Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90545
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:77388760:77390745:-1 gene:SORBI_3002G427400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCATGGCCATGCCCGTCGCCCAGCTGTCCTTCGTCTTCCTTGTGCTCCTCCTCGCG
CACACCGCCTCTGCACAGCTCGCGCCGGCGCCGGCGCCTGACGCCGGCTGCAACGGCATC
TTCCTCAGCTACTCGCTGCAGGGCCGCGACCAGATCAGGCCTCACGTCGCCGAGGCCGAG
CGCAACTCCCAGCCATACTCGTTCCGCGCCAGAGCCACCGTCGTCAACTCGGACACCCGC
CCGCTCCGCTCCTGGGCGCTGCAGGTCACGTTCGTGCACGGCGAGATCCTCGTCAGCGTC
GACGGCGCCGTGCTCACCTCGGGCGCCGACCTGCCCTACAACACCACGGCGGGGGACGCC
GGCAGGCCCACGTCCTTCACCGGGTACCCGCAGACGGACCTCCTCACCCCGATCTCCACG
GCCGGGGACCCCGCCAAGACACAGGCCACCGTCAACCTCGTCGGCACGCTCTTCGCCGGG
CCCAGGCCCTACGAACCGCTCCCATCCTTTCTCTCGCTCGCCGACCCTTCCTACACGTGC
CCGCCGGCCACCAACGCCACGTCGCCGACCAACCTCACCACCTGCTGCGTGTTCACGGCC
GACGACGACGGGACCGACCCGGCGAGGAGCTTGAGCTTCCTCCCGCGCCGCACGGGCGAC
CTGGTGATCACCTACGACGTGCTCCAGTCGCACGAGACCACCTACCTGGCGCTCGTGACG
CTCGAGAACGACGCGCCGCTCGGCCGCCTCGACGGCTGGCAGCTGTCGTGGCGGTGGCAG
CGCGAAGAATTCATCAGCACCATGCGAGGCGCCTACCCGCGGGAGGTGGACACCGCCGGC
TGCCTGTACGGTCCCCAGGGACAGTACTACAAGGGCCTCGACTTGTCCAAGGTGCTCAAC
TGCGACCGCACCCCCGTCGTCCACGACCTGCCGCTGTCGCGGGCCAACGACACCGACATC
GGCCGGATCGACCACTGCTGCCGGAACGGCACCGTCCTGCCCAAGTCCATGGACGCCGCC
GCGCAGTCCAAGTCGGCGTTCCAGATGGAGGTCTACAAGATGCCGCCCGACCTCAACCGG
ACCAAGCTCTACCCGCCCACAGGATTCAACGTCACCGGCTCGTCGCCGTTCAACCCGGAG
TACGCGTGCGGGGCGCCCATCCCGGTGACCCCGTCGGAGTACCCCGACCCCAGCGGCCTC
GCGTCCACCACGGCGGCCGTGGCCACGTGGCAGGTGGTGTGCAACATCACCACCGCGTCG
AAGCCACCCAGGTGCTGCGTCTCCTTCTCCGCCTTCTACAACGAGTCGGTGGTCCCCTGC
CGGACCTGCGCGTGCGGCTGCCCCGCCACTCAGCCGGCGACGGCGACCTGCAGCACCACG
GCGCCGGCGATGCTGCTCCCGCCGCAGGCGCTGCTCATGCCGTTCGACCGGCGGGCCAGC
GAGGCGCTCGAGTGGGCGGACCAGAAGCACCTGGGCGTGCCCAACCCCATGCCCTGCGGC
GACTTCTGCGGCGTCAGCATCAACTGGCACGTCGCCACGGACTTCACCGGCGGCTGGAGC
GCGCGCCTGACGCTCTTCAACTGGGACGCCACGGACATGCCGGACTGGTTCACGGCCATC
GTCATGGACGGGGCGTACGACGGCTTCGAACAGGCATACTCCTTCAACGCCACACGCGTC
GGGAACAACACCATCTTCGTCAAGGGCTCCCAAGGCTTCAACTTCCTGCTCGGCGAGAGC
AACATGAGCGGCGTCGATTACCCCGTGCCCGGGAAGCTGCAGTCCGTCTTCTCCTTCACC
AAGAAGACCACCCCCGGCATCGACGTCATCGCAGGCGACGGCTTCCCGTCCAAGGTCTTC
TTCAACGGCGACGAGTGCGCCATGCCCTTGAGGATCCCGAGCCAGGGGACCAAGCCTGCT
GCTCTCCCTGTCCCCCTGCACTTGTGTTTATTGCTTCTTTCCACTTTCCTCTTGTTGGCT
TACTAA

Peptide Sequence

PEP ID

OQU90545
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:77388760:77390745:-1 gene:SORBI_3002G427400 transcript:OQU90545 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAMAMPVAQLSFVFLVLLLAHTASAQLAPAPAPDAGCNGIFLSYSLQGRDQIRPHVAEAE
RNSQPYSFRARATVVNSDTRPLRSWALQVTFVHGEILVSVDGAVLTSGADLPYNTTAGDA
GRPTSFTGYPQTDLLTPISTAGDPAKTQATVNLVGTLFAGPRPYEPLPSFLSLADPSYTC
PPATNATSPTNLTTCCVFTADDDGTDPARSLSFLPRRTGDLVITYDVLQSHETTYLALVT
LENDAPLGRLDGWQLSWRWQREEFISTMRGAYPREVDTAGCLYGPQGQYYKGLDLSKVLN
CDRTPVVHDLPLSRANDTDIGRIDHCCRNGTVLPKSMDAAAQSKSAFQMEVYKMPPDLNR
TKLYPPTGFNVTGSSPFNPEYACGAPIPVTPSEYPDPSGLASTTAAVATWQVVCNITTAS
KPPRCCVSFSAFYNESVVPCRTCACGCPATQPATATCSTTAPAMLLPPQALLMPFDRRAS
EALEWADQKHLGVPNPMPCGDFCGVSINWHVATDFTGGWSARLTLFNWDATDMPDWFTAI
VMDGAYDGFEQAYSFNATRVGNNTIFVKGSQGFNFLLGESNMSGVDYPVPGKLQSVFSFT
KKTTPGIDVIAGDGFPSKVFFNGDECAMPLRIPSQGTKPAALPVPLHLCLLLLSTFLLLA
Y

Transcript Sequence

Transcript ID

OQU90545
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:77388760:77390745:-1 gene:SORBI_3002G427400 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCATGGCCATGCCCGTCGCCCAGCTGTCCTTCGTCTTCCTTGTGCTCCTCCTCGCG
CACACCGCCTCTGCACAGCTCGCGCCGGCGCCGGCGCCTGACGCCGGCTGCAACGGCATC
TTCCTCAGCTACTCGCTGCAGGGCCGCGACCAGATCAGGCCTCACGTCGCCGAGGCCGAG
CGCAACTCCCAGCCATACTCGTTCCGCGCCAGAGCCACCGTCGTCAACTCGGACACCCGC
CCGCTCCGCTCCTGGGCGCTGCAGGTCACGTTCGTGCACGGCGAGATCCTCGTCAGCGTC
GACGGCGCCGTGCTCACCTCGGGCGCCGACCTGCCCTACAACACCACGGCGGGGGACGCC
GGCAGGCCCACGTCCTTCACCGGGTACCCGCAGACGGACCTCCTCACCCCGATCTCCACG
GCCGGGGACCCCGCCAAGACACAGGCCACCGTCAACCTCGTCGGCACGCTCTTCGCCGGG
CCCAGGCCCTACGAACCGCTCCCATCCTTTCTCTCGCTCGCCGACCCTTCCTACACGTGC
CCGCCGGCCACCAACGCCACGTCGCCGACCAACCTCACCACCTGCTGCGTGTTCACGGCC
GACGACGACGGGACCGACCCGGCGAGGAGCTTGAGCTTCCTCCCGCGCCGCACGGGCGAC
CTGGTGATCACCTACGACGTGCTCCAGTCGCACGAGACCACCTACCTGGCGCTCGTGACG
CTCGAGAACGACGCGCCGCTCGGCCGCCTCGACGGCTGGCAGCTGTCGTGGCGGTGGCAG
CGCGAAGAATTCATCAGCACCATGCGAGGCGCCTACCCGCGGGAGGTGGACACCGCCGGC
TGCCTGTACGGTCCCCAGGGACAGTACTACAAGGGCCTCGACTTGTCCAAGGTGCTCAAC
TGCGACCGCACCCCCGTCGTCCACGACCTGCCGCTGTCGCGGGCCAACGACACCGACATC
GGCCGGATCGACCACTGCTGCCGGAACGGCACCGTCCTGCCCAAGTCCATGGACGCCGCC
GCGCAGTCCAAGTCGGCGTTCCAGATGGAGGTCTACAAGATGCCGCCCGACCTCAACCGG
ACCAAGCTCTACCCGCCCACAGGATTCAACGTCACCGGCTCGTCGCCGTTCAACCCGGAG
TACGCGTGCGGGGCGCCCATCCCGGTGACCCCGTCGGAGTACCCCGACCCCAGCGGCCTC
GCGTCCACCACGGCGGCCGTGGCCACGTGGCAGGTGGTGTGCAACATCACCACCGCGTCG
AAGCCACCCAGGTGCTGCGTCTCCTTCTCCGCCTTCTACAACGAGTCGGTGGTCCCCTGC
CGGACCTGCGCGTGCGGCTGCCCCGCCACTCAGCCGGCGACGGCGACCTGCAGCACCACG
GCGCCGGCGATGCTGCTCCCGCCGCAGGCGCTGCTCATGCCGTTCGACCGGCGGGCCAGC
GAGGCGCTCGAGTGGGCGGACCAGAAGCACCTGGGCGTGCCCAACCCCATGCCCTGCGGC
GACTTCTGCGGCGTCAGCATCAACTGGCACGTCGCCACGGACTTCACCGGCGGCTGGAGC
GCGCGCCTGACGCTCTTCAACTGGGACGCCACGGACATGCCGGACTGGTTCACGGCCATC
GTCATGGACGGGGCGTACGACGGCTTCGAACAGGCATACTCCTTCAACGCCACACGCGTC
GGGAACAACACCATCTTCGTCAAGGGCTCCCAAGGCTTCAACTTCCTGCTCGGCGAGAGC
AACATGAGCGGCGTCGATTACCCCGTGCCCGGGAAGCTGCAGTCCGTCTTCTCCTTCACC
AAGAAGACCACCCCCGGCATCGACGTCATCGCAGGCGACGGCTTCCCGTCCAAGGTCTTC
TTCAACGGCGACGAGTGCGCCATGCCCTTGAGGATCCCGAGCCAGGGGACCAAGCCTGCT
GCTCTCCCTGTCCCCCTGCACTTGTGTTTATTGCTTCTTTCCACTTTCCTCTTGTTGGCT
TACTAA