Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90785
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:3317169:3320900:1 gene:SORBI_3001G044600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTGGTGGTGGCGCCCTCCTCCGCATGCTCCTTCCTGCTCGCGCACCCGTCCGGCCCC
GCGCGCCCTCGCCGTCCCCACCCCATGAACTCGACCGCCAAACCCCTCTCCCATACCCTC
ACCATCCGCTGCGCCGCCACAACCGCGGCGGGGCGCCCGGGACCCCCACCGCCGAAGCTC
CCGGGACCCCCACCGCTGCCACCGCCGAAGCTGGTCCGCTGCGCTGCTCTCGACCGCCAG
GCGGCGCGCGCAAGCCGCCTCCGCTTCGTGCGCAAGCTCCTCACCCTCCTCCTCTCCAAG
CCACGCCATTTCCTCCCGCTCCGCGTGCTCAACCGCTGCCGCCGCTTCCTCGGCCTCCCG
CGCCGCGGCCGCCCGCTCATCCCCATGGTCCTCCGATACCCGGCCCTCTTCCGCCTCTTC
CAGGCCCATACCTCCCTCCCGCTCTCCCCGTCCCTCTCCACCCTCGCGGTCGGGCTCACT
CCCGCCGCCGAGGCGCTCGCCGCCGACCTTGCCGCGCTCCGCGCCACCAGCACAGGCGCA
GACGCGCTCGCCGCCAAGATCCACCGCCTCCTCCTTATGACCCCGCGCGGAAGCATTCCG
GTGAACAGGCTCGTCCACCTCGCCCCCGACCTCGGCCTCGCCATGGACTTCCGCGCGACG
CTTTGCCCCCGCCACCCGGACCTCTTCAGACTCGTGAACACCTCCCGCGGCCATGCACTC
AAGCTCGCCGATCCCCCGCCAACGCCGCCTCCGCCGCCCCTCTCTCTTCGCCCCGCCGCG
ACGCCCGACCGCCTCATGGACAGGCCGCGGAGGTTTCCGCACCTCCCGCTCCGCCGCGGG
CTTAACCTCCGCCGCGCGCACAGGGACTACCTCCTGCGGTTCCATAGCCTTCCCAAGGTG
TCCCCGTTCGAGCAGCTGGATGAGGGCGCTAGCCTGGAGATGTTGGAGCGGCGGGCGTGT
GCCGTGGTGCGGGAGGTGCTGGCCATGACGGTGGAGAAGCGGACGCTCGTGGATCACCTC
ACGCACTTCAGGAAAGACTTTGGGTTGCCAAACAGGCTGCGCGCCATGCTGGTACGACAT
CCAGAGCTGTTCTATGTCAGTGTGAACGGGGTGCGACATTCAGTGTTCCTTGTGGAGGCG
TTTGGTGATGATGGGAGGCTCCTAGTGGAGGATGAGATGCTGGTTGGGAGGGATAGGCTA
GAGGAGCTTGTTCGGGAGGGAAAGCGGATGCGGCGTGCTCGGAAGAAAGGCCTTCTCACG
TTTGATGGTGACAGTGATGAGGATGAAGATGATGAGGCAGCAGAAGAGGAAGGTTCATTA
GAGGTGGATGATGAGTTTGGGGACTTGTTTGAGGATGGTATAATTGGGGAGGATTGGGAG
GAAGTAGGCGATGGAGGTAGAAGTGAGGCATATGAAGAGTACGATGCTGAATTGGGTGAG
ACAGAGGAGTTTTGGGTCAAGAAGGCTGTGGCTCAAGGACTGGTTGATGATGGTAATGAG
CAGGATGTTTGGTGA

Peptide Sequence

PEP ID

OQU90785
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:3317169:3320900:1 gene:SORBI_3001G044600 transcript:OQU90785 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVVVAPSSACSFLLAHPSGPARPRRPHPMNSTAKPLSHTLTIRCAATTAAGRPGPPPPKL
PGPPPLPPPKLVRCAALDRQAARASRLRFVRKLLTLLLSKPRHFLPLRVLNRCRRFLGLP
RRGRPLIPMVLRYPALFRLFQAHTSLPLSPSLSTLAVGLTPAAEALAADLAALRATSTGA
DALAAKIHRLLLMTPRGSIPVNRLVHLAPDLGLAMDFRATLCPRHPDLFRLVNTSRGHAL
KLADPPPTPPPPPLSLRPAATPDRLMDRPRRFPHLPLRRGLNLRRAHRDYLLRFHSLPKV
SPFEQLDEGASLEMLERRACAVVREVLAMTVEKRTLVDHLTHFRKDFGLPNRLRAMLVRH
PELFYVSVNGVRHSVFLVEAFGDDGRLLVEDEMLVGRDRLEELVREGKRMRRARKKGLLT
FDGDSDEDEDDEAAEEEGSLEVDDEFGDLFEDGIIGEDWEEVGDGGRSEAYEEYDAELGE
TEEFWVKKAVAQGLVDDGNEQDVW

Transcript Sequence

Transcript ID

OQU90785
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:3317169:3320900:1 gene:SORBI_3001G044600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTGGTGGTGGCGCCCTCCTCCGCATGCTCCTTCCTGCTCGCGCACCCGTCCGGCCCC
GCGCGCCCTCGCCGTCCCCACCCCATGAACTCGACCGCCAAACCCCTCTCCCATACCCTC
ACCATCCGCTGCGCCGCCACAACCGCGGCGGGGCGCCCGGGACCCCCACCGCCGAAGCTC
CCGGGACCCCCACCGCTGCCACCGCCGAAGCTGGTCCGCTGCGCTGCTCTCGACCGCCAG
GCGGCGCGCGCAAGCCGCCTCCGCTTCGTGCGCAAGCTCCTCACCCTCCTCCTCTCCAAG
CCACGCCATTTCCTCCCGCTCCGCGTGCTCAACCGCTGCCGCCGCTTCCTCGGCCTCCCG
CGCCGCGGCCGCCCGCTCATCCCCATGGTCCTCCGATACCCGGCCCTCTTCCGCCTCTTC
CAGGCCCATACCTCCCTCCCGCTCTCCCCGTCCCTCTCCACCCTCGCGGTCGGGCTCACT
CCCGCCGCCGAGGCGCTCGCCGCCGACCTTGCCGCGCTCCGCGCCACCAGCACAGGCGCA
GACGCGCTCGCCGCCAAGATCCACCGCCTCCTCCTTATGACCCCGCGCGGAAGCATTCCG
GTGAACAGGCTCGTCCACCTCGCCCCCGACCTCGGCCTCGCCATGGACTTCCGCGCGACG
CTTTGCCCCCGCCACCCGGACCTCTTCAGACTCGTGAACACCTCCCGCGGCCATGCACTC
AAGCTCGCCGATCCCCCGCCAACGCCGCCTCCGCCGCCCCTCTCTCTTCGCCCCGCCGCG
ACGCCCGACCGCCTCATGGACAGGCCGCGGAGGTTTCCGCACCTCCCGCTCCGCCGCGGG
CTTAACCTCCGCCGCGCGCACAGGGACTACCTCCTGCGGTTCCATAGCCTTCCCAAGGTG
TCCCCGTTCGAGCAGCTGGATGAGGGCGCTAGCCTGGAGATGTTGGAGCGGCGGGCGTGT
GCCGTGGTGCGGGAGGTGCTGGCCATGACGGTGGAGAAGCGGACGCTCGTGGATCACCTC
ACGCACTTCAGGAAAGACTTTGGGTTGCCAAACAGGCTGCGCGCCATGCTGGTACGACAT
CCAGAGCTGTTCTATGTCAGTGTGAACGGGGTGCGACATTCAGTGTTCCTTGTGGAGGCG
TTTGGTGATGATGGGAGGCTCCTAGTGGAGGATGAGATGCTGGTTGGGAGGGATAGGCTA
GAGGAGCTTGTTCGGGAGGGAAAGCGGATGCGGCGTGCTCGGAAGAAAGGCCTTCTCACG
TTTGATGGTGACAGTGATGAGGATGAAGATGATGAGGCAGCAGAAGAGGAAGGTTCATTA
GAGGTGGATGATGAGTTTGGGGACTTGTTTGAGGATGGTATAATTGGGGAGGATTGGGAG
GAAGTAGGCGATGGAGGTAGAAGTGAGGCATATGAAGAGTACGATGCTGAATTGGGTGAG
ACAGAGGAGTTTTGGGTCAAGAAGGCTGTGGCTCAAGGACTGGTTGATGATGGTAATGAG
CAGGATGTTTGGTGAGCGCATCAGCTTGTGAGACTTTGCTCAGGAAGTTAACGAAGATTG
AGAATTCCTCAAGTGTGCTTTCTCAGCAATGCACATAAACCAGTAAGCATCGGTACATAT
CCCGGTATCTTGGACCTCTTGGTCCCATTTGCCGCCTGTCTGTTGCTACTTGCAAGGTAT
GCATGTATACACTATTCGTTTGATTCTGGGTATGCACGCTTATTTTCTATATGCATACAC
TACATGTTGCTAATTAATAGGATTATATAGAGGGGGTATATGCAAAGGTTGAGAAGTTTT
GTTGCATAGCTTGGTTCATAATCTTAGGCCGCTGCTCTATATAAGTAGTTAGAATATGGA
TGCTTGATCTGCTGTTAAATAACAAATATGATATCTAAAAGCTCCCAAGTAACTTTATCA
TATTTGTGTGCTGCCTTGTATGCTTCTCATTGCGCAGACAATGATTTTGCTCTGCCAGCC
ACCCAGTCTGCCTTGATTGCATGGGTAGACACCTCTTGTTTATATCCAGGCTCTGGATAG
GCACTTCCTCATCTTGCTCCAGCAACCAAAAAGAAAAAGAAAAAAAAAAGAAAAGAAGAA
TACAAAATAAAAAATCACAAACGCTGAATCACATTTAATGTACGCTTATTAATCTTCCTA
GGGGCTAGTCAGTGTCCAAGGGCCTAGCGCGCTTTGGAACTTTGGAAAGACAAAGAGATG
AAGCGGCTCCGTTATCCTCTGTTACTTTTGTTATGGAGAGGAGCTAGATGGACAGTCGCG
ATGTCGAGGACATGCGTCCTCCTGGGTACTGTTTCTGCTTTGATGCTTATGTGCAACTTT
AAAGGTTTTCCCATGTTATATAGCATGAAAAGCCACTTTTGAACTCTAATCCTTTGATCA
ACATAGTTGGCTTCTGTAACCAAACATATCAGGCTAAATCAGTCTATAATTTATTCTTGC
AACTGCTACTATATCCCAAAATAATGCATGTTACAATTTTCAAATCACAGTACATAATGA
GCATTGCAATTGCAACGATCACAGGTGTATTGTGAACATTTTTTTTTTTTGCGATTGCAA
CTGTTCTTTTGGTTGTTACCTGAACACATTTGCATTGTAGTTTATTGTTGTGGAACCGTG
TTATAGTTTGTGTTACGTACTGCTATGTAACAATGATTTGTTTTTTTTTTCCCTGTTTGT
GGTACCATTGACTTCAGAGCTTGGATCTTGTTTGTATATCTAAGCACATTACTGCTCATT
TCAATTGAGTTTCATGGATTTTTGTCTTCATTATCTTATACTTGTGACGCACCCCTACTC
TATCTAAGCATCGTTTGAATAAAACTACTATTGCATGCTAAGCTCTAACACAGACGCTTA
TTTACTTTTTCACCTTAATCATCTCCTTAAGTGCCCTTGCATTGTACAGGTCCTAACGGT
TCGTTTATACCCCATCCCACTTCCTCCAGCAGTCCAACAGAGATTCAGCCATGGCGGACG
CCGACCTTGGATGAACTGCCGGTGATTCACTGAGGGGATGGATGCTCTCAGGATTCAAGT
TATGGAAAGCGCCGTACCTTTCCTTATGGGGTCCTCCGCCCCTGTGGAGCTCGTCGTGGC
TTGGGCAGGGCCGTGGAGGACTGGTGTAGGTTTGATCCAGAGCATGCATGGTCTTGGACT
GAGCGACGACAACCCAGAAGGCGGAGGAGGCCAGGATTGAGCGGCGACGTACAAGGCTAG
GGGAAGAAGATTGATTGGTGGTCGATTGCGAGGCAATGACGACTCCTTTCCTAGGCGGAG
TCCCCCACCGCGTGATGTTGACGCTCGCAATGAAGGAACGGCGGCGGCTGCCTCACGCGT
GACGTGTAAAGCTCTGTTCTCCATGCGCCGGATTCTCCACGGGCACAGATAGTGGTGTTT
TTGTTGAAGGCGTTAAAGTTTAACATGTGCTATAGTTTTTTTGTTTTATTTGGTAATTAG
TGTTCAATTATAGATTAATTAGGCTTAAAAGATTCGTTTCGTATATATATTCAAATATTA
AGACGGAAGTTAAAGTTTACCGATGTAAACGAAATAGGACCTTAGAGGGTGTTTGGTTGG
GGATGATCTTTGTTTAAATCCATTCTTTTTTGGATTTTGAGCCTGTAGCATTTTTGTTTT
TATTTAACAAACATTATTCAATCATGGAGTAACTAGGCTTAAAAGATTATTCCATGATTT
ACAGGTAAACTG