Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90684
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:2095431:2098430:1 gene:SORBI_3001G026800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTTGAGATCCAGTGGTCCACCGTATCCAGCATATACTGCAAGGACATGCCGCCGAAT
GTATATCGGCCTCACAGTGTCACAATAACTGAATTTGGTGCCATTGGGGATGGTGTGACC
CTCAATACAAAGGCATTCCAGAATGCAATCTTCTATCTCAATTCATTCGCGGACAAGGGT
GGTGCGCAGCTCTTCGTGCCTGCTGGAAGGTGGCTGACAGGGAGTTTTAATCTTATCAGC
CATCTCACTTTATCACTGGACAAGGATGCGGTAATAATTGGATCTCCGGATTCATCTCAT
TGGCCAGTTATTGATCCTCTTCCATCCTATGGACGAGGTAGAGAGCTTCCTGGAAAAAGG
CATCAGAGTCTGATTTTTGGATTAAATCTGACGGATGTAATTATAACTGGTGCTAATGGT
TCCATTGATGGTCAAGGAGCTATTTGGTGGGGCTGGTTCCGCAACCACACATTGAATTAT
ACTAGACCACATCTTGTTGAGTTGATGTATTCTACCAATGTTGTCATATCTAATCTAACC
TTCAAGAACTCGCCGTTTTGGAATATCCACCCTGTATACTGCAGCCAAGTGCTTGTCCAG
CATGTCACAATCCTTGCGCCTTTGAATTCACCAAACACAGATGGTGTTAGTCCAGACTCC
TCCACGAATGTGTGCATCAATCATTGCTATGTAAGAAATGGTGACGATGTTATTGTCATT
AAAAGTGGCTGGGATGAGTACGGCATTTCATTTGCTCAACCAAGCTCCAATATCAGCATA
AGCGACATCACAGGGGAGACAAGGGGTGGTGCAGGGATTGCCTTTGGAAGTGAGATGTCA
GGTGGCATATCAGAAGTCCGGGCTGTGGGCCTCCGCATTGTCAACTCCCTTCATGGGATC
AGAATCAAGACAGCCCCAGGGCGTGGAGGGTACGTGAAGAATGTGTACATAGCCGATGTG
AGCATGGACAATGTTTCAATGGCCATCAGGATCACTGGAAACTATGGTGAACATCCTGAT
GACAAATATGACAGGACTGCTCTCCCTGTGATAAGCAATATTACAATCAAGGATGTGGTT
GGCGTTAACATTGGCGTTGCTGGTATATTGGAAGGCATTCAGGGGGACAATTTCAGCAAC
ATTTGTCTGTCCAATGTTTCCCTCAGTGTACAATCTGCACATCCATGGAATTGTTCACTT
ATTGAAGGATATTCTAACTCAGTGATCCCAGAATCATGCGAACAGCTCAAAAGCAATTGT
AGACAGACACCCATTTGCTACGATGGAAGCGGTTCTTCAGCAATGCATGTGCAGCAACCA
AGACATACATCGAGCACCAGCCGGTTGCTAAATCCTTTACTGGAGTTGGCTTCATTTTAG

Peptide Sequence

PEP ID

OQU90684
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:2095431:2098430:1 gene:SORBI_3001G026800 transcript:OQU90684 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVEIQWSTVSSIYCKDMPPNVYRPHSVTITEFGAIGDGVTLNTKAFQNAIFYLNSFADKG
GAQLFVPAGRWLTGSFNLISHLTLSLDKDAVIIGSPDSSHWPVIDPLPSYGRGRELPGKR
HQSLIFGLNLTDVIITGANGSIDGQGAIWWGWFRNHTLNYTRPHLVELMYSTNVVISNLT
FKNSPFWNIHPVYCSQVLVQHVTILAPLNSPNTDGVSPDSSTNVCINHCYVRNGDDVIVI
KSGWDEYGISFAQPSSNISISDITGETRGGAGIAFGSEMSGGISEVRAVGLRIVNSLHGI
RIKTAPGRGGYVKNVYIADVSMDNVSMAIRITGNYGEHPDDKYDRTALPVISNITIKDVV
GVNIGVAGILEGIQGDNFSNICLSNVSLSVQSAHPWNCSLIEGYSNSVIPESCEQLKSNC
RQTPICYDGSGSSAMHVQQPRHTSSTSRLLNPLLELASF

Transcript Sequence

Transcript ID

OQU90684
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:2095431:2098430:1 gene:SORBI_3001G026800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AATAGAAGAGAAAACTAAATGAGTTGGCCATCTTCAGCTTCCTTGCCGTGTTCAGATGCT
ATAAAACCACCCCGATGCAGATTTGAGTGAAACTTTGTTTTCAGATGGGTATAATTCTGT
TCAATTTTATTGTTCTATGTGTTCCTCGGATGAAAAGTTCTTCATGTTACATGTTATGTA
GGTGACGCAAATTATTAGCACAGGTATATGTGATTGTTACTGAATCTCCCTCTCTTTTTT
CCCTTTGGAATTTGTGCCAGTTGTTTCAAGTCCTTTTGGTTTTCATAACCATGGTTGAGA
TCCAGTGGTCCACCGTATCCAGCATATACTGCAAGGACATGCCGCCGAATGTATATCGGC
CTCACAGTGTCACAATAACTGAATTTGGTGCCATTGGGGATGGTGTGACCCTCAATACAA
AGGCATTCCAGAATGCAATCTTCTATCTCAATTCATTCGCGGACAAGGGTGGTGCGCAGC
TCTTCGTGCCTGCTGGAAGGTGGCTGACAGGGAGTTTTAATCTTATCAGCCATCTCACTT
TATCACTGGACAAGGATGCGGTAATAATTGGATCTCCGGATTCATCTCATTGGCCAGTTA
TTGATCCTCTTCCATCCTATGGACGAGGTAGAGAGCTTCCTGGAAAAAGGCATCAGAGTC
TGATTTTTGGATTAAATCTGACGGATGTAATTATAACTGGTGCTAATGGTTCCATTGATG
GTCAAGGAGCTATTTGGTGGGGCTGGTTCCGCAACCACACATTGAATTATACTAGACCAC
ATCTTGTTGAGTTGATGTATTCTACCAATGTTGTCATATCTAATCTAACCTTCAAGAACT
CGCCGTTTTGGAATATCCACCCTGTATACTGCAGCCAAGTGCTTGTCCAGCATGTCACAA
TCCTTGCGCCTTTGAATTCACCAAACACAGATGGTGTTAGTCCAGACTCCTCCACGAATG
TGTGCATCAATCATTGCTATGTAAGAAATGGTGACGATGTTATTGTCATTAAAAGTGGCT
GGGATGAGTACGGCATTTCATTTGCTCAACCAAGCTCCAATATCAGCATAAGCGACATCA
CAGGGGAGACAAGGGGTGGTGCAGGGATTGCCTTTGGAAGTGAGATGTCAGGTGGCATAT
CAGAAGTCCGGGCTGTGGGCCTCCGCATTGTCAACTCCCTTCATGGGATCAGAATCAAGA
CAGCCCCAGGGCGTGGAGGGTACGTGAAGAATGTGTACATAGCCGATGTGAGCATGGACA
ATGTTTCAATGGCCATCAGGATCACTGGAAACTATGGTGAACATCCTGATGACAAATATG
ACAGGACTGCTCTCCCTGTGATAAGCAATATTACAATCAAGGATGTGGTTGGCGTTAACA
TTGGCGTTGCTGGTATATTGGAAGGCATTCAGGGGGACAATTTCAGCAACATTTGTCTGT
CCAATGTTTCCCTCAGTGTACAATCTGCACATCCATGGAATTGTTCACTTATTGAAGGAT
ATTCTAACTCAGTGATCCCAGAATCATGCGAACAGCTCAAAAGCAATTGTAGACAGACAC
CCATTTGCTACGATGGAAGCGGTTCTTCAGCAATGCATGTGCAGCAACCAAGACATACAT
CGAGCACCAGCCGGTTGCTAAATCCTTTACTGGAGTTGGCTTCATTTTAGTGTAGGTAGA
GCTGTGCTTGTTATTATTGCTGCAAAGGGGCTTGCTTCACGGAATGACCCCTATTAGTCA
TGTATATCTGATTCTTGCAATTATTTGTGCTTAGAGTGCCGCTTGCTTCATGTATATAGC
TGTTGAGATGACTATTGATGTATCTTGCCTGTTTTGTTCCCATTTTTGATATGTGAATGC
AATCTGCATAACTTATGGTTTTG