Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90374
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:74984248:74988503:-1 gene:SORBI_3002G398600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAGGCGCTGTGGTGGCGGCCGCGCCGGCTGGAGCGCCACTTCGCGCGCCACGGCGTC
CGCGGGCCGGGCTACCGCTTCTTCTTCGGCAGCTCCATCGAGCTCATCCGCCTCATGCTG
GACGCCTCCTCCCGCCCAGCGCCACCCGAAGCGCCGCACGACGTCCTCCCCAGGGTGCTC
GCCTTCTACCACCATTGGAGGAAGCTCTACGGTCCAATGCATCTGATTTGGTTCGGGAGG
ACGCCGCGTCTGGTCGTGAGCTCGCCGGAGCTGATCCGGGAGGTGCTGCTGTCGCGATCG
GAGCATTTCGACCGGTACGAGGCGCACCCGCTGATCCGCCAGTTCGAGGGCCTCGGCCTC
AGCAACCTCCACGGCGACGAGTGGGCGCGCCGCCGCAAGATCCTCACGCCCGCCTTCAAC
GCCGAAAACCTCAAGCTGCTCGCGCCCTTCGTCGCCGACACGGTGCAGCGGATGCTGGAG
GAGCGCGTGCTGCTACCGTCGTCGTCGGCGGCGGGCGGGTCCGGCGAGGTGGAGGTGGAC
GTGGTTGAGTGGTACCAGCGGCTGCCGAAGGAGGCCATCACCGTCGCCACGTTCGGCCGC
AACAGCGACGAGGGCAGCGCCGTGTTCCGGCTGCAGGCCGAACACGCCAGCTACGCCACC
GAGGCGCACAGCAAGGTCTTCATCCCGGGCTACAGGTTCCTGCCCACCAGGAGGAACAGG
CGCGTGTGGCAGCTCGACAGGGAGATCAGGAGACTCCTGGCTAAGCTCGTCGCCGGCCTG
CAGAGCGGCGACGACCACCGACACCGGGGCCGGGACCCGCGCGCCGGCGGCATGAGGAAC
TTCATGAGCTTCATGGCCCCGGCCATGACGGCGGACGAGATCATCGAGGAGTCCAAGAAC
TTCTTCTTCGCCGGGCTGGAGACGCTGAACAGCCTCCTCACCTGGGCCACCGTCGCGCTC
GCCATGCACCCGGAGTGGCAGGACCGTGCTCGCCGGGAGGTCGTCGACGTCTGCGGCCGC
CGGGGCGTCCCCACCAAGGACCACCTCCCCAGGCTCAGGACGCTCGGGATGGTCGTCAAC
GAGACGCTCAGGCTCTACCCGCCGGCGGTGGCCATGATCCGGAAGGCGAAGCGGGACGTG
GAGCTCGGCGGCTGCGTGGTGCCGGCGGGCACGGAGGTCATGATTCCCATCATGGCCGTG
CACCACGACGCCGACGTGTGGGGCACCGACGCCACGAAGTTCAACCCCGGGCGCTTCGCG
GGCGACGGCGGCGACCGCCAGCCGCGGCCGCAGATGGCGTTCATGCCGTTCGGCGGCGGC
GCGCGGGTGTGCATCGGCCAGTACCTGGCGCTCATGGAGGCCAAGATCGCCTTGGCCATG
GTGCTTCAGCGCTGCGAGTTCCGGCTGTCGCCGGCGTACGTGCACGCGCCGAGGGTGCTC
ATGATACTCAACCCGCAGCACGGCGCGCCGGTCATCTTCCGGCCGTTGTGA

Peptide Sequence

PEP ID

OQU90374
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:74984248:74988503:-1 gene:SORBI_3002G398600 transcript:OQU90374 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEALWWRPRRLERHFARHGVRGPGYRFFFGSSIELIRLMLDASSRPAPPEAPHDVLPRVL
AFYHHWRKLYGPMHLIWFGRTPRLVVSSPELIREVLLSRSEHFDRYEAHPLIRQFEGLGL
SNLHGDEWARRRKILTPAFNAENLKLLAPFVADTVQRMLEERVLLPSSSAAGGSGEVEVD
VVEWYQRLPKEAITVATFGRNSDEGSAVFRLQAEHASYATEAHSKVFIPGYRFLPTRRNR
RVWQLDREIRRLLAKLVAGLQSGDDHRHRGRDPRAGGMRNFMSFMAPAMTADEIIEESKN
FFFAGLETLNSLLTWATVALAMHPEWQDRARREVVDVCGRRGVPTKDHLPRLRTLGMVVN
ETLRLYPPAVAMIRKAKRDVELGGCVVPAGTEVMIPIMAVHHDADVWGTDATKFNPGRFA
GDGGDRQPRPQMAFMPFGGGARVCIGQYLALMEAKIALAMVLQRCEFRLSPAYVHAPRVL
MILNPQHGAPVIFRPL

Transcript Sequence

Transcript ID

OQU90374
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:74984248:74988503:-1 gene:SORBI_3002G398600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACCTAGCCGTGGCGCGGCTCATGGAGGCGCTGTGGTGGCGGCCGCGCCGGCTGGAGCGCC
ACTTCGCGCGCCACGGCGTCCGCGGGCCGGGCTACCGCTTCTTCTTCGGCAGCTCCATCG
AGCTCATCCGCCTCATGCTGGACGCCTCCTCCCGCCCAGCGCCACCCGAAGCGCCGCACG
ACGTCCTCCCCAGGGTGCTCGCCTTCTACCACCATTGGAGGAAGCTCTACGGTCCAATGC
ATCTGATTTGGTTCGGGAGGACGCCGCGTCTGGTCGTGAGCTCGCCGGAGCTGATCCGGG
AGGTGCTGCTGTCGCGATCGGAGCATTTCGACCGGTACGAGGCGCACCCGCTGATCCGCC
AGTTCGAGGGCCTCGGCCTCAGCAACCTCCACGGCGACGAGTGGGCGCGCCGCCGCAAGA
TCCTCACGCCCGCCTTCAACGCCGAAAACCTCAAGCTGCTCGCGCCCTTCGTCGCCGACA
CGGTGCAGCGGATGCTGGAGGAGCGCGTGCTGCTACCGTCGTCGTCGGCGGCGGGCGGGT
CCGGCGAGGTGGAGGTGGACGTGGTTGAGTGGTACCAGCGGCTGCCGAAGGAGGCCATCA
CCGTCGCCACGTTCGGCCGCAACAGCGACGAGGGCAGCGCCGTGTTCCGGCTGCAGGCCG
AACACGCCAGCTACGCCACCGAGGCGCACAGCAAGGTCTTCATCCCGGGCTACAGGTTCC
TGCCCACCAGGAGGAACAGGCGCGTGTGGCAGCTCGACAGGGAGATCAGGAGACTCCTGG
CTAAGCTCGTCGCCGGCCTGCAGAGCGGCGACGACCACCGACACCGGGGCCGGGACCCGC
GCGCCGGCGGCATGAGGAACTTCATGAGCTTCATGGCCCCGGCCATGACGGCGGACGAGA
TCATCGAGGAGTCCAAGAACTTCTTCTTCGCCGGGCTGGAGACGCTGAACAGCCTCCTCA
CCTGGGCCACCGTCGCGCTCGCCATGCACCCGGAGTGGCAGGACCGTGCTCGCCGGGAGG
TCGTCGACGTCTGCGGCCGCCGGGGCGTCCCCACCAAGGACCACCTCCCCAGGCTCAGGA
CGCTCGGGATGGTCGTCAACGAGACGCTCAGGCTCTACCCGCCGGCGGTGGCCATGATCC
GGAAGGCGAAGCGGGACGTGGAGCTCGGCGGCTGCGTGGTGCCGGCGGGCACGGAGGTCA
TGATTCCCATCATGGCCGTGCACCACGACGCCGACGTGTGGGGCACCGACGCCACGAAGT
TCAACCCCGGGCGCTTCGCGGGCGACGGCGGCGACCGCCAGCCGCGGCCGCAGATGGCGT
TCATGCCGTTCGGCGGCGGCGCGCGGGTGTGCATCGGCCAGTACCTGGCGCTCATGGAGG
CCAAGATCGCCTTGGCCATGGTGCTTCAGCGCTGCGAGTTCCGGCTGTCGCCGGCGTACG
TGCACGCGCCGAGGGTGCTCATGATACTCAACCCGCAGCACGGCGCGCCGGTCATCTTCC
GGCCGTTGTGACACGTCATTCCAGCCAGACATCTCGCAGCTCCGCTCAGAAATCCAAACC
GATCGGATTCAATTCATTCCTTCCTTCCTGTAAATTATCACCCCCATTACCAATTGCAAA
TATATAAAGTATACCATACGTGACAGGTATCAGATATAGAAAGGATAGAAAAAAAAAGTT
TCTAGATGTTATTTTTCACTCTTATTCGTATACGTATTTGACCTTGAGAATTTGAGCTGT
ATAGTGTGTCCTGTGCTCTGAATCTCACGCAAAAGTTGCCAAGAATTTGCAAACGTTACG
TTAGGCATCAAAATTCAAAATATACTACATGACAAGTGAACCCAGTTCAAATGCCAGACA
CTCTCAGCCAATTCGTAATGGTATCAACACCACACCATAATGCAGATTATTCCTGTTACG
AATTCTGCTACCAGTGTATCGGCATCACGTCAACAAATTTCTGATAGGAATGCTAAGTGT
TCTCACGGAGAATGCAATTTGTGGCCAAACTTTTTCCATATATGAAAGACAAGCTCTATA
CAGGGCAGCATATTACACAGGAAGGATGTCTTCAAAATATTGAGGGGACAAAGGGGTAGA
CTTTTCCTCAACATCAGCATCAAGGATATGTTTGAATTTCCTGAGGGTTTATACGGACAA
CCGCACAAGCTTCTCGATCTCTTTGATAATTAGATCTCTC