Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90801
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:3600874:3606131:1 gene:SORBI_3001G049200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCGAGCGCGAGGGGGAGCGTGTGGGAGATCCAGCCGCGCGACGTGGAGGCGGCG
GGGCTCGCCGCAGCCGACGCGGCCGCGTTCGTCGCCGCGCTCCGCTCCGCCGCGGCCGCC
GCGGGCTCGGGAGCCACGCGGGACGCCGTGTGGGCGGCGGTTGCGGCGGCGGGGGTGCTG
CGGCCGGAGCACCCGCACGCGCTCCACCAGCTCGTCTACTACTCCACCTACGCTGGGTGG
GACCGCGACGCCCGGGGCCCGCCGCCGTACTGGTTCCCGTCTCCAATTGACTGTAAGCAA
ACAAACCTGGGGAGATTGATGGAAGCAAATGGACCAAAGCTGTTAGGATCATCATACAAG
GACCCTATATCAAGTCTTAGCCACTTTTACAGGTTTTCCGTAGAGAACCAAGAGGTCTAC
TGGTCAATGGTGCTAAAGCAACTAGCAGTCAATTTTAAACAAGAACCAAGGTCAATTCTG
AGTACATCAGATAGATCAAAGAAAGGGGGGACATGGCTTCAAGGTGCAGTGCTCAATATA
GCTGAATGTTGTCTGCTGCCTTGTCCTTCCCTGAAGAGGACAGATGACAGTACAGCTATC
ATTTGGAGGGATGAAGGCCTTGATGATTATCCAGTGAACCGTATGTCACTGAAGGAGCTT
CGCGGTCAAGTGATAACTGTTGCACATGCCTTAGATGCCATGTTTGAGAAGGGGGACCGG
ATTGCAATAGACATGCCTATGACATGCAATGCAGTCATAATATATTTGGCGATCATCCTT
GGTGGCTTTGTTGTTGTATCTATAGCGGATAGTTTTGCACCTCAGGAGATTGGTAGTCGT
ATGGGTGTCTCAAAAGCAAAAGCAATTTTTACCCAGGATTTCATTGTTAGAGGAGGGAAG
AAAGTTCCACTTTACAGTCGTGTCGTACAAGGGACTTCGTCTAAAGCTGTTGTGATTCCT
GCAATTGGAGACTCTATTGGAATTACGCTAAGGAATGGTGATATGTCATGGAAAGATTTT
CTTTCTCGTGCTGCTGGAAGGTCATCTTCTTATTCTCCAGTTTATCAATCTGTGGATGCA
CTAACTAATATACTATTTTCTTCAGGAACAACTGGGGAGCCAAAAGCAATACCGTGGACA
CAACTTTCTCCCATAAGATGTGCATCTGATACCTGGGCGCATTTGGATGTTCGTCCATGT
GAAATAGGTTGCTGGCCAACTAATCTGGGCTGGGTTATGGGACCAATAATCATATACTCA
TGCTTTCTAAATGGGGCGGCTTTGGCTTTATATCATGGATCTCCACTTGGACGCGATTTC
TGCAAGTTTGTACAGGATGCTGGTGTGACTGTATTAGGAAGTGTGCCTAGCTTGGTGAAG
TCATGGAAAGCTGGGAACTGTGCTGAAGGGCTTGACTGGACCAAAATCAGAGTACTAGGC
ACAACAGGGGAGGCTTCTGATATTGATGACAATCTGTGGCTAACTTCGCGTGCCTCATAC
AAGCCCATTGTTGAGTGCTGTGGGGGCACAGAGTTGGCATCCTCATACATTCAAGGGAGT
CTTTTGCGACCACAGGTCTTTGGAGCTTTTAGTGGTGCATCAATGTCCACTGGGTTTGTC
ATACTTGATGAACAGGGAACTCCGTATCAACTCAGACGACATGGAGATATAATCCAGAGG
ACAGTAGGTGGGTACTATATTGTACAGGGAAGGGCGGATGACACCATGAACCTTGGAGGA
ATTAAGACCAGTTCAGTTGAGATAGAGCGGGTATGCAACAGAGCTGACGAGTGTCTGCTA
GAAACAGCAGCAGTTAGCATCAAGCCTTCTGGCGGGGGACCAGAACATCTAGCTATCTTA
GCAGTGCTAAAAGATAGATCGGCCCAGTATGACGTGAATCTTCTCAAGAGGAAGTTTCAG
ACAGCCATTCAGAAGAACCTTAACCCTCTCTTCAAGGTGAGCTATGTCAAAGTCGTTCCT
GAGTTCCCAAGAACAGCTTCGAACAAGCTGCTGAGAAGGGTTCTGAGGGATCAACTAGCG
CAGGAACTCTCAAATCGGAGCAAGCTATGA

Peptide Sequence

PEP ID

OQU90801
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:3600874:3606131:1 gene:SORBI_3001G049200 transcript:OQU90801 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAASARGSVWEIQPRDVEAAGLAAADAAAFVAALRSAAAAAGSGATRDAVWAAVAAAGVL
RPEHPHALHQLVYYSTYAGWDRDARGPPPYWFPSPIDCKQTNLGRLMEANGPKLLGSSYK
DPISSLSHFYRFSVENQEVYWSMVLKQLAVNFKQEPRSILSTSDRSKKGGTWLQGAVLNI
AECCLLPCPSLKRTDDSTAIIWRDEGLDDYPVNRMSLKELRGQVITVAHALDAMFEKGDR
IAIDMPMTCNAVIIYLAIILGGFVVVSIADSFAPQEIGSRMGVSKAKAIFTQDFIVRGGK
KVPLYSRVVQGTSSKAVVIPAIGDSIGITLRNGDMSWKDFLSRAAGRSSSYSPVYQSVDA
LTNILFSSGTTGEPKAIPWTQLSPIRCASDTWAHLDVRPCEIGCWPTNLGWVMGPIIIYS
CFLNGAALALYHGSPLGRDFCKFVQDAGVTVLGSVPSLVKSWKAGNCAEGLDWTKIRVLG
TTGEASDIDDNLWLTSRASYKPIVECCGGTELASSYIQGSLLRPQVFGAFSGASMSTGFV
ILDEQGTPYQLRRHGDIIQRTVGGYYIVQGRADDTMNLGGIKTSSVEIERVCNRADECLL
ETAAVSIKPSGGGPEHLAILAVLKDRSAQYDVNLLKRKFQTAIQKNLNPLFKVSYVKVVP
EFPRTASNKLLRRVLRDQLAQELSNRSKL

Transcript Sequence

Transcript ID

OQU90801
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:3600874:3606131:1 gene:SORBI_3001G049200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGCACACGGCCGCACGCGCCGGAGGTCATGTTCCAGACGGCCAGACCACACCTCCTACCT
ACTCGATCGAAAAGAACCCCACCTGGCCACCTTCCCCGAGCCCGCGACTGACGGCTCAGC
TTCCGCGCGGCACGGTCAAACGGACACCGCAGGCGGCAGGCCGGCCGAAGAGCACAAGCG
AGCAAGTCCAAACCGGAAGAGGCGATCGCTAGCCGCGAGTGCGGGGCGGCCATCATCATG
GCGGCGAGCGCGAGGGGGAGCGTGTGGGAGATCCAGCCGCGCGACGTGGAGGCGGCGGGG
CTCGCCGCAGCCGACGCGGCCGCGTTCGTCGCCGCGCTCCGCTCCGCCGCGGCCGCCGCG
GGCTCGGGAGCCACGCGGGACGCCGTGTGGGCGGCGGTTGCGGCGGCGGGGGTGCTGCGG
CCGGAGCACCCGCACGCGCTCCACCAGCTCGTCTACTACTCCACCTACGCTGGGTGGGAC
CGCGACGCCCGGGGCCCGCCGCCGTACTGGTTCCCGTCTCCAATTGACTGTAAGCAAACA
AACCTGGGGAGATTGATGGAAGCAAATGGACCAAAGCTGTTAGGATCATCATACAAGGAC
CCTATATCAAGTCTTAGCCACTTTTACAGGTTTTCCGTAGAGAACCAAGAGGTCTACTGG
TCAATGGTGCTAAAGCAACTAGCAGTCAATTTTAAACAAGAACCAAGGTCAATTCTGAGT
ACATCAGATAGATCAAAGAAAGGGGGGACATGGCTTCAAGGTGCAGTGCTCAATATAGCT
GAATGTTGTCTGCTGCCTTGTCCTTCCCTGAAGAGGACAGATGACAGTACAGCTATCATT
TGGAGGGATGAAGGCCTTGATGATTATCCAGTGAACCGTATGTCACTGAAGGAGCTTCGC
GGTCAAGTGATAACTGTTGCACATGCCTTAGATGCCATGTTTGAGAAGGGGGACCGGATT
GCAATAGACATGCCTATGACATGCAATGCAGTCATAATATATTTGGCGATCATCCTTGGT
GGCTTTGTTGTTGTATCTATAGCGGATAGTTTTGCACCTCAGGAGATTGGTAGTCGTATG
GGTGTCTCAAAAGCAAAAGCAATTTTTACCCAGGATTTCATTGTTAGAGGAGGGAAGAAA
GTTCCACTTTACAGTCGTGTCGTACAAGGGACTTCGTCTAAAGCTGTTGTGATTCCTGCA
ATTGGAGACTCTATTGGAATTACGCTAAGGAATGGTGATATGTCATGGAAAGATTTTCTT
TCTCGTGCTGCTGGAAGGTCATCTTCTTATTCTCCAGTTTATCAATCTGTGGATGCACTA
ACTAATATACTATTTTCTTCAGGAACAACTGGGGAGCCAAAAGCAATACCGTGGACACAA
CTTTCTCCCATAAGATGTGCATCTGATACCTGGGCGCATTTGGATGTTCGTCCATGTGAA
ATAGGTTGCTGGCCAACTAATCTGGGCTGGGTTATGGGACCAATAATCATATACTCATGC
TTTCTAAATGGGGCGGCTTTGGCTTTATATCATGGATCTCCACTTGGACGCGATTTCTGC
AAGTTTGTACAGGATGCTGGTGTGACTGTATTAGGAAGTGTGCCTAGCTTGGTGAAGTCA
TGGAAAGCTGGGAACTGTGCTGAAGGGCTTGACTGGACCAAAATCAGAGTACTAGGCACA
ACAGGGGAGGCTTCTGATATTGATGACAATCTGTGGCTAACTTCGCGTGCCTCATACAAG
CCCATTGTTGAGTGCTGTGGGGGCACAGAGTTGGCATCCTCATACATTCAAGGGAGTCTT
TTGCGACCACAGGTCTTTGGAGCTTTTAGTGGTGCATCAATGTCCACTGGGTTTGTCATA
CTTGATGAACAGGGAACTCCGTATCAACTCAGACGACATGGAGATATAATCCAGAGGACA
GTAGGTGGGTACTATATTGTACAGGGAAGGGCGGATGACACCATGAACCTTGGAGGAATT
AAGACCAGTTCAGTTGAGATAGAGCGGGTATGCAACAGAGCTGACGAGTGTCTGCTAGAA
ACAGCAGCAGTTAGCATCAAGCCTTCTGGCGGGGGACCAGAACATCTAGCTATCTTAGCA
GTGCTAAAAGATAGATCGGCCCAGTATGACGTGAATCTTCTCAAGAGGAAGTTTCAGACA
GCCATTCAGAAGAACCTTAACCCTCTCTTCAAGGTGAGCTATGTCAAAGTCGTTCCTGAG
TTCCCAAGAACAGCTTCGAACAAGCTGCTGAGAAGGGTTCTGAGGGATCAACTAGCGCAG
GAACTCTCAAATCGGAGCAAGCTATGACCTTTGGGATTGTTCGGCCTTCTTTCAAATAAA
GGAGGCATCGTTTACCGCGTGTCCATTGTTGATGTGTTGTGTTGTATTATACTATTGTCA
ATGCATGTCAAGATGATACTACAAAATTTTCCCCTCTTTTGTAAAACTTCAAGCCTTATA
CGTTTGTTGCCCTTTTGAAAAGGGAACCATATTCCAGAGAACGTTTGTAAAGGGCAATAC
ATTTTATCTGATCATTTGAAAGACTAAAATTCAAAGAACCCAGATGTTGCACTGGGGTTG
TGTGTGTGTCAAATGATAGTGTTGACGAATAAACCGGGTGCGTGCATGATTGTGTTACAT
GCTATGTACCAATCGGTGGCAATTGCATCAAA