Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90466
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:76316326:76322556:1 gene:SORBI_3002G415900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGAAGCTAACATCGGAGCTGCTACGGCCGGTGGACCCGGCGGCGGCGCTGGACGAG
GCGGCGCTGCTGCGCTACCTGGCCGCCAACGTCCCGGGCTTCCCGGGCCCCGCGCCCGCG
CTGTCGCTGACCCAGTTCGGCCACGGCCAGTCCAACCCCACCTACTGCATCCACGCCTAC
GCCTCCGCCCCCGGCGGGGGACCGGCTAGGCGCTACGTGCTCAGGAAGAAGCCGCCCGGG
TCCATCCTCCAGTCCGCGCACGCCGTCGAGCGCGAGTACCAGGTTCTCAAAGCTCTGGGT
GATCACACAGATGTTCCTGTCCCGAAGGTTTATTGTCTATGCACAGATGCAAGTGTAATT
GGAACTCCTTTCTATGTAATGGAGTATCTGGAAGGAATAATATATCCTGATAGCGCGTTG
CCGGGGGTGACTCCATCTAAAAGGCGAGCTATATATTTTTATACTGCCAAAACTTTGGCT
GCTATACACAAAGTTGATGTTGATGCCATTGGATTGCAGAAGTATGGGAGAAGAGACAAT
TATTGCAAAAGACAAGTACAAAGATGGGAGAGGCAATATCTTGCATCCACTGGTGAAGGG
AAGCCTGCACGTTATCAGAGGATGCTTGATCTAGCTCGTTGGTTGAAAGAACATGTACCA
AAAGAAGATTCCTCAGCAGGATCGGGAACAGGTCTTGTTCATGGTGATTACCGCCCTGAT
AATCTAGTTTTTCATCCAACAGAGGATCGAGTAATTGGCGTTATTGACTGGGAACTATCT
ACTTTGGGAAATCAGATGTGTGATGTTGCTTATAGCTGCTTGCCATATATTATTGATGCA
TCTATCAGTGAAAGGACTTCTTATGGAGGGTTTCAAGATAATGGCATTCCAGATGGGATT
CCTCAACTGGAAGAGTACCTTTCCGTATACTGCTCTTTCTCTGCGAGACCCTGGCCTGCT
GCAAATTGGAAATTCTACATTGCTTTTTCTTTGTTTCGTGGGGCCTCTATCTATGCAGGA
GTATATCACAGATGGACTATGGGTAATGCTTCAGGTGGTGAGCGCGCTAAATTTGCTGGC
AAGGTTGCTAATGCTATGGTTGACTGCGCCTGGGACTTCATAAATAGAGTAAATGTCCTG
CAAGAACCACCTTCTAAGGGTTTTCAAGTCTCACCAGCACCGTGGCAAGAATTTCACAGA
GAGGAAGAAAGTTCAACATCTGAAAAGAATCAAGGCAAATTTGTTCCTAGTGAAAAGGTT
ATGCAGCTTCGAAAGAAACTAATAAAATTTATCGAAGATCACATATACCCTATGGAGGGT
GAGTTCTACAAACATGCACAATCAACCTCAAGATGGACAATTCATCCAGAAGAAGAAAAT
CTTAAAGCATTGGCAAAGAAGGAGGGCCTATGGAACTTGTTTATTCCGCTAGACAGTGCA
GCTAGAGCTAGAAAGCTACTGTTGGAAGACCATTCTCAAATTTCCCTTGGGAGTTCGAAT
GATATTTTGCTAGGCGCGGGTCTTACAAATCTTGAATATGGATATTTGTGTGAGATTATG
GGACGTTCAGTTTGTGCTCCACAAATATTTAACTGTGGTGCTCCTGATACAGGTAACATG
GAGGTCCTATTGAGGTATGGCACTAAGGAGCAACAGAAGCAATGGCTAGTTCCTTTATTG
GAAGGGACAATTCGTTCTGGATTTGCAATGACAGAACCACAAGTTGCATCTTCAGATGCG
ACAAATATAGAATGCTCAATATCCAGGCAAGGAGATTTTTATGTGATAAATGGAAGGAAG
TGGTGGACCAGTGGAGCCATGGATCCTAGGTGCAAAATCCTGATATTAATGGGAAAGACA
GATTTTTCTGCACCTAAGCATAAGCAACAGTCCATGATTTTAGTGGACATCAACACTCCT
GGGGTGCAGATAAAGAGACCATTGCTAGTCTTTGGTTTTGATGATGCACCTCATGGACAC
GCAGAGATTACATTTGAAAATGTGCGTGTTCCAGTAACAAATATCCTGCTGGGAGAAGGA
CGGGGTTTTGAGATTGCTCAAGGAAGACTTGGTCCTGGAAGGTTACATCATTGCATGAGG
CTAGTAGGGGCAGCAGAACGTGGCATGGATCTGATGGTAGAGAGGGCCTTAAGTAGGACC
GCATTTGGAAAGAGGATTGCACAGCATGGTTCCTTTTTATCAGACCTTGCAAAGTGTCGG
ATTGAATTGGAGCAGGCTAGGCTTTTAGTTCTTGAAGCGGCCGATCAACTCGATCGGCAT
GGGAACAAGAAAGCTCGTGGTATCCTCGCGATGGCCAAGGTGGCAGCTCCAAATATGGCC
CTGAAGGTGCTTGACATGGCGATGCAAGTTCATGGTGCAGCTGGTGTCTCATCGGACACG
GTCCTGTCGCACCTGTGGGCAACGGCTAGGACACTGCGGATCGCAGACGGTCCCGACGAA
GTACATCTCGGGACAATCGCTAAGCTGGAGCTGCAGAGGGCTCGGTTGTAA

Peptide Sequence

PEP ID

OQU90466
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:76316326:76322556:1 gene:SORBI_3002G415900 transcript:OQU90466 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAKLTSELLRPVDPAAALDEAALLRYLAANVPGFPGPAPALSLTQFGHGQSNPTYCIHAY
ASAPGGGPARRYVLRKKPPGSILQSAHAVEREYQVLKALGDHTDVPVPKVYCLCTDASVI
GTPFYVMEYLEGIIYPDSALPGVTPSKRRAIYFYTAKTLAAIHKVDVDAIGLQKYGRRDN
YCKRQVQRWERQYLASTGEGKPARYQRMLDLARWLKEHVPKEDSSAGSGTGLVHGDYRPD
NLVFHPTEDRVIGVIDWELSTLGNQMCDVAYSCLPYIIDASISERTSYGGFQDNGIPDGI
PQLEEYLSVYCSFSARPWPAANWKFYIAFSLFRGASIYAGVYHRWTMGNASGGERAKFAG
KVANAMVDCAWDFINRVNVLQEPPSKGFQVSPAPWQEFHREEESSTSEKNQGKFVPSEKV
MQLRKKLIKFIEDHIYPMEGEFYKHAQSTSRWTIHPEEENLKALAKKEGLWNLFIPLDSA
ARARKLLLEDHSQISLGSSNDILLGAGLTNLEYGYLCEIMGRSVCAPQIFNCGAPDTGNM
EVLLRYGTKEQQKQWLVPLLEGTIRSGFAMTEPQVASSDATNIECSISRQGDFYVINGRK
WWTSGAMDPRCKILILMGKTDFSAPKHKQQSMILVDINTPGVQIKRPLLVFGFDDAPHGH
AEITFENVRVPVTNILLGEGRGFEIAQGRLGPGRLHHCMRLVGAAERGMDLMVERALSRT
AFGKRIAQHGSFLSDLAKCRIELEQARLLVLEAADQLDRHGNKKARGILAMAKVAAPNMA
LKVLDMAMQVHGAAGVSSDTVLSHLWATARTLRIADGPDEVHLGTIAKLELQRARL

Transcript Sequence

Transcript ID

OQU90466
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:76316326:76322556:1 gene:SORBI_3002G415900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGACTGGGCTTCCGCGGGAGCGGGATCAGAGAGATGACACGACGCAACGCAACCGATCCC
GATCCGATTTCCATCACGGCGGCACCGGAAGCGTGGGCGCGTCGACTTTCGACTCCCTCC
CAAACACCAAATCCGTCCACGCTGTCTCGTCTCCCCCGGTATCGCCGTCTCCTCCTCGGT
TCCTCAACCGACCCGCTGCTGCTGCTGCGATGGCGAAGCTAACATCGGAGCTGCTACGGC
CGGTGGACCCGGCGGCGGCGCTGGACGAGGCGGCGCTGCTGCGCTACCTGGCCGCCAACG
TCCCGGGCTTCCCGGGCCCCGCGCCCGCGCTGTCGCTGACCCAGTTCGGCCACGGCCAGT
CCAACCCCACCTACTGCATCCACGCCTACGCCTCCGCCCCCGGCGGGGGACCGGCTAGGC
GCTACGTGCTCAGGAAGAAGCCGCCCGGGTCCATCCTCCAGTCCGCGCACGCCGTCGAGC
GCGAGTACCAGGTTCTCAAAGCTCTGGGTGATCACACAGATGTTCCTGTCCCGAAGGTTT
ATTGTCTATGCACAGATGCAAGTGTAATTGGAACTCCTTTCTATGTAATGGAGTATCTGG
AAGGAATAATATATCCTGATAGCGCGTTGCCGGGGGTGACTCCATCTAAAAGGCGAGCTA
TATATTTTTATACTGCCAAAACTTTGGCTGCTATACACAAAGTTGATGTTGATGCCATTG
GATTGCAGAAGTATGGGAGAAGAGACAATTATTGCAAAAGACAAGTACAAAGATGGGAGA
GGCAATATCTTGCATCCACTGGTGAAGGGAAGCCTGCACGTTATCAGAGGATGCTTGATC
TAGCTCGTTGGTTGAAAGAACATGTACCAAAAGAAGATTCCTCAGCAGGATCGGGAACAG
GTCTTGTTCATGGTGATTACCGCCCTGATAATCTAGTTTTTCATCCAACAGAGGATCGAG
TAATTGGCGTTATTGACTGGGAACTATCTACTTTGGGAAATCAGATGTGTGATGTTGCTT
ATAGCTGCTTGCCATATATTATTGATGCATCTATCAGTGAAAGGACTTCTTATGGAGGGT
TTCAAGATAATGGCATTCCAGATGGGATTCCTCAACTGGAAGAGTACCTTTCCGTATACT
GCTCTTTCTCTGCGAGACCCTGGCCTGCTGCAAATTGGAAATTCTACATTGCTTTTTCTT
TGTTTCGTGGGGCCTCTATCTATGCAGGAGTATATCACAGATGGACTATGGGTAATGCTT
CAGGTGGTGAGCGCGCTAAATTTGCTGGCAAGGTTGCTAATGCTATGGTTGACTGCGCCT
GGGACTTCATAAATAGAGTAAATGTCCTGCAAGAACCACCTTCTAAGGGTTTTCAAGTCT
CACCAGCACCGTGGCAAGAATTTCACAGAGAGGAAGAAAGTTCAACATCTGAAAAGAATC
AAGGCAAATTTGTTCCTAGTGAAAAGGTTATGCAGCTTCGAAAGAAACTAATAAAATTTA
TCGAAGATCACATATACCCTATGGAGGGTGAGTTCTACAAACATGCACAATCAACCTCAA
GATGGACAATTCATCCAGAAGAAGAAAATCTTAAAGCATTGGCAAAGAAGGAGGGCCTAT
GGAACTTGTTTATTCCGCTAGACAGTGCAGCTAGAGCTAGAAAGCTACTGTTGGAAGACC
ATTCTCAAATTTCCCTTGGGAGTTCGAATGATATTTTGCTAGGCGCGGGTCTTACAAATC
TTGAATATGGATATTTGTGTGAGATTATGGGACGTTCAGTTTGTGCTCCACAAATATTTA
ACTGTGGTGCTCCTGATACAGGTAACATGGAGGTCCTATTGAGGTATGGCACTAAGGAGC
AACAGAAGCAATGGCTAGTTCCTTTATTGGAAGGGACAATTCGTTCTGGATTTGCAATGA
CAGAACCACAAGTTGCATCTTCAGATGCGACAAATATAGAATGCTCAATATCCAGGCAAG
GAGATTTTTATGTGATAAATGGAAGGAAGTGGTGGACCAGTGGAGCCATGGATCCTAGGT
GCAAAATCCTGATATTAATGGGAAAGACAGATTTTTCTGCACCTAAGCATAAGCAACAGT
CCATGATTTTAGTGGACATCAACACTCCTGGGGTGCAGATAAAGAGACCATTGCTAGTCT
TTGGTTTTGATGATGCACCTCATGGACACGCAGAGATTACATTTGAAAATGTGCGTGTTC
CAGTAACAAATATCCTGCTGGGAGAAGGACGGGGTTTTGAGATTGCTCAAGGAAGACTTG
GTCCTGGAAGGTTACATCATTGCATGAGGCTAGTAGGGGCAGCAGAACGTGGCATGGATC
TGATGGTAGAGAGGGCCTTAAGTAGGACCGCATTTGGAAAGAGGATTGCACAGCATGGTT
CCTTTTTATCAGACCTTGCAAAGTGTCGGATTGAATTGGAGCAGGCTAGGCTTTTAGTTC
TTGAAGCGGCCGATCAACTCGATCGGCATGGGAACAAGAAAGCTCGTGGTATCCTCGCGA
TGGCCAAGGTGGCAGCTCCAAATATGGCCCTGAAGGTGCTTGACATGGCGATGCAAGTTC
ATGGTGCAGCTGGTGTCTCATCGGACACGGTCCTGTCGCACCTGTGGGCAACGGCTAGGA
CACTGCGGATCGCAGACGGTCCCGACGAAGTACATCTCGGGACAATCGCTAAGCTGGAGC
TGCAGAGGGCTCGGTTGTAACTTGAGGGGGAAGTACAGTTGTTTAGGAGAATAAATGGAC
ATGGACCTGTTTGCAAGGTTAAGGGATGGCAGGCAGCACGAGCACATCGCTGGCACATAG
ATAATGAGTAAATAATGGCGTTGTATATTCATCAATGTACGATGTTGTACACTTGTATTC
TCTGTGGTACTTAACCATGTCAACGGCCGGCATTAGATACTATGAGCCCACAAAACCAAA
TCAGACTCCAATGTTTGATCCGAATGATGGATGTACAGTGATTAACTGGCCGTAAAACCT
GTAATGAGTGTTAAGAATGTATGTGCTTTTCTTGTACATCAGAGAAAGAATCAGAGCTTA
ACAAGCAG