Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90639
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:1409714:1411795:-1 gene:SORBI_3001G016100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTCGCGCTCCACGCGAAGCAGCCCACGCTTCGTCTACTCCCCGCGCCAACGAGCCAT
GTCATTGCCCGCCCGCCCACGGCGGCGGCCAATGTACGCCTCGGTGCGCCGCCGCCGCCT
GACGTCGTCCTCGACTGCAAACGGTTGGACGCGCTGATGAAGTCCGGGAGGCTAAGTGAC
GCGCTGGACCTGTTCGACCGTATGCCTCGCAAGAACGTCGTCGCGTGGACCACGGCCATC
TCCGGGTGCACGCGGAACGGGCAGCCCGAGGCGGCCGCGGCCATGTTCGCGGACATGCTG
GAGTCCGGCGTCGCGGCCAACGACTTCGCGTGCAACGCGGCGCTGGCGGCCCTCGGCGAG
CAGGTGCACTCGCTCGCCGTGCGGGCGGGCTTCGCCGCCGACGCCTGGATCGGGAGTTGC
CTCATCGAGCTCTACTCGAGGTGCGGCTCCATGTGGGCGGCTGAGGAGGTGTTTCGCAGG
ATGGAGGCGCCGGATGTCGTGGGGTACACTTCGCTTGTCTCGGCGCTCTGCAGGAACGGC
GACCTCGCACGGGCTGTGGAGGTGCTCTGTCAGATGATGAGGCAGGGGTTGCAGCCGAAC
GAGCACACGATGACGAGCATGCTGGCGGAGTGCCCTCGAATGATTGGCGAGCAGATACAT
GGATATATGCTCAAGGTAATGGGTTCACAGAGCGTCTATGCATCGACTGCACTGATTGAC
TTCTATTCGAGGTACGGTGACTTTGACATGGCGGAGACCGTGTTTGAAAATCTTGACTCC
AAGAACGTGGTGTCGTGGTGCTCCATGATGCAGCTGTGCATTAGGGATGGAAGGTTGGAA
GATGCACTGCGAGTGTTCAGCGAGATGATTTCGGAGGCCGTTGAGCCAAATGAGTTTGCA
TTTTCAATTGCTCTCGGGGCTTGTGGGTCTGTTTGTCTGGGGCGTCAAATTCACTGCTCA
GCCATCAAGTGCAACTTAATGACTGACATCCGAGTATCAAATGCTTTGCTCTCTATGTAT
GGTAGGAGTGGTTTTGTTTCAGAAGTCGAGGCTGTGCTTGGCAAGATTGAAAATCCTGAT
CTTGTTAGCTGGACAGCTGCCATTTCTGCGAACTTCCAGAATGGTTTCAGTGAGAAGGCC
GTAGCATTGCTTCTTCAGATGCATTCGGAAGGTTTTACACCGAATGACTATGCCTTCTCT
AGTGGTCTGAGTTCTTGTGCAGACCTGGCATTGCTGGATCAAGGAAGGCAGCTTCATTGC
CTGGCACTGAAACTGGGGTGTGACTTCAAAGTTTGTACTGGGAATGCACTAATCAACATG
TACTCCAAGTGTGGTCAAATTGGATCTGCAAGGCTTGCATTTGATGTCATGAATCTTCAT
GATGTCATGTCTTGGAACTCACTGATCCATGGTCTCGCACAGCATGGAGCTGCAAACTTG
GTACTGGAGGCATTCAGTGAGATGTGTTCAAGTGGTTGGCAGCCAGACGATTCGACATTT
ATAGCAGTCTTGGTAGGGTGCAATCATGCAGGTCTGGTGAAGGAAGGGGAGACATTCTTC
AGACTAATGACTGATCGGTATGGTCTCACACCGACCCCTTCTCACTATGCTTGCATGATC
GACATGCTGGGTCGGAATGGTAGATTCGATGAGGCGCTACACATGATCAAGAATATGCCA
TTCGAGCCTGATGTTTTGATTTGGAAGACACTATTAGCATCTTGCAAGCTGCACAAGAAT
CTTGACATTGGAAAACTCGCAACAGACAAGCTGATGGAGCTTTCAGAAAGAGACTCCGCG
AGCTACGTGCTGATGTCAAACCTCTATGCGATGCATGAAGAATGGCAGGATGCGGAGAGG
GTGCGTCGGAGGATGGATGAAATTGGGGTGAAGAAGGATGCCGGTTGGAGCTGGATCGAG
GTCAAGAACGAGGTCAGCACCTTTGTTGCAAGAGACACGTCTCATTCAGACTCCGCATCC
ATCTATCAGATGCTTGCAGAGCTCGTTGTTGTGATGCAAGATACAGAGTTAGATGTTCAT
ATGCAGATTTAG

Peptide Sequence

PEP ID

OQU90639
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:1409714:1411795:-1 gene:SORBI_3001G016100 transcript:OQU90639 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVALHAKQPTLRLLPAPTSHVIARPPTAAANVRLGAPPPPDVVLDCKRLDALMKSGRLSD
ALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADMLESGVAANDFACNAALAALGE
QVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSALCRNG
DLARAVEVLCQMMRQGLQPNEHTMTSMLAECPRMIGEQIHGYMLKVMGSQSVYASTALID
FYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISEAVEPNEFA
FSIALGACGSVCLGRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIENPD
LVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHC
LALKLGCDFKVCTGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANL
VLEAFSEMCSSGWQPDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACMI
DMLGRNGRFDEALHMIKNMPFEPDVLIWKTLLASCKLHKNLDIGKLATDKLMELSERDSA
SYVLMSNLYAMHEEWQDAERVRRRMDEIGVKKDAGWSWIEVKNEVSTFVARDTSHSDSAS
IYQMLAELVVVMQDTELDVHMQI

Transcript Sequence

Transcript ID

OQU90639
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:1409714:1411795:-1 gene:SORBI_3001G016100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTCGCGCTCCACGCGAAGCAGCCCACGCTTCGTCTACTCCCCGCGCCAACGAGCCAT
GTCATTGCCCGCCCGCCCACGGCGGCGGCCAATGTACGCCTCGGTGCGCCGCCGCCGCCT
GACGTCGTCCTCGACTGCAAACGGTTGGACGCGCTGATGAAGTCCGGGAGGCTAAGTGAC
GCGCTGGACCTGTTCGACCGTATGCCTCGCAAGAACGTCGTCGCGTGGACCACGGCCATC
TCCGGGTGCACGCGGAACGGGCAGCCCGAGGCGGCCGCGGCCATGTTCGCGGACATGCTG
GAGTCCGGCGTCGCGGCCAACGACTTCGCGTGCAACGCGGCGCTGGCGGCCCTCGGCGAG
CAGGTGCACTCGCTCGCCGTGCGGGCGGGCTTCGCCGCCGACGCCTGGATCGGGAGTTGC
CTCATCGAGCTCTACTCGAGGTGCGGCTCCATGTGGGCGGCTGAGGAGGTGTTTCGCAGG
ATGGAGGCGCCGGATGTCGTGGGGTACACTTCGCTTGTCTCGGCGCTCTGCAGGAACGGC
GACCTCGCACGGGCTGTGGAGGTGCTCTGTCAGATGATGAGGCAGGGGTTGCAGCCGAAC
GAGCACACGATGACGAGCATGCTGGCGGAGTGCCCTCGAATGATTGGCGAGCAGATACAT
GGATATATGCTCAAGGTAATGGGTTCACAGAGCGTCTATGCATCGACTGCACTGATTGAC
TTCTATTCGAGGTACGGTGACTTTGACATGGCGGAGACCGTGTTTGAAAATCTTGACTCC
AAGAACGTGGTGTCGTGGTGCTCCATGATGCAGCTGTGCATTAGGGATGGAAGGTTGGAA
GATGCACTGCGAGTGTTCAGCGAGATGATTTCGGAGGCCGTTGAGCCAAATGAGTTTGCA
TTTTCAATTGCTCTCGGGGCTTGTGGGTCTGTTTGTCTGGGGCGTCAAATTCACTGCTCA
GCCATCAAGTGCAACTTAATGACTGACATCCGAGTATCAAATGCTTTGCTCTCTATGTAT
GGTAGGAGTGGTTTTGTTTCAGAAGTCGAGGCTGTGCTTGGCAAGATTGAAAATCCTGAT
CTTGTTAGCTGGACAGCTGCCATTTCTGCGAACTTCCAGAATGGTTTCAGTGAGAAGGCC
GTAGCATTGCTTCTTCAGATGCATTCGGAAGGTTTTACACCGAATGACTATGCCTTCTCT
AGTGGTCTGAGTTCTTGTGCAGACCTGGCATTGCTGGATCAAGGAAGGCAGCTTCATTGC
CTGGCACTGAAACTGGGGTGTGACTTCAAAGTTTGTACTGGGAATGCACTAATCAACATG
TACTCCAAGTGTGGTCAAATTGGATCTGCAAGGCTTGCATTTGATGTCATGAATCTTCAT
GATGTCATGTCTTGGAACTCACTGATCCATGGTCTCGCACAGCATGGAGCTGCAAACTTG
GTACTGGAGGCATTCAGTGAGATGTGTTCAAGTGGTTGGCAGCCAGACGATTCGACATTT
ATAGCAGTCTTGGTAGGGTGCAATCATGCAGGTCTGGTGAAGGAAGGGGAGACATTCTTC
AGACTAATGACTGATCGGTATGGTCTCACACCGACCCCTTCTCACTATGCTTGCATGATC
GACATGCTGGGTCGGAATGGTAGATTCGATGAGGCGCTACACATGATCAAGAATATGCCA
TTCGAGCCTGATGTTTTGATTTGGAAGACACTATTAGCATCTTGCAAGCTGCACAAGAAT
CTTGACATTGGAAAACTCGCAACAGACAAGCTGATGGAGCTTTCAGAAAGAGACTCCGCG
AGCTACGTGCTGATGTCAAACCTCTATGCGATGCATGAAGAATGGCAGGATGCGGAGAGG
GTGCGTCGGAGGATGGATGAAATTGGGGTGAAGAAGGATGCCGGTTGGAGCTGGATCGAG
GTCAAGAACGAGGTCAGCACCTTTGTTGCAAGAGACACGTCTCATTCAGACTCCGCATCC
ATCTATCAGATGCTTGCAGAGCTCGTTGTTGTGATGCAAGATACAGAGTTAGATGTTCAT
ATGCAGATTTAG