Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90748
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:2822265:2827550:-1 gene:SORBI_3001G038000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGGCATGGCTGCTCCGCGCGCACCGCTACCTCTTCCCCAGTTGCTGCTCCTCGTCGTC
GCCGCGCTCCTCGCCGCCGCTCCCCTCCTTCATAGGGCGGCCGGGGCGGAGGACTTCGAC
GTCCGGCGCCACCTCTCCACCGTCACCAGGTATGATGTGGCCAGAGAGTCCAGGGGTGTC
ATCTCCATGCCGTCAATCCCAGACGGGTGCCGTGTCGTTCACCTCAATCTAGTGGCAAGA
CATGGGACTCGTGCTCCTACCAAGAAGCGAATCAAGGAGCTGGATAGATTGGCAGTTCGA
CTGGAAGCCCTTATGAAAGAGGCAAACCATGGCCTTGATAGTGATTCTCTGAAGAAAATT
CCATCCTGGATTAAAGGCTGGGAATCACGTTGGAAGGGTAGGACTAAAGGTGGTGAGCTG
ATTAGTGAAGGGGAAGAGGAGCTGTACAATTTAGCTACAAGAGTGAGGGAGAGGTTTCAA
GATCTACTTGACGACGAATATCACCCTGATGTATATTCAATAAGAGCAACTCAGGTTCCT
CGAGCATCAGCTAGTGCCGTGGCATTTGGTTTGGGACTACTTTCTGGGAAAGGAAAGCTT
GGACAAGGGAAGAACCGTGCCTTTTCTGTTCTGAGTGAGAGTCGTGCAAGTGATATTTGT
CTGAGATTCTTTGACAGCTGTGAGACATACAAGGCATATAGGAAAAGGAAGGAGCCTGAT
GTAGAGAAGCAAAAGGAACCAATTCTAGAGCATGTCACAGCTGCTCTTGCCAATCGTTAT
CACCTAAAATTTACAACTCAGGATGTTTCTTCCCTCTGGTTTCTTTGTAAGCAGGAAGCA
TCTTTGTTGAATATAACCAATCAAGCTTGTGGGCTTTTCAATGAAGCCGAGGTTCGTTTT
CTAGAGTGGACAGATGATTTGGAGGGTTTTGTCCTAAAAGGCTATGGTGAGTCAATTAAC
TACAGGATGGGACTGCCATTGCTCAAGGATGTTGTCCAGTCAATGGAAGAAGCAATAATA
GCTAGAGAAGAAAACCACCCTGATGGTACGTATGAAAAGGCAAGGCTTCGATTTGCACAT
GCAGAAACTGTTGTTCCTTTTAGCTGTCTTCTCGGTCTTTTTCTTGAAGGTCCAGACTTT
GAGAAGATACAGAGGGAGGAAGCGTTGGACCTACCCCCTTTGCCGCCACAGGGAAGAAAC
TGGAAGGGCAGTGTTGTTGCGCCTTTTGCTGGTAACAACATGCTGGCTTTATACCAATGC
CCAAGCAAAATTTCGGATGGCAGCGCAACCTCTGGAGGCCAAAGTAACTCATACTTCATT
CAAGTTCTACACAACGAAGCCCCAATTTCAATGCCTGGGTGCGGCAACAAAGATTTCTGT
CCATTCGAGGAGTTCAAGGAGAAGATTGTGAAACCGCACCTGAAGCACGACTACAACATG
ATATGCAAGATCAAATCCCCGGCGGCAAGCGAGGAGCCCGCCTCGTTCCCCTCCAGAGTG
TCCAGTTTCTTCGTAGGACTCTTCTCGCAGAGAGGGTACCACGCCGTGGGCGCTGAAGGC
GTCAAGACCGAGCTGTAG

Peptide Sequence

PEP ID

OQU90748
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:2822265:2827550:-1 gene:SORBI_3001G038000 transcript:OQU90748 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MGMAAPRAPLPLPQLLLLVVAALLAAAPLLHRAAGAEDFDVRRHLSTVTRYDVARESRGV
ISMPSIPDGCRVVHLNLVARHGTRAPTKKRIKELDRLAVRLEALMKEANHGLDSDSLKKI
PSWIKGWESRWKGRTKGGELISEGEEELYNLATRVRERFQDLLDDEYHPDVYSIRATQVP
RASASAVAFGLGLLSGKGKLGQGKNRAFSVLSESRASDICLRFFDSCETYKAYRKRKEPD
VEKQKEPILEHVTAALANRYHLKFTTQDVSSLWFLCKQEASLLNITNQACGLFNEAEVRF
LEWTDDLEGFVLKGYGESINYRMGLPLLKDVVQSMEEAIIAREENHPDGTYEKARLRFAH
AETVVPFSCLLGLFLEGPDFEKIQREEALDLPPLPPQGRNWKGSVVAPFAGNNMLALYQC
PSKISDGSATSGGQSNSYFIQVLHNEAPISMPGCGNKDFCPFEEFKEKIVKPHLKHDYNM
ICKIKSPAASEEPASFPSRVSSFFVGLFSQRGYHAVGAEGVKTEL

Transcript Sequence

Transcript ID

OQU90748
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:2822265:2827550:-1 gene:SORBI_3001G038000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCTTTCTTCTCACCTGGAAAGGGAAGGGGAGCGCCGAGTCGAGAAGGCAAATCGTATTCG
CCATGGGCATGGCTGCTCCGCGCGCACCGCTACCTCTTCCCCAGTTGCTGCTCCTCGTCG
TCGCCGCGCTCCTCGCCGCCGCTCCCCTCCTTCATAGGGCGGCCGGGGCGGAGGACTTCG
ACGTCCGGCGCCACCTCTCCACCGTCACCAGGTATGATGTGGCCAGAGAGTCCAGGGGTG
TCATCTCCATGCCGTCAATCCCAGACGGGTGCCGTGTCGTTCACCTCAATCTAGTGGCAA
GACATGGGACTCGTGCTCCTACCAAGAAGCGAATCAAGGAGCTGGATAGATTGGCAGTTC
GACTGGAAGCCCTTATGAAAGAGGCAAACCATGGCCTTGATAGTGATTCTCTGAAGAAAA
TTCCATCCTGGATTAAAGGCTGGGAATCACGTTGGAAGGGTAGGACTAAAGGTGGTGAGC
TGATTAGTGAAGGGGAAGAGGAGCTGTACAATTTAGCTACAAGAGTGAGGGAGAGGTTTC
AAGATCTACTTGACGACGAATATCACCCTGATGTATATTCAATAAGAGCAACTCAGGTTC
CTCGAGCATCAGCTAGTGCCGTGGCATTTGGTTTGGGACTACTTTCTGGGAAAGGAAAGC
TTGGACAAGGGAAGAACCGTGCCTTTTCTGTTCTGAGTGAGAGTCGTGCAAGTGATATTT
GTCTGAGATTCTTTGACAGCTGTGAGACATACAAGGCATATAGGAAAAGGAAGGAGCCTG
ATGTAGAGAAGCAAAAGGAACCAATTCTAGAGCATGTCACAGCTGCTCTTGCCAATCGTT
ATCACCTAAAATTTACAACTCAGGATGTTTCTTCCCTCTGGTTTCTTTGTAAGCAGGAAG
CATCTTTGTTGAATATAACCAATCAAGCTTGTGGGCTTTTCAATGAAGCCGAGGTTCGTT
TTCTAGAGTGGACAGATGATTTGGAGGGTTTTGTCCTAAAAGGCTATGGTGAGTCAATTA
ACTACAGGATGGGACTGCCATTGCTCAAGGATGTTGTCCAGTCAATGGAAGAAGCAATAA
TAGCTAGAGAAGAAAACCACCCTGATGGTACGTATGAAAAGGCAAGGCTTCGATTTGCAC
ATGCAGAAACTGTTGTTCCTTTTAGCTGTCTTCTCGGTCTTTTTCTTGAAGGTCCAGACT
TTGAGAAGATACAGAGGGAGGAAGCGTTGGACCTACCCCCTTTGCCGCCACAGGGAAGAA
ACTGGAAGGGCAGTGTTGTTGCGCCTTTTGCTGGTAACAACATGCTGGCTTTATACCAAT
GCCCAAGCAAAATTTCGGATGGCAGCGCAACCTCTGGAGGCCAAAGTAACTCATACTTCA
TTCAAGTTCTACACAACGAAGCCCCAATTTCAATGCCTGGGTGCGGCAACAAAGATTTCT
GTCCATTCGAGGAGTTCAAGGAGAAGATTGTGAAACCGCACCTGAAGCACGACTACAACA
TGATATGCAAGATCAAATCCCCGGCGGCAAGCGAGGAGCCCGCCTCGTTCCCCTCCAGAG
TGTCCAGTTTCTTCGTAGGACTCTTCTCGCAGAGAGGGTACCACGCCGTGGGCGCTGAAG
GCGTCAAGACCGAGCTGTAGGTCACACTAGCATAGGTGCATAGCAACCATCTGCCACGGT
GCCGCCTCTCACCGTCTGCGAGCAGCGAGCACGAGCAAGGAACCAGACTAACCGATGCAC
TGACCTGCGGTGTATTTGTAGTTCTGTACGGGACGAGGAGGCGCCAGTTCAATTTCTCCA
GGGCCAGACGCCTCATAAATTCTGTTTCACTTCGAACTCCCTTCCGCGCAGAAAGAAATG
CATGCCGTCGAGGCACGCGTGGCTTTTGCCGTTGTGGTCATGTCACTGTAGTTTTAATGA
CAGCTGTGGACTCTACTGTGCCATTTACTATAGTACTCTGCTACAAGGCTTTGTTTAATT
CTAATTTTTTTATAAAACAGACGCCATAATATTTTTGTTTGTATTTAACAAATATTTTCT
AATTATAGAATAATTAGACTT