Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90495
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:76974035:76976193:1 gene:SORBI_3002G422200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGACGCTCCCGAGCGCCAGCCGGTGGTCGTCGTCCACCGCGTGGCCACGGAGGGCC
GCTGGAGCGGCGTCGACGGCGCTGGCCGCCGCCGTCTTCGCGGTCCTGGACGTCGCCGAC
GCGCTCCTGTGCTTCGTGTACGCCCTCCTGGATGGCATCCTCGAGGACAGCCCCGTGCGC
TGCTACTGCCACAGGAGCTACGACGACCAAGTGGATGGCGGCGACCACGAGCACGAGGAG
GTCTCCGGTACGCTGTACGCGCGCGGCCGGAGGAGCGCCGTCAGGGACGCGATCCTGTAC
CTCCTGCGACACGTCGTCGGGAGGAGGGGACGGGCGCCGCCAGATGAGACGGTGGCGCCG
TGCAAGTGGCGCAGCCCCAGGTGGTCAGACTGCGCGTGCAAGTCGTGCGTCGCATGGCGG
GGCGGCGAAGGCGAAGGCGGCGGCGGCGGCGGCGAAGGCGGCCGGCTTCACGTCGTCGTC
AAAGAGCCGCAGCCGTATCGAAAAGATGCAGGAAGAAAACAGAGTGAGACGACGACCACT
CGTGACCCCGAGAACGCCATCTTCGTGCACGGCTTCACGTCGTCGTCGTCCTTCTGGGCG
GAGACGGTGTTCCGGGAGTCCTCCTCCGTCCTCCACGACTACAGGTTGTTCGCGGTGGAT
CTCCTCGGCTTTGGCCGCAGCCCCAAGCCTGCGAATTGCAAGTACAGAGTGAGAGACCAC
GTCGAGGCGATCGAGAGGAGCCTCGGCGAGCCGCCGCAGAGCCTGATGAGCGGCAGCGGC
TCCTTCCACCTGGTCGCGCACTCCATGGGCTGCATCATCGCCCTCGCCTTGGCTGCCAAG
CACCCGACCCGAGTCAAATCCATCACGCTCGTTGCACCGCCGTACTTCCTGGCGTGCGAG
CAGAAGCAGGCGAGCCAGGTGGCGCTCAACAGGCTGGCCGAGAAGAAGCTGTGGCCGCCG
CTGCTGTTCGGCTCCGCGGTGATGTCGTGGTACGAGCACGTCGGCAGGACCGTCTGCTTG
GTCGTCTGCAAGAACCACCTGCTCTGGGAGTGGCTCTTCAGCCTCTTCACGGGAAACAAC
ACGGGCGTGGATTTCAGGGTGAGGGATCTGACGAAGCACACCCACCACTCGGCGTGGCAC
ACCATGCACAACGTCATCTGCGGCGGGGCGGCGCTGCAGGACACGAACCTGGAGGCCGTC
GCGGCGGCCGGCATCCCGGTGCAGGCGGTCCACGGCGCCGACGACCAGGTGGTTCCGGTC
GAGTGCAGCCGCCATCTCAAGGCGAAGCTCCCGCGCGCCAAGCTCCGTGTCAATGTCATG
GACAGGCGCGACCACGCGACGGTGGTTCTGGGCAGGGAGAGGGACTTCGCCGAGGAGCTC
AAGGCGTTCTGGGTCTGGGGGTCAGCAACTCCTTCAACGAAGCGGAGGTTCAGAGGATGC
TGA

Peptide Sequence

PEP ID

OQU90495
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:76974035:76976193:1 gene:SORBI_3002G422200 transcript:OQU90495 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MATLPSASRWSSSTAWPRRAAGAASTALAAAVFAVLDVADALLCFVYALLDGILEDSPVR
CYCHRSYDDQVDGGDHEHEEVSGTLYARGRRSAVRDAILYLLRHVVGRRGRAPPDETVAP
CKWRSPRWSDCACKSCVAWRGGEGEGGGGGGEGGRLHVVVKEPQPYRKDAGRKQSETTTT
RDPENAIFVHGFTSSSSFWAETVFRESSSVLHDYRLFAVDLLGFGRSPKPANCKYRVRDH
VEAIERSLGEPPQSLMSGSGSFHLVAHSMGCIIALALAAKHPTRVKSITLVAPPYFLACE
QKQASQVALNRLAEKKLWPPLLFGSAVMSWYEHVGRTVCLVVCKNHLLWEWLFSLFTGNN
TGVDFRVRDLTKHTHHSAWHTMHNVICGGAALQDTNLEAVAAAGIPVQAVHGADDQVVPV
ECSRHLKAKLPRAKLRVNVMDRRDHATVVLGRERDFAEELKAFWVWGSATPSTKRRFRGC

Transcript Sequence

Transcript ID

OQU90495
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:76974035:76976193:1 gene:SORBI_3002G422200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGGTTGGCTTTGGCTCCCAGTCCCAGGGTCCCGGGCCGGCGTTTGCTTGCGGATTCCATC
GTCCGCGCACACCGACGACGTGGAGCAACGGCCAGCGCACGTGAGTGCACGGCCTTCCAG
CCCCACGCACGGCTCGCATCGATCCATTCCATCCCATCCGCTTCGCCCCTTGTCCCCCCT
CAGCTCGCCGCCACGCCTCCGTCCTGTCCCGTGCCTTCTGGCACCACCTACCATGGCGAC
GCTCCCGAGCGCCAGCCGGTGGTCGTCGTCCACCGCGTGGCCACGGAGGGCCGCTGGAGC
GGCGTCGACGGCGCTGGCCGCCGCCGTCTTCGCGGTCCTGGACGTCGCCGACGCGCTCCT
GTGCTTCGTGTACGCCCTCCTGGATGGCATCCTCGAGGACAGCCCCGTGCGCTGCTACTG
CCACAGGAGCTACGACGACCAAGTGGATGGCGGCGACCACGAGCACGAGGAGGTCTCCGG
TACGCTGTACGCGCGCGGCCGGAGGAGCGCCGTCAGGGACGCGATCCTGTACCTCCTGCG
ACACGTCGTCGGGAGGAGGGGACGGGCGCCGCCAGATGAGACGGTGGCGCCGTGCAAGTG
GCGCAGCCCCAGGTGGTCAGACTGCGCGTGCAAGTCGTGCGTCGCATGGCGGGGCGGCGA
AGGCGAAGGCGGCGGCGGCGGCGGCGAAGGCGGCCGGCTTCACGTCGTCGTCAAAGAGCC
GCAGCCGTATCGAAAAGATGCAGGAAGAAAACAGAGTGAGACGACGACCACTCGTGACCC
CGAGAACGCCATCTTCGTGCACGGCTTCACGTCGTCGTCGTCCTTCTGGGCGGAGACGGT
GTTCCGGGAGTCCTCCTCCGTCCTCCACGACTACAGGTTGTTCGCGGTGGATCTCCTCGG
CTTTGGCCGCAGCCCCAAGCCTGCGAATTGCAAGTACAGAGTGAGAGACCACGTCGAGGC
GATCGAGAGGAGCCTCGGCGAGCCGCCGCAGAGCCTGATGAGCGGCAGCGGCTCCTTCCA
CCTGGTCGCGCACTCCATGGGCTGCATCATCGCCCTCGCCTTGGCTGCCAAGCACCCGAC
CCGAGTCAAATCCATCACGCTCGTTGCACCGCCGTACTTCCTGGCGTGCGAGCAGAAGCA
GGCGAGCCAGGTGGCGCTCAACAGGCTGGCCGAGAAGAAGCTGTGGCCGCCGCTGCTGTT
CGGCTCCGCGGTGATGTCGTGGTACGAGCACGTCGGCAGGACCGTCTGCTTGGTCGTCTG
CAAGAACCACCTGCTCTGGGAGTGGCTCTTCAGCCTCTTCACGGGAAACAACACGGGCGT
GGATTTCAGGGTGAGGGATCTGACGAAGCACACCCACCACTCGGCGTGGCACACCATGCA
CAACGTCATCTGCGGCGGGGCGGCGCTGCAGGACACGAACCTGGAGGCCGTCGCGGCGGC
CGGCATCCCGGTGCAGGCGGTCCACGGCGCCGACGACCAGGTGGTTCCGGTCGAGTGCAG
CCGCCATCTCAAGGCGAAGCTCCCGCGCGCCAAGCTCCGTGTCAATGTCATGGACAGGCG
CGACCACGCGACGGTGGTTCTGGGCAGGGAGAGGGACTTCGCCGAGGAGCTCAAGGCGTT
CTGGGTCTGGGGGTCAGCAACTCCTTCAACGAAGCGGAGGTTCAGAGGATGCTGATTGTT
AGCAGGGCCACGGGCCAAGTAGTAGCAGGCCAGAGTGCGTTCTTGGGCCAAGCCCAAAGG
CTTCTCCGATCCTTTTCTTAAAGGGCCTTGTTTACTTCGAAAAGTTTTGTAAAATAGAAA
TAGTATCGCTTTCGTTTATATATTTGATAAATATTGTCTAATTATAGACTAATTGGACTC
AAAAGATTTATCTCGTCAATACCGACTAAACTGTGC