Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90392
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:75147138:75150057:1 gene:SORBI_3002G400600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCAGAGTACCGTGAAGCTCGCGGTGCTCGCTCTACTGCTAGCGGCAGCAGCTCACCAC
GGTCTGCTGCCGCTGCCGACGGCGCTATGCTACTGGCTCAACCCAGAGATCTACGACGCC
GGCGGGCTGAGCCGCCGCGCGTTCCCGGAGGGCTTCGTCTTCGGGACGGCCGCGTCGGCG
TACCAGGTCGAGGGGATGGCCAAGCACGGGGGCCGGGGCCCCAGCATCTGGGACGCCTTC
ATAGAGGTACCCGGGACCATCCCTAACAATGCCACCGCTGATGTGACGGTCGACGAGTAT
CATCGGTACAAGGAAGATGTGAACATAATGAAGAACATGGGCTTTGATGCGTACCGGTTT
TCAATTTCTTGGTCGAGGATTTTCCCAAATGGAACTGGCAAGGTGAACCAGGAAGGAGTG
GATTACTATAACAGGCTCATAGATTACATGCTTCAGCAAGGTATCACGCCGTATGCAAAT
CTCTACCATTATGACCTCCCATTGGCACTCCATGAACAGTACTTGGGCTGGCTTAGCCCA
AAGATTGTGGAGGCGTTTGCAGACTACGCCGAGTTCTGCTTCCAGACGTTCGGAGACAGG
GTGAAGAACTGGTTTACCTTCAACGAGCCGAGGTGCGTCGCTGCTCTTGGCTACGACAAT
GGCTTACACGCACCGGGAAGGTGTTCCGAGTGCGCTGCCGGAGGCAACTCCACGACGGAG
CCGTACCTTGCTGCACACCATCTCATCCTTTCTCATGCAGCTGCGGTGAGGCGATACCGC
GACAAGTATCAGCTTTACCAAAAGGGGAGGATTGGAATTCTCTTGGATTTCGTGTGGTAT
GAACCTTTCAGCGACAGCAATGCTGACCAGGCTGCAGCACAGCGAGCCAGGGACTTCCAC
CTAGGCTGGTTCCTTGATCCCATAATAAATGGACGGTATCCGTACTCGATGCAAGAGATT
GTTAAAGATAGGCTGCCGTTGTTCAGTGATGAAGAATCCAGGATGGTGAAAGGCTCTATA
GACTACGTTGGCATCAACCACTACACTTCTTTCTACATGAAGGACCCTGGGACATGGAAC
CTGACGCCAGTCAGCTACCAGGATGATTGGCATGTTGGTTTCGTCTATGAGCGAAACAGC
ATTCCTATTGGCGCTCATGCAAACTCCTATTGGCTGTACATTGTGCCGTGGGGAATCAAC
AAGGCTGTCAACTATGTCAAGGAAACTTATGAAAATCCTACAATGATCCTTGCTGAAAAT
GGAATGGACCAACCTGGTGATATCAGTATTACTCAGGGTGTGCATGACACAATAAGGATC
CGTTACTACAGAGACTACATAACTGAGCTGAAGAAGGCAATAGACGATGGTGCCAGAGTC
ATCGGTTACTTTGCGTGGTCGCTGCTCGACAACTTCGAGTGGAGGCTTGGGTACACTTCG
CGGTTTGGCTTGGTCTACGTGGACTACAAGACTTTGAAGAGGTACCCCAAGGACTCTGCT
TTCTGGTTCAAGCATATGCTCTCAAAGAAGAGGAGCTAG

Peptide Sequence

PEP ID

OQU90392
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:75147138:75150057:1 gene:SORBI_3002G400600 transcript:OQU90392 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MQSTVKLAVLALLLAAAAHHGLLPLPTALCYWLNPEIYDAGGLSRRAFPEGFVFGTAASA
YQVEGMAKHGGRGPSIWDAFIEVPGTIPNNATADVTVDEYHRYKEDVNIMKNMGFDAYRF
SISWSRIFPNGTGKVNQEGVDYYNRLIDYMLQQGITPYANLYHYDLPLALHEQYLGWLSP
KIVEAFADYAEFCFQTFGDRVKNWFTFNEPRCVAALGYDNGLHAPGRCSECAAGGNSTTE
PYLAAHHLILSHAAAVRRYRDKYQLYQKGRIGILLDFVWYEPFSDSNADQAAAQRARDFH
LGWFLDPIINGRYPYSMQEIVKDRLPLFSDEESRMVKGSIDYVGINHYTSFYMKDPGTWN
LTPVSYQDDWHVGFVYERNSIPIGAHANSYWLYIVPWGINKAVNYVKETYENPTMILAEN
GMDQPGDISITQGVHDTIRIRYYRDYITELKKAIDDGARVIGYFAWSLLDNFEWRLGYTS
RFGLVYVDYKTLKRYPKDSAFWFKHMLSKKRS

Transcript Sequence

Transcript ID

OQU90392
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:75147138:75150057:1 gene:SORBI_3002G400600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GCATGTGGAACAAATAACAGGAACAGGCAAAGGCTCTCACCCTCCGTCCCTCCCTCTTTT
AAAGATACCTTCGGAAAGCACGGCCTTTGCTGCTTCCACTGGGACCATGCAGAGTACCGT
GAAGCTCGCGGTGCTCGCTCTACTGCTAGCGGCAGCAGCTCACCACGGTCTGCTGCCGCT
GCCGACGGCGCTATGCTACTGGCTCAACCCAGAGATCTACGACGCCGGCGGGCTGAGCCG
CCGCGCGTTCCCGGAGGGCTTCGTCTTCGGGACGGCCGCGTCGGCGTACCAGGTCGAGGG
GATGGCCAAGCACGGGGGCCGGGGCCCCAGCATCTGGGACGCCTTCATAGAGGTACCCGG
GACCATCCCTAACAATGCCACCGCTGATGTGACGGTCGACGAGTATCATCGGTACAAGGA
AGATGTGAACATAATGAAGAACATGGGCTTTGATGCGTACCGGTTTTCAATTTCTTGGTC
GAGGATTTTCCCAAATGGAACTGGCAAGGTGAACCAGGAAGGAGTGGATTACTATAACAG
GCTCATAGATTACATGCTTCAGCAAGGTATCACGCCGTATGCAAATCTCTACCATTATGA
CCTCCCATTGGCACTCCATGAACAGTACTTGGGCTGGCTTAGCCCAAAGATTGTGGAGGC
GTTTGCAGACTACGCCGAGTTCTGCTTCCAGACGTTCGGAGACAGGGTGAAGAACTGGTT
TACCTTCAACGAGCCGAGGTGCGTCGCTGCTCTTGGCTACGACAATGGCTTACACGCACC
GGGAAGGTGTTCCGAGTGCGCTGCCGGAGGCAACTCCACGACGGAGCCGTACCTTGCTGC
ACACCATCTCATCCTTTCTCATGCAGCTGCGGTGAGGCGATACCGCGACAAGTATCAGCT
TTACCAAAAGGGGAGGATTGGAATTCTCTTGGATTTCGTGTGGTATGAACCTTTCAGCGA
CAGCAATGCTGACCAGGCTGCAGCACAGCGAGCCAGGGACTTCCACCTAGGCTGGTTCCT
TGATCCCATAATAAATGGACGGTATCCGTACTCGATGCAAGAGATTGTTAAAGATAGGCT
GCCGTTGTTCAGTGATGAAGAATCCAGGATGGTGAAAGGCTCTATAGACTACGTTGGCAT
CAACCACTACACTTCTTTCTACATGAAGGACCCTGGGACATGGAACCTGACGCCAGTCAG
CTACCAGGATGATTGGCATGTTGGTTTCGTCTATGAGCGAAACAGCATTCCTATTGGCGC
TCATGCAAACTCCTATTGGCTGTACATTGTGCCGTGGGGAATCAACAAGGCTGTCAACTA
TGTCAAGGAAACTTATGAAAATCCTACAATGATCCTTGCTGAAAATGGAATGGACCAACC
TGGTGATATCAGTATTACTCAGGGTGTGCATGACACAATAAGGATCCGTTACTACAGAGA
CTACATAACTGAGCTGAAGAAGGCAATAGACGATGGTGCCAGAGTCATCGGTTACTTTGC
GTGGTCGCTGCTCGACAACTTCGAGTGGAGGCTTGGGTACACTTCGCGGTTTGGCTTGGT
CTACGTGGACTACAAGACTTTGAAGAGGTACCCCAAGGACTCTGCTTTCTGGTTCAAGCA
TATGCTCTCAAAGAAGAGGAGCTAGAATTGCAGATAAGGGGACCAATGGCTTCAGGTGTC
ATACAAAGTTCACTCTGCATATCCTCTTAGTATGTCAGATTTAGCTTAAGAGACCATGCA
GATGATTGAGTCTCAAGACTCGACAACTCTAGCTCTGTTAATTGTTGCAAGGCAATAAAT
TGGTATCT