCAGATGAT
GTTACTCTTGTTGGGGTCCTTAATGCTTGCGCACATGGTGGACTTGTAGATGAAGGCCTT
CACCACTTCTACTCTTTAGAGAAGTATGCAATCACACCCAAAATTGAACACTATGGATGT
GTCATTGATCTTCTTGGTCGTGTTGGGCGATTGCAAGAAGCATACAGCATTATCAGGACC
ATGCGGATGAAGCCTAATGCAGTAATCTGGGGTGCATTCTTGAATGCATGCAAAGTTCAC
AGCAACGTGGAGCTTGGCGAGATTGCAGCAGCTGAACTCACCAGGTTAGATCCAGATGAC
CCCTGGGCAAAGGTGATGCTATCCAGCTTGTATGCAAAAGCACAGGACTGGAGCAGTCTA
GCCAGGGAGAGGAGGGAGATGAACAGCTTGCAGATGAAGAAAACACCAGGGTGTAGCTCA
ATTGAGCTTGATGGAGAGGTGCATGAGTTTGTTGCTGGTAGTTTTCAGCATCCTCAGCAT
GGTGAAATTTGCACTGTACTAGAGAACGTCGAAGCACAAACACATGCTGGCTAA

Peptide Sequence

PEP ID

OQU90820
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:3846719:3850110:-1 gene:SORBI_3001G052100 transcript:OQU90820 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MHPLTLSSTALLRLIKSLSPAAGPRAHLAAAAIHGLLFKEGLLHAGSHLPTALLSAYAAL
GRPRHARDLFDEMPDPGLVTRTAMARAHAASGQTAQALAVFGDMLADGVLPDNVALAVAL
AACHGTGSFPAALGMAAARRPGKMVHALIVTSGIVPDVFVSTELIRLYGEYGELLVSRRL
FDAMPVKSTVSWNAMVHQYIRHSNVGDAYELFLAMPKRDVVSWNTIIAGYCLIGRFMEAL
ELFRQMMSPSSCPVHPNGPTISTVLAACAGAGCLETGIWVHAYIDRNRMNDDGSLDRSLI
DMYAKCGSIEKALQVFEKAPGKRDLYSWTTVICGLAMHGKAADALRMFGMMQDNGIRPDD
VTLVGVLNACAHGGLVDEGLHHFYSLEKYAITPKIEHYGCVIDLLGRVGRLQEAYSIIRT
MRMKPNAVIWGAFLNACKVHSNVELGEIAAAELTRLDPDDPWAKVMLSSLYAKAQDWSSL
ARERREMNSLQMKKTPGCSSIELDGEVHEFVAGSFQHPQHGEICTVLENVEAQTHAG

Transcript Sequence

Transcript ID

OQU90820
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:3846719:3850110:-1 gene:SORBI_3001G052100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCACCCCCTCACGCTCTCCTCCACCGCGCTCCTCCGCCTCATCAAGTCGCTCTCGCCG
GCGGCGGGGCCGAGGGCCCACCTCGCGGCCGCGGCGATCCACGGCCTCCTCTTCAAGGAA
GGGCTCCTCCACGCCGGGTCGCACCTCCCCACGGCGCTGCTGTCGGCCTACGCAGCGCTC
GGGAGGCCGCGCCACGCGCGCGACCTGTTCGACGAGATGCCCGACCCGGGCCTCGTCACC
CGCACGGCCATGGCTCGCGCGCACGCGGCGTCCGGGCAGACGGCCCAGGCGCTCGCCGTG
TTCGGGGACATGCTCGCGGACGGCGTCCTCCCCGACAACGTGGCCCTGGCAGTCGCGCTC
GCGGCGTGCCATGGGACAGGCTCGTTCCCTGCAGCTCTGGGGATGGCGGCGGCCAGGAGA
CCTGGGAAGATGGTGCATGCCCTTATTGTGACAAGTGGAATTGTCCCGGATGTGTTCGTC
TCCACTGAGCTGATCAGGTTGTACGGGGAGTACGGCGAGCTCTTGGTCTCCCGGAGGTTG
TTTGATGCGATGCCGGTGAAGAGCACTGTTTCGTGGAACGCCATGGTGCATCAGTATATC
AGGCACAGCAATGTTGGAGATGCGTATGAGCTGTTTCTTGCAATGCCAAAGAGGGATGTA
GTGTCATGGAACACGATAATTGCCGGGTACTGCCTCATTGGCCGATTTATGGAGGCGCTA
GAACTGTTCCGTCAGATGATGTCGCCATCCTCATGTCCGGTGCATCCAAACGGACCTACA
ATTAGCACTGTCCTTGCTGCTTGTGCGGGTGCAGGTTGTTTAGAGACTGGGATTTGGGTC
CATGCGTACATTGACAGGAATCGCATGAATGACGATGGGTCATTGGATCGGTCCTTGATA
GACATGTACGCCAAATGTGGAAGCATTGAAAAAGCCCTTCAGGTGTTTGAAAAGGCACCT
GGGAAGAGGGATCTGTACTCTTGGACGACTGTGATTTGTGGACTGGCAATGCACGGTAAG
GCAGCTGATGCTCTAAGAATGTTTGGCATGATGCAAGACAATGGTATACGACCAGATGAT
GTTACTCTTGTTGGGGTCCTTAATGCTTGCGCACATGGTGGACTTGTAGATGAAGGCCTT
CACCACTTCTACTCTTTAGAGAAGTATGCAATCACACCCAAAATTGAACACTATGGATGT
GTCATTGATCTTCTTGGTCGTGTTGGGCGATTGCAAGAAGCATACAGCATTATCAGGACC
ATGCGGATGAAGCCTAATGCAGTAATCTGGGGTGCATTCTTGAATGCATGCAAAGTTCAC
AGCAACGTGGAGCTTGGCGAGATTGCAGCAGCTGAACTCACCAGGTTAGATCCAGATGAC
CCCTGGGCAAAGGTGATGCTATCCAGCTTGTATGCAAAAGCACAGGACTGGAGCAGTCTA
GCCAGGGAGAGGAGGGAGATGAACAGCTTGCAGATGAAGAAAACACCAGGGTGTAGCTCA
ATTGAGCTTGATGGAGAGGTGCATGAGTTTGTTGCTGGTAGTTTTCAGCATCCTCAGCAT
GGTGAAATTTGCACTGTACTAGAGAACGTCGAAGCACAAACACATGCTGGCTAAAGGGAT
GTGGATGCCTCATGCCCTCATCAGTTGAGGTTTTTGTTCTGCCAATGAATGTTAGCATGT
AGTTACAAGTTTCATGGGCCTTCAGTCCCTTCACTGGTAGATTAACTGACCTTTGTGCTT
TCAATTAGCCTGTGGAGGTCTGAACCTGGCCATGTTGGTAAGAATTGAAGGAGGTTACCA
TTAGGGACCAGAGTGAATGACAACATGCTGACAAAAATCTGTTCAGGTTGACCATGCTGG
AAGTTGTACTAACAATTGAAGCTAGTGGAGGCATAGCACCAATTGTGATTGTGCTGCAGC
TTTGTATGTCAGTGGACAAGAGGTACATGGATGGAAATGCACCACATTACTATTTTGCTT
TGTTTCTAATGGCTACCAAGTTATTTGATTTATTCTGGCGTCCCATCTTGATTATTACCC
TTCTCTCTCTCTCTCTCTCTGACAATCTACATAGGTATACAAATAGAACTAGAGTATAGT
GGATATTTCTCAGTTATAATTTAGAAAAGCTGATATTTAGCCTGGCAGCCTGGCTTTGAA
CCTCCTTCCATACATATATAAAGCATTTTTATGATCTAGATAATGGAATTATTTTGAAAC
AAATGAAATTGTTAGTTGATTAGTCCCCTTGGAGATTGTCTTCATGTTAGAATGGCTTCT
TCGAGTTACTTCAAATGAAAACAAATGAAAATTCTATAATTCAGTACGATCATGTAACCC
TGCAGTGATACATTTCATACAATTCTCTGCAATGCTGGCATTCATGTAATCCTAGGTGGC
GGTTATGTGTAACTAACAAGTAACAGATGCAAACTTTCTTTTCATGGAATATATAGCTGA
TATAAATTGCAATGCAGGTGTATCAGAGAGAAGCACTTCAAGGTTAATTTGTTGAGCAAA
CTGGAGATGCTAGAATTGGTATTTTGGCAGGTGTTGTATGCTTTCCAGCATGGCGTGTTT
TATTCAACTGGTCAAGTCTTTCAGAAGCTGGAAGCTGAGCATGGATAGCACTTTGTGTTG
TATCACAATGGGTCCATTTGCCGATGATCATTGAATCGAATTGCTCTCTGAGTGGTGAAT
GCTCTGAAGACTTCAAAATATGGTAGATCTGAGATTATCTTTCATGCATATGCATGTCGA
GGAAGGTATGGAGGTGATGCGTGTTCTTCAGAAAGTGGAGATGCATCAAGTGAACCTCGA
GTGAAATTATATGGTGCATTTGTTAGCCAATTAGCTAGGACTGTTCATACAGCTGTTTGA
TTAAGCCAAATACCTAATTGTATTGTCCATCTAGTAGAACCTAACTGCAACTTGCCCTCT
TATAATCAACAAAAATACGTTTGCGTTTGCCCTAAAAAAGGTTGAGGTATGGACCATCAC
ATGCAAGAAAACAAAGGACCTGCTATTGTCTTCTGTGCGGTTCTCCCAGCCTTTGCATAG
GAATTTGATGATCAATACACTCAATATTTACGTGCTTTACGCAGGGCGCCACCCGCAGGA
ATTTGTTATCCAAACAATGGTGCGTTACTTAACTCAAACGTGCTCAATGAATTGTCTCAC
GAACTCTATGCAGACGGTGATCCAGCAGCATCTTACTGCAGCGGCATATGGACTATTGAC
TACATTGATACATCTCTAACCAGTAGAGCTCAATTGCGGGATTCTTCCCGTCCGAACGTT
CGGACGGGAGTCTCGGTCCTGATTCCCGCGCGATGTTCCCGCGTGTGGACGCGAGCAGCT
GCTACTCGCATGTACGGGCGACGGTTTTCATC