Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90661
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:1704442:1711260:-1 gene:SORBI_3001G020600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTAGATGGTGACTTCAAGAAGTTTGAAGGAAAATGGTCCATAAGATCTGGTCCAAGG
TCCTCTAGTGCAGTTTTGCTGTATGAAGTTAATGTGATACCAAGATTTAACTTCCCGGCT
ATATTTCTTGAAAAGATTATAAGGTCAGATCTTCCTGTAAATCTTGGTGCCTTGGCTTGT
AGAGCTGAAAAGATTTATCTGGAAAATCAAAGTTGTGGTTCGAGAAAATTCTCTGTTGAG
GACTTGAAGCCATCATCTACTTCTTCTCAGCTTGATAACTTCCGTAGTAGGACAGTTGAT
ACTTCTTCTAGTAAATTTAAAGAAGCACCTCCCACTTCTGGTGTTAACAGTGTGCTTCCA
TCACCTGCTTCTGAATTGATTAGCAAATGGGGTGTATATGGAAATGTATGCAGAATTGAT
AGGCCTTGCGTGGTAGATGAGATCCATCTTCGAAGATTTGATGGCATGTTGGAACATGAG
GGGGCTCATAGGTGTGTTTTTGCTAGTATCACTGTGAAAGCACCAGTTCGGGAGGTATGG
AATGTTCTCACAGCATATGAGAATTTGCCCGAATTCGTACCAAACCTGGCTATCAGTAGG
ATTGTTCTTCGTGATAATAACAAGGTCCGCATAATGCAGGAGGGTTGCAAAGGCCTGCTG
TATATGGTCCTTCATGCCCGTGTTGTTATGGATCTTCGTGAAAAATTTGAGCAAGAGATC
AGGTTTGAACAAGTTGAGGGTGATTTTTACTCGTTTAAAGGGAAATGGCGCTTAGAACAA
CTTGGGGATCAGCACACCCTGTTGAAGTACATGGTTGAGACTAAGATGCATAGGGACACC
TTTCTCTCTGAGTCTATCCTTGAAGAGGTCATATATGAAGATCTTCCATCAAACTTGTGT
GCAATCCGTGATTATATTGAAAAGGCTGGAGCCAAGGGTAGCAACTCCACAGCTCATTCT
GATGTGTCCATAGACCCAGATGCTTATCATGCTGAAAGCAGGCAATCTGAGCAAGCATCT
GTGTCTTGCTCATCCAGTACCATGAAGCAGAGACCAAAAGTCCCAGGGTTGCAAAAGGAC
ATTGAGGTCCTAAAATCAGAGCTTGAGAATTTCATTGCAGAATATGGTCAGTATGGTTTC
ATGCCTAAGAGAAAGCATCTCCGGTCTCATGGAAGGGTGGATATCGAGAAGGCAATAACA
CGAATGGGTGGGTTCCGGAAGATTGCCAGCATAATGAACCTTTCTCTTTCTTACAAAAAT
CGAAAACCAAGAGGCTATTGGGATAATCTGGAGAACTTGCAAGAAGAGATCAGCCGGTTC
CAGAAAAGTTGGGGGATGGATCCTTCTTATATGCCAAGTAGAAAATCTTTTGAGAGGGCA
GGTCGTTACGACATTGCTCGGGCATTGGAAAAATGGGGTGGGGTGCAGGAGGTTTCACGC
CTTCTCTCTCTTAAACTAAGACGTCCTAGAAGGCAAGGCGACTTGGATGACGAGAGCCGG
TCTGAATCCCCATCTGAGATGACAAAGAAGCACGGGGTGAAACCTGATAAAGGCAATGTT
TCCCCAGATGCCCAGAAATGGCTCCTGAAGCTGAAGGATTTGGATGTCAACTGGGTGGAA
TACTAG

Peptide Sequence

PEP ID

OQU90661
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:1704442:1711260:-1 gene:SORBI_3001G020600 transcript:OQU90661 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVDGDFKKFEGKWSIRSGPRSSSAVLLYEVNVIPRFNFPAIFLEKIIRSDLPVNLGALAC
RAEKIYLENQSCGSRKFSVEDLKPSSTSSQLDNFRSRTVDTSSSKFKEAPPTSGVNSVLP
SPASELISKWGVYGNVCRIDRPCVVDEIHLRRFDGMLEHEGAHRCVFASITVKAPVREVW
NVLTAYENLPEFVPNLAISRIVLRDNNKVRIMQEGCKGLLYMVLHARVVMDLREKFEQEI
RFEQVEGDFYSFKGKWRLEQLGDQHTLLKYMVETKMHRDTFLSESILEEVIYEDLPSNLC
AIRDYIEKAGAKGSNSTAHSDVSIDPDAYHAESRQSEQASVSCSSSTMKQRPKVPGLQKD
IEVLKSELENFIAEYGQYGFMPKRKHLRSHGRVDIEKAITRMGGFRKIASIMNLSLSYKN
RKPRGYWDNLENLQEEISRFQKSWGMDPSYMPSRKSFERAGRYDIARALEKWGGVQEVSR
LLSLKLRRPRRQGDLDDESRSESPSEMTKKHGVKPDKGNVSPDAQKWLLKLKDLDVNWVE
Y

Transcript Sequence

Transcript ID

OQU90661
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:1704442:1711260:-1 gene:SORBI_3001G020600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCATCAAGCCCGCATTCTGAAGGTGGGGTGATTTTGTTCGTGCCTGCTTGCAGTGGGACG
ATTCCGTGCCCGCATGAAGGGCGGATATGGCTGGAGCAGAGAGGCCTGCAGCAAGCGTTG
TACTGGCACATTGAGGCGCGTGTCGTGTTGGATCTCCAGGAAATCCATGACTCCGTACGT
GCTGTCGCAGATTGACTTCCATTATAACTGCTAAATTGCAATGGAACAGTTTTGGAGTAT
CCAACATTTGACATCACCGACAAGGCGACAATGTTATGTCATTATGTGAAATGCCACTGA
AAAGTACTAGTGGATGATCAGTTGGCCAGTCCACGAGAGTGTGAATGCAACATTTATGTT
TTTGCAGCATGTGTTGTTCTTCTTGCTGTGGAGCTACGCTATTGTGTTTCTCTCTGATAT
ATTTCTTAGTTGTATGAGTTAGATTTAGCAAATCTGAAAAACGATGATGGATCTCCTCCA
TTTTCTATTCTATATTAAGTTATATTGCCTTACTTGATTATTCGTTCATGATTATGCTTT
CAGATTAATGGGCGAGAACTCCATTTCTCGATGGTAGATGGTGACTTCAAGAAGTTTGAA
GGAAAATGGTCCATAAGATCTGGTCCAAGGTCCTCTAGTGCAGTTTTGCTGTATGAAGTT
AATGTGATACCAAGATTTAACTTCCCGGCTATATTTCTTGAAAAGATTATAAGGTCAGAT
CTTCCTGTAAATCTTGGTGCCTTGGCTTGTAGAGCTGAAAAGATTTATCTGGAAAATCAA
AGTTGTGGTTCGAGAAAATTCTCTGTTGAGGACTTGAAGCCATCATCTACTTCTTCTCAG
CTTGATAACTTCCGTAGTAGGACAGTTGATACTTCTTCTAGTAAATTTAAAGAAGCACCT
CCCACTTCTGGTGTTAACAGTGTGCTTCCATCACCTGCTTCTGAATTGATTAGCAAATGG
GGTGTATATGGAAATGTATGCAGAATTGATAGGCCTTGCGTGGTAGATGAGATCCATCTT
CGAAGATTTGATGGCATGTTGGAACATGAGGGGGCTCATAGGTGTGTTTTTGCTAGTATC
ACTGTGAAAGCACCAGTTCGGGAGGTATGGAATGTTCTCACAGCATATGAGAATTTGCCC
GAATTCGTACCAAACCTGGCTATCAGTAGGATTGTTCTTCGTGATAATAACAAGGTCCGC
ATAATGCAGGAGGGTTGCAAAGGCCTGCTGTATATGGTCCTTCATGCCCGTGTTGTTATG
GATCTTCGTGAAAAATTTGAGCAAGAGATCAGGTTTGAACAAGTTGAGGGTGATTTTTAC
TCGTTTAAAGGGAAATGGCGCTTAGAACAACTTGGGGATCAGCACACCCTGTTGAAGTAC
ATGGTTGAGACTAAGATGCATAGGGACACCTTTCTCTCTGAGTCTATCCTTGAAGAGGTC
ATATATGAAGATCTTCCATCAAACTTGTGTGCAATCCGTGATTATATTGAAAAGGCTGGA
GCCAAGGGTAGCAACTCCACAGCTCATTCTGATGTGTCCATAGACCCAGATGCTTATCAT
GCTGAAAGCAGGCAATCTGAGCAAGCATCTGTGTCTTGCTCATCCAGTACCATGAAGCAG
AGACCAAAAGTCCCAGGGTTGCAAAAGGACATTGAGGTCCTAAAATCAGAGCTTGAGAAT
TTCATTGCAGAATATGGTCAGTATGGTTTCATGCCTAAGAGAAAGCATCTCCGGTCTCAT
GGAAGGGTGGATATCGAGAAGGCAATAACACGAATGGGTGGGTTCCGGAAGATTGCCAGC
ATAATGAACCTTTCTCTTTCTTACAAAAATCGAAAACCAAGAGGCTATTGGGATAATCTG
GAGAACTTGCAAGAAGAGATCAGCCGGTTCCAGAAAAGTTGGGGGATGGATCCTTCTTAT
ATGCCAAGTAGAAAATCTTTTGAGAGGGCAGGTCGTTACGACATTGCTCGGGCATTGGAA
AAATGGGGTGGGGTGCAGGAGGTTTCACGCCTTCTCTCTCTTAAACTAAGACGTCCTAGA
AGGCAAGGCGACTTGGATGACGAGAGCCGGTCTGAATCCCCATCTGAGATGACAAAGAAG
CACGGGGTGAAACCTGATAAAGGCAATGTTTCCCCAGATGCCCAGAAATGGCTCCTGAAG
CTGAAGGATTTGGATGTCAACTGGGTGGAATACTAGATTAGCTTTGAACAAAAGATATGG
TCTCTCATTATTAGCTCAACTCTTTCCCTTCTTCGGAGGTGATCTGGAAGCATTCCGACA
AAAGACCCCGCAAATTGTGTACAGAAAAGTGCGATACACCGGCCAACCCTGAAGGCAAGC
CACCAGCAGGCAACAGGTTTTCTTGTGTCAGTAATCACGACTCTTGGCTACTGCGTATCT
AGAACTGTTGACAATACTAACAGCTTTGTTGCGGTCAAATTGATCCGTGGATTTGACAAA
GTCTAGCCACTAAACGCAGAACGGGTGTGCAATTTCGTGTTTGAGTCAGCCTTGCCTTTC
AAAGCAGGTGGTCATCGCTGGGTTAAACTGTGGTGTTGACACTTCACAGTTTGGTCGCCT
ACTTTGTTAGTGATGATGTAAGTTGACCTGGCCCTTTTGTTTTGACACGGAAAAGAGAAG
GTTACCATCCAGTAGCAGTTTCAGTCGGCACGTTTTACATTACATTACATTGGTCTTAAT
GTGTCAATTTTTTTTGGTGCTAATTTGGCTAGTAGCATGGCGGGTCTGTATGAGAAACCA
GCTAATCAGAACGTGAATTTTAAAGACCAAAAAAAAATTAATGGGAAATTAAAAGGTCCC
ACCGGGATTCGAACCCAGGTCGCCAGATTCAAAGTCTGGAGTGCTAACCACTACACTATG
GAACCATTTCTGTCATTTAAGTTAACTTTAATTTATAAGTTAGAAACCTGGGTGGCGAAA
TGAACATTCCTGTTTGTTTGTTGGGCGAGACAACATTTCTCAGAGCACGTGCGCAGAGCA
AGGACTCTGAAATTACCAAATGGCAAATGCACCAGACCTACTCTTTCCCTATCTGAATCT
GAATTAAACACGCCAGCGTACTCTATTGGTCTTTGGCCAATGGCTTGGCAGTTTGCAGTA
CGTTCCAATCAGATCGTAGCCCTGAATTAGGGTTCGATCTGAAAAGCAAGTGGCCAGGCC
AAGCCACTTGCTTTGACAACTTGGCGCAAGATGCATCTTGATCCCCCTAGCATTGAACCG
CACAGAAGCTGACCGAGATGTTTCGCTGAATGATCCCCTGGCAGTGTGGCGACTGGTGAG
TAGTGACTGATGAGACGAGAAACACAGGAGACCCAAAACAGTTTTTCTCTAGAAAAACAA
AAAGGAGAAGTGCAACAATATTCAGTACTGATAGTCAAACTCTCTAACAGCTCCGCATTA
TTATTATGAATTTATTTATGATACAATCTATTTGCCTCAAGAGCTGCTCTGAACTTCCCT
TGATGAGGTAAACAAAATTGTTATTAAAAAAACTACTGCATCAGTTTTTGAAACAAACAG
TCCATACTAAAATATGCCGGTTATTTTGTACAAATTGCATTGCTCAACATCAAGCTCGAT
CTGAATTTGAAGCTTACAATTACATAGTATTGCCATATGGAAGCCACAGTACCAGTGAAA
GATCAGTTTGTTCTGCCGCCAAGGTTCGCCAGCCAGAGCTTAGAGCAAATCATATCGTCG
ATTCCCTAACCGCTCTACAAATCTGTACATTTTCCTCTTCCTGGGAATGGATGCCTGCGT
GTGATCATTTTGCTTTGCTATCCAGTTCGCCGGATGATGATGATCTCTGCCATGGATCGG
ATGAGGATGACGCACACGCGCCTTTTCACATCGTCATGTACGGCTGCGGCGACAGCAGCT
GCCGCGACACGCGCTCACGGTTCCTGGCCGACTCGGAGCGGCCCAGCGCCATCTCCTGCT
CCAGGGTGGGCGATGGCGCGGGCGCGACCGGAGCCCCCGACGAGACGACCGTCGAGACCA
TGCTGGAGCTGACGGCACTGGTGGCCGTGGTGGTGCTCAGAAAACTGTCGGACGACTTCG
GGGGCGGCGGCCTCTCCAGCTCCATGACCCCTTCCAGCATCTGCACCACCTTCCCCATGG
ACGGGCGCTGCGCCGGCTGCTCCTGGATGCACCAGAAGCTCACCTGCACAGCGCGCTCCA
CCTGCGCCATGTCGAGGTCCTCCGCGGGGAGCCTCCTGTCGACGATGCCGGCGAGGTTTC
CCCTCTCGTACTCCTCGTACGCCCACACCGAGAACTTCTTCCTGCCGGTCTCCTCCGACA
CGTCGAAGTTGCGGCGGCCACTGACGGTCTCCAGCAGCACCATCCCGTAGCTGTACACGT
CGGACTTGGCCGTGATCGGCAGGTTGGCGAGCCACTCCGGCGCCAGGTAACCCCTGGTGC
CGCGCACGCTGGTGAGCGTCCGGTGGCGGTGGTCCTTGGGGTTCACCAGCTTGGCCAGCC
CGAAGTCGGACACCTTGGCGTTGAAGTGCTCGTCCAGGAGGATGTTCTCGGGCTTGATGT
CGCAGTGCACGATGCAGTCGCGGCACTCCTCGTGCAGGTACGTGATGCCCCGTGCCGTGC
CGACGGCCACCGCGAACCGCGTCGGCCACGGCATCTTCCCGCCCGGCGGCGGCGCGTCGC
GGTCGCCGCCGAAGAGGAACGCGTCCAGCGACCCGTTCTTCATGAACTCGTACACCAGCA
GCCGGTGCCGGCCCTCGGAGCAGAAGCCGATGAGGCGGACCAGGTTGAGGTGGTGCGTGC
TGCTGATGGTGGCCACCTCCATCCGGAACTGCTTCTCCCCCTGCTCGATCCCCTCCAGCT
GCTTCACCGCCACCACCGTCCGGTTCGCCAGCACGCCGCGGTACACGGCGCCGAACCCGC
CGGCGCCCAGCTTCTCCTTGAACCCCTTGGTGGACCGCTGCATCTCGCGGTACGAGAACT
GCACCGGCGCGCCCGACGCGTACTCCAGCAGCGCGTACTGCGCCGACGCCGGACCGAACT
TGGGGCTGTGCCGGCAGAAGAACCACCAGAGCGCCCACTCGCAGAGCACCAGACCGGAG