Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90598
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:1:684666:690615:1 gene:SORBI_3001G006700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGCAGAGGAACGTTCTGGCATTGGGTGAACATGTTCTGAAAGCTACTATTCGCAAG
CGAAAGCATGAGACTGCTATGGAGCACCCTGAAGGCAATGATGTGATGGTGTTCTCTCAG
CATGATCCAAGAAAACACCCTGCAACATTTGATGACAGAGCTAACTGTAAGAAGTCTAAA
TTAATTTCCTGTGGGAGTGGATCTATATTGGAGTCATATCGGAACTTTAAGACAAGTGGG
CTGCCTGTGCGTGTGCTTTTCTACCAACATGGTGACTGGAGTGATTTTCCAGAGGATGTT
GTCAATCTAGCACAACAGGACTTCCAGTTGAAGAGGCCAATTACTACTGCTGTGTTCCAG
AACAAGCACATCATGTTGGACTTCGTTCACATGATTTGCATAGATTATGAGATGACCATA
GACAAACCACTAGCATGGGTTGATGATCATGGCAAACACTTCTTTCCAGATTTATCTGCT
GGACTGTACACATCTAAACCATCTCAGCATGAGAAAGGTGAAGCTGATGAGTGTGATGGA
GTGTCAAGTGTAGCTGAAAGCTCAAGTTCGGTATCTGTTGGTGAAGTAGTTTCTCATAGC
AAGAGGATCAGTAATATTGCAGAGGACAACCTGAAAGCACATAACAGGCTGTATGAAGCT
GTTGGTGAAAATAATTCAGGTCCTTCATTTCATTTGAATGAATATTTTAGTGGAACCATA
CAAGCTACTGGCAAGCCAAACAATGGTCCACGTGTTGATTCAGCTGTGCAGAATTTGTTG
CTCAAAGGATTAGGTCAGCCTTTTAGCGAGAAAGATATTATTGCTATCTATAGAACACCA
CTGCTAGATCAGCAATGGCAAGTTCGTTGTGGTCTCTTCCAAAAGGAGGTTGAAGAGACC
AGGAGTCGTCGGGGGAATGCAAATGTGCGTTATGCTTGGCTTCCTTGCTCAAGATATACC
ATGGAGCAGATGACGACGCGAGGTGCTCTGGAAACTGCAAAGCCTAAGAAGGGGTCCATG
TTTGGTGTTGGGACTTGTCTTGCTCCTGCAAACTGTTCAAATTCATGTGCCAGATATTCT
GAGTTTCAAGAAGATGGCATCATCAGAATGATGCTGTGCCGTGTAATAATGGGTAATGTT
GAGGTTGTTTTGCCTGGATCAAAGCAATTCCAGCCATCCAATGAAAGTTTTGATAATGGC
GTGGATGATCTTCAAAATCCACAGAATTACATCATATGGGATTCTAATGTGCATAAACAC
ATATTTGCTGAATATGCTGTTATTGTCAAAGTACCTCCAGTGACCAATGGATGTTTGGTC
TTGAAGGATAGTGTGCCCAACATATCTGAGATCATAAGTACTGGTTCTCCAGACAATCTA
ACCAAGGAAGATAGGTTCCAAACCTTGGCACCGTCCGGTGTTGAACAAGAAGCACCTAAG
CTGGGGCATGCTCCAAGGGCGCCCTCCTCACCATGGATGCCCTTTTCAATGCTTTTTGCT
GCCATTTCCACAAAAGTGCCTCGTTCAGACATGGATTTGGTCATCAGATACTATGAAGAA
TTTAAGAGGAAAGGGATAAGCAGGAGCGACTTGGTGATACGGATAAGGCAAATAGTCGGA
GATAAGATATTGGTTTCTACAATAATGAGGCTTCACCAGAAGTCCCCACAGGTGGCAGCA
GCTGGGCTACCAAGAGCACTCGCAAGGGGGAAGAGGGAGTAG

Peptide Sequence

PEP ID

OQU90598
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:1:684666:690615:1 gene:SORBI_3001G006700 transcript:OQU90598 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEQRNVLALGEHVLKATIRKRKHETAMEHPEGNDVMVFSQHDPRKHPATFDDRANCKKSK
LISCGSGSILESYRNFKTSGLPVRVLFYQHGDWSDFPEDVVNLAQQDFQLKRPITTAVFQ
NKHIMLDFVHMICIDYEMTIDKPLAWVDDHGKHFFPDLSAGLYTSKPSQHEKGEADECDG
VSSVAESSSSVSVGEVVSHSKRISNIAEDNLKAHNRLYEAVGENNSGPSFHLNEYFSGTI
QATGKPNNGPRVDSAVQNLLLKGLGQPFSEKDIIAIYRTPLLDQQWQVRCGLFQKEVEET
RSRRGNANVRYAWLPCSRYTMEQMTTRGALETAKPKKGSMFGVGTCLAPANCSNSCARYS
EFQEDGIIRMMLCRVIMGNVEVVLPGSKQFQPSNESFDNGVDDLQNPQNYIIWDSNVHKH
IFAEYAVIVKVPPVTNGCLVLKDSVPNISEIISTGSPDNLTKEDRFQTLAPSGVEQEAPK
LGHAPRAPSSPWMPFSMLFAAISTKVPRSDMDLVIRYYEEFKRKGISRSDLVIRIRQIVG
DKILVSTIMRLHQKSPQVAAAGLPRALARGKRE

Transcript Sequence

Transcript ID

OQU90598
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:1:684666:690615:1 gene:SORBI_3001G006700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCTCTCCTCTCTCTGCGCCCACCGGAACGGAAACGCAACCCCAACCCAGGGGAGGAAGGA
AGAGGGGAAAGCAGGAGCCGACTGCCCACACCACCCACAGGAACGCCGCGGGGCAGGGGG
GGGGGGGAGGAGGAAGACGCCGGCAGTGGCGGCGCCTTAAAAGGCCAGGGCGCGGTTTTC
TGCTTGCCTATCTTTCACTTCCCCTCATCTACTACTGCGCTGCGCCGTTTAATTTAGCCC
GCAAGAGTAAACAACAAGAGGAAGAATTCTTGTGTTGCGGTCCAATCCGTTCCGCTGCTT
GAGCTTGACTGACTATCTCTATCCGATCTTCCGCGTGACGGGTCCGATGACCTACCACTG
GTATTGCTTACCTCCTTCCCCTTCCCTTTCCCCTTAATTTGGTCTCTTGTTGATCCTGTT
ATGTGGTATGCTAATTCGGATCGATTGAATTGAATTAAGCTATTCTGAGGCGATTCTTTT
AGTGCGTATTAGATGTATCATGTACTATTAGTTAGTGTCGCCCTGCCGGCGTTTCTGTTG
TGTTATTGTATACTAGTTGCTAGTTTGTGCTCCTAATCTTTACCTGTCATCATGCGTTTG
CTGCCTCATGGTAGGATGAACAACATTCTAGACCAATTGACACTAGCAGCGCCCCGCTGA
CTACATAACAAAGCAAAGCAATAGGGCAATAGGGAAGCGATTCCTGCACCCAATGATGAA
TTATGAACGATTCTAGTGCACTTATCGACCTAGGCATGACTCTAGCAGCGCTGACGTATC
ATATATGATCTTGCTAGTATTGTGCAGTCTTTGGACAGCACCGCACGATACTATATATAT
TGGTTAAGTTCACAACTGATTTGAAACTGTTTAAAAAAAATTGGACAAGTGATCTGTAAC
TGAGTGAAGTATATGTTCTATATTTACTGTAAGTACTAATGAAAGTCAACCTTGGATGTC
TGGTCGTCACTGTGCAACTGTTAATGAGCAAACTAATGTCGTACAAGTTTTAGACAAGTG
TTTGGAAAGTTTATTGTTCAATGTTTTATATTAACTGTAATATAAGTACCAGTGACAGTC
AACCTTGGGTGTCTGGTCATCAGCGTGCAACTTTTAATTAGCAAACTAATGCAGTACAAG
TTCTAGAGGAAGTGTTTGGAAAGTTTATTGTTAAATGTTATAATTCTGGCCTAATGAGCA
TAACAAGCTTTGCACGTCAGGGCCTCAAGGGTCGTCGTCATCTATCTATATTTGAGGTTC
TTGCGTCAACATGACAAGGTGCTTTTACTCCCATCAAACTGTTACGGGGGTAGCGCTGTG
GCTGTCATTTCTGTGTCCTAGGAAAATGGCCACAGAGAAGAGCCAAAGATATGAAGGGTC
TTTTTTACAACACAGACATGCCGGTAATGTCTGTTGCGGAAGCAGGGTTGGCACGCTTCT
GTGTCTTATGATCTTCTGCTGCCTCCTTGTGTGGCTGCACCAGCCATCAGCTCTACCAGA
GCAGCAGTATCCAGAGAGATGGTGTGGAGCACACACAATTCTACTCTGCGTGGGGTAAAG
AATCACTCTGGCAGAGTTGTTTTACTAGTCGTATTCGGTTTGCAAACAAGAAAACTCCCT
GGACTCAATTAAGCGTCGATAACTTTTTAACATCAAATAATATGGGCACTGGGGAAAAAG
GTCTTTACTTACTTTAGGAAGAAATAGTAATATGTCAACAAGGGAAGTTCTAAAGTTAAT
AACTCATGCATTTTGTGCCCTGTAACTATAATTGTAAATAAATGTTTACGCACAACACTT
TCATTCTCCTCTTGTTTTCTTCGTGTATCTATTTCATTCATTTTTATTTCCCTCTTCTTT
TTTCCTTTTTGGTCTCAGGTCCATTTCACTTACCGTTTTGGATAGCGTGGCTCGTTTTGG
AATTAACTTTATGTTAACAGAGTCTAGGTATCATTAGCTAGATTAAGCTAACTGCTTGAC
TTAGTAGTGTGTAAATCTGTAAAGAAAACTACTTGGTTTGGGTTGAGTCTCTATAAAAGA
AATGGAGCAGAGGAACGTTCTGGCATTGGGTGAACATGTTCTGAAAGCTACTATTCGCAA
GCGAAAGCATGAGACTGCTATGGAGCACCCTGAAGGCAATGATGTGATGGTGTTCTCTCA
GCATGATCCAAGAAAACACCCTGCAACATTTGATGACAGAGCTAACTGTAAGAAGTCTAA
ATTAATTTCCTGTGGGAGTGGATCTATATTGGAGTCATATCGGAACTTTAAGACAAGTGG
GCTGCCTGTGCGTGTGCTTTTCTACCAACATGGTGACTGGAGTGATTTTCCAGAGGATGT
TGTCAATCTAGCACAACAGGACTTCCAGTTGAAGAGGCCAATTACTACTGCTGTGTTCCA
GAACAAGCACATCATGTTGGACTTCGTTCACATGATTTGCATAGATTATGAGATGACCAT
AGACAAACCACTAGCATGGGTTGATGATCATGGCAAACACTTCTTTCCAGATTTATCTGC
TGGACTGTACACATCTAAACCATCTCAGCATGAGAAAGGTGAAGCTGATGAGTGTGATGG
AGTGTCAAGTGTAGCTGAAAGCTCAAGTTCGGTATCTGTTGGTGAAGTAGTTTCTCATAG
CAAGAGGATCAGTAATATTGCAGAGGACAACCTGAAAGCACATAACAGGCTGTATGAAGC
TGTTGGTGAAAATAATTCAGGTCCTTCATTTCATTTGAATGAATATTTTAGTGGAACCAT
ACAAGCTACTGGCAAGCCAAACAATGGTCCACGTGTTGATTCAGCTGTGCAGAATTTGTT
GCTCAAAGGATTAGGTCAGCCTTTTAGCGAGAAAGATATTATTGCTATCTATAGAACACC
ACTGCTAGATCAGCAATGGCAAGTTCGTTGTGGTCTCTTCCAAAAGGAGGTTGAAGAGAC
CAGGAGTCGTCGGGGGAATGCAAATGTGCGTTATGCTTGGCTTCCTTGCTCAAGATATAC
CATGGAGCAGATGACGACGCGAGGTGCTCTGGAAACTGCAAAGCCTAAGAAGGGGTCCAT
GTTTGGTGTTGGGACTTGTCTTGCTCCTGCAAACTGTTCAAATTCATGTGCCAGATATTC
TGAGTTTCAAGAAGATGGCATCATCAGAATGATGCTGTGCCGTGTAATAATGGGTAATGT
TGAGGTTGTTTTGCCTGGATCAAAGCAATTCCAGCCATCCAATGAAAGTTTTGATAATGG
CGTGGATGATCTTCAAAATCCACAGAATTACATCATATGGGATTCTAATGTGCATAAACA
CATATTTGCTGAATATGCTGTTATTGTCAAAGTACCTCCAGTGACCAATGGATGTTTGGT
CTTGAAGGATAGTGTGCCCAACATATCTGAGATCATAAGTACTGGTTCTCCAGACAATCT
AACCAAGGAAGATAGGTTCCAAACCTTGGCACCGTCCGGTGTTGAACAAGAAGCACCTAA
GCTGGGGCATGCTCCAAGGGCGCCCTCCTCACCATGGATGCCCTTTTCAATGCTTTTTGC
TGCCATTTCCACAAAAGTGCCTCGTTCAGACATGGATTTGGTCATCAGATACTATGAAGA
ATTTAAGAGGAAAGGGATAAGCAGGAGCGACTTGGTGATACGGATAAGGCAAATAGTCGG
AGATAAGATATTGGTTTCTACAATAATGAGGCTTCACCAGAAGTCCCCACAGGTGGCAGC
AGCTGGGCTACCAAGAGCACTCGCAAGGGGGAAGAGGGAGTAGCCGAGTAAGATTTGTTT
AAGCCTTGTCTTTTGAGAAATATAGAGTACAGATGCTTTGTCGACATGGCCAGACTCAAC
AAGTCGATGGAGGCAAAAAAAAAACGAGGGAGATGAGCAACTGTTGTAGTATAGTCTCAG
ACTCAAAAGTATTTAGGTCTTGACATACTAAAACTCAGATAAACTTTACTCTAAGTAGTG
TAATTCCGCTGGTCGATTGCCTCTGTAAAATCCGGACAGCTATCAATATGCCTTGTGCTT
TTCACCCTGTACTCCTTTTTTTTTTATTCGCTGTTCTTTTCAACTTTTTTTTCTTGCAAT
GGCAAATGGACTGCCTGCCCCTTTCAGCTTCTTCCATGCTTCATCAGTTTTATTTCTCTC
ATGCTAAACGTTCAGCTTGCTGGCTCATGTACCGTCAGATGGAAACAGTGGTCTGGTGTT
TTCCTTGCCTAAATAACGAGCAGTGATGCAAAGTACTATTGTTGGTTTCATTCTATGGGT
CTCACTGAATCGATCTGAATCAAAAACTTGTTTTTGCAAGGCATAATAGGATGTTGGAAA
GTCATTTTTGGAATTATGCTTTGCTTATTAACTTATATCTGGTAAATTAATACTGGTATG
AAACGAAATCTTATTCGGGCAGAATTTCTGATATAATTTTTGGTTATGCACTACCATATA
CATGTCCAAGTACTTGGCCATTGCACAACCAGCTGGTGGACAATAATAGTATTTAACGTT
GACGTGCCAAAAGATGGAGGGGCCATTGCCATTGTGTCATTTTCAGGCGTGGCTGTGGCC
GTGACAGTGGCAGCAGGCACTGCAAGTTGCGTGTTCACG