Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90728
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:2668949:2672830:1 gene:SORBI_3001G035500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCAACCTGTCGCAAGGGGAGCTCAAGTAGATAAGACCTTCAATGATAAAGGATTGTGT
CATGCTAGCAGAACTGTCTCAGGAATGCCCATTCGACCTCAATATTATCTCAGCAGTCCC
AACAACAATTTCAAGAATCCTCCGACTGTAAAGAGTTGTAGTGAGATGAGTGATTTCAGT
TATCAACTGGTAAGATGTGCTAAACGGTCAGCTTCACCAAAGATGGGTTTAACCAGCACA
AACTGCTCCCTTTCTGAGAAAATGTCTCTGCTACGTCAACCACGGCATGGTGATAATCAT
CAGAACCAAAACCGTATCAGTGCTTTGAATCGAAGACACAAAATCGTGAATCCTAGGGGA
GCAACTGACCTGCTAAATAAAGATAAGGTTCATGAACAACTTAATTCCTCATTGGAAAGA
CATTCACAGGCTCTGTTAAATAATGCATTGATTCGAGAAAAGCAACTGTGCTGTTCAGAT
ATGGTCAATCAAAAAGCACCCGAACAGCTGTGGAGCTCCACTTACAGTGAATCTGAGAAG
ATATTATGCTTTTCCTCCAGTGACAGCAATGATGATCTGCAAGTATCGTCTTCAAGTGAC
ACTAGTGATAGCTCCAACTTATCATCTCTGGGTGTAATAGCTAGTGATCAATGGAATATG
ACCTTCAAGAAGGGATACTACCCTCATGCTGCATGCCTAGACTCTACATCTGTCATCTAC
GCTAAAGAGATAGGTCAGGATAGCCCAATATCTGTTCTTCAACCTCTATCTGAAGATTGC
TCTGATACTGAAAACATCAGGCGAGAGCCTGCAGATCCATACGATCTCCAACTGAGACTT
GAACTTGGCACATTTGCACCAACAGAGACTGCTGCAGAGGTAAGTAGCATTGGCAGAACT
AGTGACTGTTTATCCTCTGAAGTGGAGCTGAGTGATGAGAAACCCATACAGCTGGTTGAA
GATATTCTTGAAGGATTTGAAGATGATGAGGAAAGGGAATTCTCTTACTTGCTGGATATG
CTGATTGCTTCTGGAATTCATGGAACTTCCGAGGATCAAATGTACAAGGTGTGTCAGTCT
CTCGACTACCCTGCTGGTGATGATGTATTTGAGAAGCTGGAAAAGAAGTACATCAAGGTT
GTACAATGGTCAAGATCAGATAGGAAGCTTTTATTCGATATGGTCAACACAATACTATCA
CAAATCCTTGCTCCATGCTTGAACATGCAACCTTGGGTCAATACCACTAGGAACTTGGCT
CCACTTTGGGGATCAGAGGGTCTATTGGAGAAACTCTTGAAGGTGCTAGTTCAGAGACGG
GAACAACTTGCACCCAGTGACACTAAGCCAGAGAAGAAAGGATTTGATATGAAGTGGCCA
GATATAGCAGACTGTATCGACAGGGCAGGAAGGGACATTGAGAGAATGATAAAAGATGAT
CTATTGGAAGAGCTGGTCCTTGAGCTACTGTTCAGTTAG

Peptide Sequence

PEP ID

OQU90728
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:2668949:2672830:1 gene:SORBI_3001G035500 transcript:OQU90728 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MQPVARGAQVDKTFNDKGLCHASRTVSGMPIRPQYYLSSPNNNFKNPPTVKSCSEMSDFS
YQLVRCAKRSASPKMGLTSTNCSLSEKMSLLRQPRHGDNHQNQNRISALNRRHKIVNPRG
ATDLLNKDKVHEQLNSSLERHSQALLNNALIREKQLCCSDMVNQKAPEQLWSSTYSESEK
ILCFSSSDSNDDLQVSSSSDTSDSSNLSSLGVIASDQWNMTFKKGYYPHAACLDSTSVIY
AKEIGQDSPISVLQPLSEDCSDTENIRREPADPYDLQLRLELGTFAPTETAAEVSSIGRT
SDCLSSEVELSDEKPIQLVEDILEGFEDDEEREFSYLLDMLIASGIHGTSEDQMYKVCQS
LDYPAGDDVFEKLEKKYIKVVQWSRSDRKLLFDMVNTILSQILAPCLNMQPWVNTTRNLA
PLWGSEGLLEKLLKVLVQRREQLAPSDTKPEKKGFDMKWPDIADCIDRAGRDIERMIKDD
LLEELVLELLFS

Transcript Sequence

Transcript ID

OQU90728
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:2668949:2672830:1 gene:SORBI_3001G035500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CATGTCCACACGAGTTAGTTTAGCTAGCCGCCTAACCACGGATCACCACAATAAGCACCG
CCGCGTCGGCTGCTTTGGCCAGTCAAACCACACGGATCAGGATCACCAATTCACGCAGCA
GCCAAGACGAGGGTCTCCGGTTTCGGCTCTCCGTAACGAAAGACAAAAGGTTTCATAGGC
AAGTCCGCAAGTGCGTGCGTGCGGTTACACGGGGGCAAGGGGGCGAGTCCACTGTGGGCA
GGGGGCCACGGGGCCTGAAAAGGCAGGGGCGGGGCGCCACCCAACCGCTGCCGCGGGAGC
GCCGCCACCGAACGCGCCCCGCCGGCCTCCCTTCCTCCCTCGCGGCCCGTCCCGCCCCGT
CCGCCCCGGCGCGCCCCAGGCGTCGCGACGCTCGGGCCGAGAATCCAGCCCTTCCTATCT
CCTCGCGGCGCTCACTCCTCAAATAGGCCGCGCGGGATCACGGTCCGCGCGAGCGGAGCC
CCGGGCAGCAGCGTCGACGGAGGTTCGTCGGTCGGGTTGACTTGGGGGCGCGGATGGGCG
GGACCAGCGCGAGAGGCCGGCGGAGGTGGGCGCGGCGGTCCTGCCGGACGGGAGGAGGAG
CCGGTGGGGTTGTCAGGCGGACGGTCGCGGCGCCGGCGACCACTGCTCCGCGGGTAACCG
AAGGTAACGGCCGGCTCTCCCCGAAACGAATCTCTGCGGCTTTTGCCTGTGTCGGTGATT
CGTTTCAAACGGCTGGGGAATCGCGCGCGATTGTTTCCGGTTGATTTGGGTTGCTCCTGC
TTGCTTCCGGCTTCCTCTTCGCCGCGTAGTGGGTATTGCTTGCTTCTTTGCTTAATTTGC
TTGCAGTGGTATGGCGTGTCCTATGTGCGGAAGCGAGGAGGTTACCTAATTTGCTTGCAT
CGTTGGGTTACTTGTTTGTTTGTCTGTTGCCCCTTGTCGAGAAAACGTTAATTAGGGAAC
ATCATGCTAGAGTCAGTGCGACGAAGCTTCTTGCCATTTATTTTCCACACACATGTTTTA
TTGTCTATATCCGAGAAATACTAACAGGGCAAAACATCCCGGGAGAAAAAATAAATAAAA
TCGGATAACACAGTTTGACTGAATAATTGGTCGTACCATGTGATTCATGAATTAATTTAT
TTCCTTTAGGGACAAGAACTGCAACGGTGTATTTTTGGGTCTGTTTTTAATTATATTATT
ATTATGGCGGCCAGTGCATCATGTCTGAATGGTAATCGTGCAATTTTTTTAAGGTAAAAG
TCTTAATGATTTGTAGTTGACCCGTTCTTGCTCTACTTCTGGCTCGTACTCAGGGTTTGC
TCATGTGGACAAGCAACGACGTGTTCATGGAGTATTATCTGATTTCAGATGCAACAGTGG
ATCAACAGATCATGTAAGCTGTTCAAATCCTCACTATTGATTTATCTATATTTCTATTAG
TCCTTGAATTTGTAATTGTTTTCCTGCATATTCTTCTACAACTCAAAGCTTTACTGCACT
AAATGTTTGTTTTTTTTTGGTTTCACAGTTCTTACAAAATTATCCTTTTGATACAGCTTT
CTTTGGATATCAAGGATTTCAAGCATAAGAGCTCCCACAGATCGTCTGTTAGATGTCTTC
CTAGTGCACAGAGAAATGAAACAGAAATCAGTCACATGCAACCTGTCGCAAGGGGAGCTC
AAGTAGATAAGACCTTCAATGATAAAGGATTGTGTCATGCTAGCAGAACTGTCTCAGGAA
TGCCCATTCGACCTCAATATTATCTCAGCAGTCCCAACAACAATTTCAAGAATCCTCCGA
CTGTAAAGAGTTGTAGTGAGATGAGTGATTTCAGTTATCAACTGGTAAGATGTGCTAAAC
GGTCAGCTTCACCAAAGATGGGTTTAACCAGCACAAACTGCTCCCTTTCTGAGAAAATGT
CTCTGCTACGTCAACCACGGCATGGTGATAATCATCAGAACCAAAACCGTATCAGTGCTT
TGAATCGAAGACACAAAATCGTGAATCCTAGGGGAGCAACTGACCTGCTAAATAAAGATA
AGGTTCATGAACAACTTAATTCCTCATTGGAAAGACATTCACAGGCTCTGTTAAATAATG
CATTGATTCGAGAAAAGCAACTGTGCTGTTCAGATATGGTCAATCAAAAAGCACCCGAAC
AGCTGTGGAGCTCCACTTACAGTGAATCTGAGAAGATATTATGCTTTTCCTCCAGTGACA
GCAATGATGATCTGCAAGTATCGTCTTCAAGTGACACTAGTGATAGCTCCAACTTATCAT
CTCTGGGTGTAATAGCTAGTGATCAATGGAATATGACCTTCAAGAAGGGATACTACCCTC
ATGCTGCATGCCTAGACTCTACATCTGTCATCTACGCTAAAGAGATAGGTCAGGATAGCC
CAATATCTGTTCTTCAACCTCTATCTGAAGATTGCTCTGATACTGAAAACATCAGGCGAG
AGCCTGCAGATCCATACGATCTCCAACTGAGACTTGAACTTGGCACATTTGCACCAACAG
AGACTGCTGCAGAGGTAAGTAGCATTGGCAGAACTAGTGACTGTTTATCCTCTGAAGTGG
AGCTGAGTGATGAGAAACCCATACAGCTGGTTGAAGATATTCTTGAAGGATTTGAAGATG
ATGAGGAAAGGGAATTCTCTTACTTGCTGGATATGCTGATTGCTTCTGGAATTCATGGAA
CTTCCGAGGATCAAATGTACAAGGTGTGTCAGTCTCTCGACTACCCTGCTGGTGATGATG
TATTTGAGAAGCTGGAAAAGAAGTACATCAAGGTTGTACAATGGTCAAGATCAGATAGGA
AGCTTTTATTCGATATGGTCAACACAATACTATCACAAATCCTTGCTCCATGCTTGAACA
TGCAACCTTGGGTCAATACCACTAGGAACTTGGCTCCACTTTGGGGATCAGAGGGTCTAT
TGGAGAAACTCTTGAAGGTGCTAGTTCAGAGACGGGAACAACTTGCACCCAGTGACACTA
AGCCAGAGAAGAAAGGATTTGATATGAAGTGGCCAGATATAGCAGACTGTATCGACAGGG
CAGGAAGGGACATTGAGAGAATGATAAAAGATGATCTATTGGAAGAGCTGGTCCTTGAGC
TACTGTTCAGTTAGGTTTCCACGGCCGGAGTAGGTTTTATTATAGCAGTACAGATACCTT
GTTTTTTCTATATCTAGTTTTTTTAGTCAGTTGTAATTGTTCCTTTGGTCCCTACCTTCA
ATCAGTGTTATTTTTTTTCTCTCTTTGTTATTAAAGCAGTGGTTGACAGGTTTTTTTTGG
TCTAGTCCTTGTGCTTCTGGTGGTATTAGAGACGTGAGTTCTATTGGATTAGGAGATCTC
TGTAGGAAAATTCTTTTTACCTCGAAAATCAAGTACTCTTGGAAGTGAGGTTTGTAAGAA
CAGAAGTCTTTTCTGTCAAGTTTTGTCGGCTGTGAGAGTTTCAAGTCTGTAAACGAGGGC
AAATTATAGTCCACAGACATTTGTATTGTATTGTTCTTGAAAGGAAGAATAAGCG