Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90600
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:718150:723547:-1 gene:SORBI_3001G007200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCAGGGCGGTGTCGTGGCCCACGCCGCCGCCGCCGCGGCGGCCGCGTCGACGGTGACC
ACTGCGGTGGCGCCTCCGGTGCCGGCGCACGCGGCGGTGGTGGGAAACGGCGGCGGGCCG
GCGGCCGCCGCGCCGCCGCCACCGTTCCTTATGAAGACGTACGAGATGGTGGACGACCCG
GCCACCGACGACGTCGTGTCCTGGGGCCCCGGGAACAACAGCTTCATCGTCTGGAACACG
CCCGAGTTCGCCAGGGACCTCCTGCCCAAGTACTTCAAGCACAGCAACTTCTCATCATTC
GTCAGGCAGCTCAACACCTACGGGTTTAGAAAGGTTGATCCAGACAGATGGGAATTTGCA
AATGAGGGTTTTCTTAGAGGACAAAAACATCTGCTGAAGACTATCAACAGAAGGAAACCA
TCCTTGCAGGGGAACAGCCAACCACAGCAACCTCAGTTGCAGAATGCTCCTGTGCCTTCC
TGTGTAGAGGTGGGCAAGTTTGGGTTGGAGGAAGAGATAGAACGGCTGAAAAGGGATAAG
AATGTTCTTATGCAAGAGCTTGTCAGGCTGAGACAGCAACAGCAAACAACTGACCATCAG
CTTCAGACTTTGGGCAAGCGTCTTCAAGGGATGGAGTCACGGCAGCAACAGATGATGTCT
TTCCTGGCTAAGGCAATGCAAAGTCCTGGTTTCCTAGCACAGTTTGTACAGCAAAACGAG
AATAGTAGAAGAAGAATAGTAGCTGCGAACAAGAAAAGGCGGCTACCCAAGCAAGATGGT
GGCCTAGACTCTGAAAGTGCTGCTGCTTCGTTAGACGGTCAAATTATCAAGTATCAACCT
TTGATCAACGAAGCAGCCAAAGCAATGCTAAGGAAGATCCTAAAGCTAGATTCTTCGCAT
AGGTTTGAATCTATGGGCAATTCAGATAATAATAATTTTCTGCTGGAGAATTATATGCCA
GCTGCTCAAGCTTTTGAGAGCTCTTCGTCAACAAGAAATTCTGGGGTCACCCTTGCAGAG
GTTCCAGCTAACTCGGGCTTGCCCTATGTCAGCGCAAGCTCTGGACTGTCAGCTATCTGT
TCTCCTTCAGTGGCTCCTGAAATCCAGTGCCCAGTTGTGCTGGACAACAAGTTGTCTAAC
CAAGTGCCCAACATGAGTGCTGTGCCTCCTGTTTCAAACCCTATAACAGCAGGCTCAAGT
GACATCAGCATTCCGGAATTCTCAGATCTGGCGGACTTGGTAAACGAAGACTCTGTCAAT
ATTCCTGGAGGGGCCTTTGAGATGCCTGGTCCTGAGTTTCCCCTGCCAGAAGGTGATGAC
AGTGTCCCCATCGAGACTGATGAGACCATGTACAACAATGACGAGACTCAGAGCCTTCCA
GGCATCATCGACTCCTTCTGGGAGCAGTTCCTGGTAGGCAGCCCTCTATCCGCCGATAAT
GATGAAGTTGATTCAGGCGGACTAGATGCAAGGGGTTCACCACAGGAGAATGGGTGGAGC
AAAGTGGGGAACATCTCCAATCTTACAGAACAGATGGGCCTTCTATCATCAACAAATCAC
CGGGACTCAGGGAATGGGCTGTAA

Peptide Sequence

PEP ID

OQU90600
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:718150:723547:-1 gene:SORBI_3001G007200 transcript:OQU90600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MQGGVVAHAAAAAAAASTVTTAVAPPVPAHAAVVGNGGGPAAAAPPPPFLMKTYEMVDDP
ATDDVVSWGPGNNSFIVWNTPEFARDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDRWEFA
NEGFLRGQKHLLKTINRRKPSLQGNSQPQQPQLQNAPVPSCVEVGKFGLEEEIERLKRDK
NVLMQELVRLRQQQQTTDHQLQTLGKRLQGMESRQQQMMSFLAKAMQSPGFLAQFVQQNE
NSRRRIVAANKKRRLPKQDGGLDSESAAASLDGQIIKYQPLINEAAKAMLRKILKLDSSH
RFESMGNSDNNNFLLENYMPAAQAFESSSSTRNSGVTLAEVPANSGLPYVSASSGLSAIC
SPSVAPEIQCPVVLDNKLSNQVPNMSAVPPVSNPITAGSSDISIPEFSDLADLVNEDSVN
IPGGAFEMPGPEFPLPEGDDSVPIETDETMYNNDETQSLPGIIDSFWEQFLVGSPLSADN
DEVDSGGLDARGSPQENGWSKVGNISNLTEQMGLLSSTNHRDSGNGL

Transcript Sequence

Transcript ID

OQU90600
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:718150:723547:-1 gene:SORBI_3001G007200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCAAATTACGTAATTAGTTATTTTTATCTCTATTTAATGCTTCATGTATGCATCCAAAGA
TTCGATGTGACGGGAAATCTTGAAAAAAATTAAAATTTTAGAGTGAACTAAACAAGGCCA
ACTACCCGAATCCAAAAGCTAATTTGCGGTGTTGCTTCACTTCAAGTTCCATAGAGCAGA
ATGACACAGGTGCTATAGCCTATAGCCTTGACCGGTTGCCCTGATGGGATGAAAGAAAAG
AAAATAGAGGGGGAAAAAACAACGACAATTGTTAATTTATTATCACATTGGAGCAAAAAT
CTTCTCTTCTCCTACCTATCTAAATTTTTCATTGCACGGTGTGCCCTTCTTTAGTCCTAA
ACTATTCGCTCAAACAGTTATTTTGCCCATTTAAACACCATGTATGCTACAAGGTGGTAA
GTCTTTTAGTTTAGTTCTATGGTCACCTGTTTAGTTAGTTGTTTTAACCTATTTGATGAG
TTTGTTAGCCATAACAATAGATAAAATGGTAGTTGATCAACTATTTACTATTTGGTATTT
AGAAAGGTACTAGCCCTTTTAAGCTTTTACGGATAAAGGTTGAGGCTTTAAGTTTCTTGG
TTCTCGAAAGGATGCATTATTGTCTCTAGCGGACTTAGAGGAAGGTAAGATGATAGTGGC
AGCGGGAGATGGTGTCGGTCAAGATAGTAGAGTGCCACTTGATGTAGACTGTGAAAGATA
ACCTTTAGAGGTGATGAAGGTGCAGGAATGGTTGCCACCTCGAGCACCGACGACGGGAGC
AGCAAGAGAGGAGTAGGACTGCGAGGATGAGTGCCTATAAAAGAGAGAAAGACCTAAAGC
CTAGCATGTAAGATTACAATTTTGCACTCTCTTATGTTAGACTTTGACTACTCAAATTCA
AATTTATATACGTTATTAGACACTAGATATTCAGACTTGATCATAACTCTTGCAAACATA
TCCAAACTCAGATAAATATTCATTCATATGATTTGCACCTTAAACATGACCTCATGGGTA
TGAGGATATCCATGAATGATACTAGACGCAGGATCACTCATTCAGTGCCATACTAGCACC
TGGACTGGATTCCCCTCAAGCGGGGGGGAGGAGGAAGTGAGCAGAGAAGAGACCGCGACG
GCGGGTGGGTCAGGTTCCCCTTTTAGGTTAGGCCGCCACGCGCGCCATTTTACACAAACA
CCCCCGCCAATAAACAATTATTTAAATTGCGGGCGCCCAACCACGCCATATCTTCTTCTC
CACTCCCCTCGGCAATTCCAATTTCCAATTCCCCTTTCCTCTCTCCCTCCCCCTCCCCTG
CAATCGCAAACACCAGCGGCGGCGCCGGGCCCCGAAAACCCTCGCGCGCGACGGCCAACG
CCAACGGAGCCCGCCAGCTAGCTTCAATCGCGAGTGATCCCCACCGCCCTCTCCTCCGGT
CCTCCGAACCCTAGCCGTCCCCCCATGGCGGCCTGAGGCGCGTACGGATCGCGCGGGAGA
TGCAGGGCGGTGTCGTGGCCCACGCCGCCGCCGCCGCGGCGGCCGCGTCGACGGTGACCA
CTGCGGTGGCGCCTCCGGTGCCGGCGCACGCGGCGGTGGTGGGAAACGGCGGCGGGCCGG
CGGCCGCCGCGCCGCCGCCACCGTTCCTTATGAAGACGTACGAGATGGTGGACGACCCGG
CCACCGACGACGTCGTGTCCTGGGGCCCCGGGAACAACAGCTTCATCGTCTGGAACACGC
CCGAGTTCGCCAGGGACCTCCTGCCCAAGTACTTCAAGCACAGCAACTTCTCATCATTCG
TCAGGCAGCTCAACACCTACGGGTTTAGAAAGGTTGATCCAGACAGATGGGAATTTGCAA
ATGAGGGTTTTCTTAGAGGACAAAAACATCTGCTGAAGACTATCAACAGAAGGAAACCAT
CCTTGCAGGGGAACAGCCAACCACAGCAACCTCAGTTGCAGAATGCTCCTGTGCCTTCCT
GTGTAGAGGTGGGCAAGTTTGGGTTGGAGGAAGAGATAGAACGGCTGAAAAGGGATAAGA
ATGTTCTTATGCAAGAGCTTGTCAGGCTGAGACAGCAACAGCAAACAACTGACCATCAGC
TTCAGACTTTGGGCAAGCGTCTTCAAGGGATGGAGTCACGGCAGCAACAGATGATGTCTT
TCCTGGCTAAGGCAATGCAAAGTCCTGGTTTCCTAGCACAGTTTGTACAGCAAAACGAGA
ATAGTAGAAGAAGAATAGTAGCTGCGAACAAGAAAAGGCGGCTACCCAAGCAAGATGGTG
GCCTAGACTCTGAAAGTGCTGCTGCTTCGTTAGACGGTCAAATTATCAAGTATCAACCTT
TGATCAACGAAGCAGCCAAAGCAATGCTAAGGAAGATCCTAAAGCTAGATTCTTCGCATA
GGTTTGAATCTATGGGCAATTCAGATAATAATAATTTTCTGCTGGAGAATTATATGCCAG
CTGCTCAAGCTTTTGAGAGCTCTTCGTCAACAAGAAATTCTGGGGTCACCCTTGCAGAGG
TTCCAGCTAACTCGGGCTTGCCCTATGTCAGCGCAAGCTCTGGACTGTCAGCTATCTGTT
CTCCTTCAGTGGCTCCTGAAATCCAGTGCCCAGTTGTGCTGGACAACAAGTTGTCTAACC
AAGTGCCCAACATGAGTGCTGTGCCTCCTGTTTCAAACCCTATAACAGCAGGCTCAAGTG
ACATCAGCATTCCGGAATTCTCAGATCTGGCGGACTTGGTAAACGAAGACTCTGTCAATA
TTCCTGGAGGGGCCTTTGAGATGCCTGGTCCTGAGTTTCCCCTGCCAGAAGGTGATGACA
GTGTCCCCATCGAGACTGATGAGACCATGTACAACAATGACGAGACTCAGAGCCTTCCAG
GCATCATCGACTCCTTCTGGGAGCAGTTCCTGGTAGGCAGCCCTCTATCCGCCGATAATG
ATGAAGTTGATTCAGGCGGACTAGATGCAAGGGGTTCACCACAGGAGAATGGGTGGAGCA
AAGTGGGGAACATCTCCAATCTTACAGAACAGATGGGCCTTCTATCATCAACAAATCACC
GGGACTCAGGGAATGGGCTGTAATATCTTAATATGGTAGACTGGGATTCTGGTAATAAGT
GTCGCCTGCCATTTTGTTATTTTCCTTTTCGCCAAAATGATATGCCCGGTATATCAACAA
CCCAACCTATATGTGGGGGGATTCAATCTTCCAGCCATGAATGATCTTGGTACACACGCC
ACAGCCAGGAATTCACCTGCTTGTATCTAGTGTTGGCAGGCTTGAGAACACGAGGGTTAC
TTGTTAAATCTGTATGATTACTTGTACTGTAGTTGCTGTTGTTATTTCTGCTGCACTTGG
CAACTAACGTAGGGAAGGGGGCAATACTAGCACTGTACTGTATTACTGTCCGGAGGCTAA
TGCTGACTTGTGACAGATTGGTCGTTTTCCAATCACTGTTGCTGAAAGTGAGGTGCCCAT
TATCGTAACTTGGTTAAACTGGTTCGACTTTAGACGAAACTCAGTACTGTATGTTACAGT
AAGTATTAGCTCTCATCAGTCTCCGGAGGTGGGGTGTACATTTTCG