Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90358
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:74721969:74726618:1 gene:SORBI_3002G394500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGACTCGATCTTCGACTATCGATTTTGGTCGGAGGAAGCAGAGCGAGCTCTTCGGGTCA
GGGCCACTGCGTCCAGCAAACATCATCAGGAATAAGTTCCCTACCTACAAGAATGGTTCA
AACGGGATTGTTATCAAATTGGTGGATGCCCCAGAAATGCCATCTCTTAAGGAGGCTGTT
GCCAAGGAGACAACTGATTTGCTTGATAGGTGTCAGCGCCTTTCAGTCCGTGAGCTCACC
ATGAAATTCGAGAAGGGCTTTAACACAGCTACCTTGTTGTCTAATGAGGCTAAATGGAGA
CATGCGGCTTTATTGGAGCGAGACATCCTTCTAAAGAATCTTAAAAGCGTATTGGAATCA
TTGAGAGGTCGAGTAGGGGGCAAAAATAAAGATGAAATTGAGGAGTCTCTATCTATGGTG
GATATTTTAGCAGTTGAGCTATCCAAAAGAGAAGATGAGTTGCTTCAGCAAAAAACAGAG
ATCACCAAAATTGCAGCCACATTGAAACTGGCTTCTAAAGATGCCAAGAGAATTGTTGAT
GAAGAAAGAGCTAATGCTCGGTTGGAGATAGAAAGTGCTAAAGCTGCTGTACATAAAATT
CAATTAGCACTTAAAGAGCAGGAAAATTTTTATCAAAGAACTGGGAAGCAGGATGTTGAT
GAACTGAAGGAAGAAGTTCAAGAAGCACGGAGAGTGAAAATGCTGCATTGCCCAAGCAAG
GCAATGGACATCGAGAACGAGATCCAAGTTCTACGTGACCAACTGTCTGAAAAATCTTCA
ACTTCTCTTCACCTTTTGAAAGAGTTGGAGCTGCATCGAAGTTACGAGGAAAATGCCATG
CCCTTGTGTGAATTAAAGGGTCTAGAAACCTTAGGTTCAATGTTACGCATAGTTGTTCAA
GATTGTGCACATGTAGATTTTTCAAATTGTTCAATCCAGTGGTTTCGCATACAACCTGAA
GGAAGCAATCAAGAAATTATTTCAGGTGCCACAAAGCCAGTATATGCTCCAGAACCACAT
GACGTGGGGCGTTACATCCAAGCTGAAATCAAATTCGGTGGTCAAATCTCAATCGCAAAG
ACTGCTGGTCCAATAGATCCTGCTCCAGGATTGGTTGATTATGTAGAGGCTCTTGTGAGG
AATCCTGAAACTGATTATAATGTAGTTATTCTTCAAGTGAATGGAATTGCTCAGGCTGCA
GATTCTTTACATGTTCTTTGTATTGGGAGATTGCGGATGAGGCTTGCTAAAGAAAAGGCA
GTCGTTGCGAAGGAGTTCTATTCGTCGTCAATGCAGTTGTGTGGCGTTAGAGGAGGTGGA
GACGCTGCTCCCCAAGCGATCTTCTGGCAACCAAGAAAGGATCTCAGCTTTGTGCTGGCC
TTTGAAACAACCAGAGAGCGCAACTCGGCACTCATGCTGGCCCGGAGATTCGCGATCGAT
TGCAATATCATCCTTACTGGTCCAGGGGATAAAACTCCAGCGCACTCTGAAACCTGA

Peptide Sequence

PEP ID

OQU90358
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:74721969:74726618:1 gene:SORBI_3002G394500 transcript:OQU90358 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MTRSSTIDFGRRKQSELFGSGPLRPANIIRNKFPTYKNGSNGIVIKLVDAPEMPSLKEAV
AKETTDLLDRCQRLSVRELTMKFEKGFNTATLLSNEAKWRHAALLERDILLKNLKSVLES
LRGRVGGKNKDEIEESLSMVDILAVELSKREDELLQQKTEITKIAATLKLASKDAKRIVD
EERANARLEIESAKAAVHKIQLALKEQENFYQRTGKQDVDELKEEVQEARRVKMLHCPSK
AMDIENEIQVLRDQLSEKSSTSLHLLKELELHRSYEENAMPLCELKGLETLGSMLRIVVQ
DCAHVDFSNCSIQWFRIQPEGSNQEIISGATKPVYAPEPHDVGRYIQAEIKFGGQISIAK
TAGPIDPAPGLVDYVEALVRNPETDYNVVILQVNGIAQAADSLHVLCIGRLRMRLAKEKA
VVAKEFYSSSMQLCGVRGGGDAAPQAIFWQPRKDLSFVLAFETTRERNSALMLARRFAID
CNIILTGPGDKTPAHSET

Transcript Sequence

Transcript ID

OQU90358
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:74721969:74726618:1 gene:SORBI_3002G394500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGATCCGATTTTTCGTATGAAGCTGTGGATCCATTAGGTGTCCGCAAGTCGAGTATATTT
GTTTGTTTTTTGCGAGTGTAAAAATGGTCAACGCGTTTCACTGAAGGTTGTGTGTTTTAC
TTTGAGAATAGATACCAACACGTGTTTGTTCGTCCTCGTCTTGGTTTTGCTTCAAGACTG
TTACCGCCGTCGCTGCTGTATGCCAAAATCTCGCTATCAACCATCCCAATAGTCCCTTTT
CTGGTTTAATCAACAACAAACCCATGTTCCGGTACTGGCTACTCAACTGTACAGACAAGT
CCTCCCTATTTCGTGGACAAGCTTGCACTCGCTGGTCCTGCTGTCATAACTGTCCTTTTG
AGTGGAATTCAAGGCACTCATGTTTAGTACTACTGCCCGGTTCTCCTGAACTAAATTGCT
TCCGCTGTGGATTTGTATTCCTGTGTTAGTGGGTGAGTGCTGGGCAACACTTCCATTTTG
ATGCGAGTCTTTACTCTTGCATCTCATAAGGGTCGGTAGTTGTCTGCTAGCACAAGCATT
CAGCTATACGTGTGTACGTTGTAATTGCTCTTCCGGCTTTCCCCGCCTTATGTTTTCTCT
CAGGTTCCGCGATGCAATTTTATTTTCCCTGTTAGGGTTTTAGCTATTTCATGGATGGTA
CTTTTAAATGCGGCTAATTGCTATTTTGGTTCACTAGGTCTCACTTTTCTGGAGTCAGGG
CCGAGGATTTCTCGTAGATGACTCGATCTTCGACTATCGATTTTGGTCGGAGGAAGCAGA
GCGAGCTCTTCGGGTCAGGGCCACTGCGTCCAGCAAACATCATCAGGAATAAGTTCCCTA
CCTACAAGAATGGTTCAAACGGGATTGTTATCAAATTGGTGGATGCCCCAGAAATGCCAT
CTCTTAAGGAGGCTGTTGCCAAGGAGACAACTGATTTGCTTGATAGGTGTCAGCGCCTTT
CAGTCCGTGAGCTCACCATGAAATTCGAGAAGGGCTTTAACACAGCTACCTTGTTGTCTA
ATGAGGCTAAATGGAGACATGCGGCTTTATTGGAGCGAGACATCCTTCTAAAGAATCTTA
AAAGCGTATTGGAATCATTGAGAGGTCGAGTAGGGGGCAAAAATAAAGATGAAATTGAGG
AGTCTCTATCTATGGTGGATATTTTAGCAGTTGAGCTATCCAAAAGAGAAGATGAGTTGC
TTCAGCAAAAAACAGAGATCACCAAAATTGCAGCCACATTGAAACTGGCTTCTAAAGATG
CCAAGAGAATTGTTGATGAAGAAAGAGCTAATGCTCGGTTGGAGATAGAAAGTGCTAAAG
CTGCTGTACATAAAATTCAATTAGCACTTAAAGAGCAGGAAAATTTTTATCAAAGAACTG
GGAAGCAGGATGTTGATGAACTGAAGGAAGAAGTTCAAGAAGCACGGAGAGTGAAAATGC
TGCATTGCCCAAGCAAGGCAATGGACATCGAGAACGAGATCCAAGTTCTACGTGACCAAC
TGTCTGAAAAATCTTCAACTTCTCTTCACCTTTTGAAAGAGTTGGAGCTGCATCGAAGTT
ACGAGGAAAATGCCATGCCCTTGTGTGAATTAAAGGGTCTAGAAACCTTAGGTTCAATGT
TACGCATAGTTGTTCAAGATTGTGCACATGTAGATTTTTCAAATTGTTCAATCCAGTGGT
TTCGCATACAACCTGAAGGAAGCAATCAAGAAATTATTTCAGGTGCCACAAAGCCAGTAT
ATGCTCCAGAACCACATGACGTGGGGCGTTACATCCAAGCTGAAATCAAATTCGGTGGTC
AAATCTCAATCGCAAAGACTGCTGGTCCAATAGATCCTGCTCCAGGATTGGTTGATTATG
TAGAGGCTCTTGTGAGGAATCCTGAAACTGATTATAATGTAGTTATTCTTCAAGTGAATG
GAATTGCTCAGGCTGCAGATTCTTTACATGTTCTTTGTATTGGGAGATTGCGGATGAGGC
TTGCTAAAGAAAAGGCAGTCGTTGCGAAGGAGTTCTATTCGTCGTCAATGCAGTTGTGTG
GCGTTAGAGGAGGTGGAGACGCTGCTCCCCAAGCGATCTTCTGGCAACCAAGAAAGGATC
TCAGCTTTGTGCTGGCCTTTGAAACAACCAGAGAGCGCAACTCGGCACTCATGCTGGCCC
GGAGATTCGCGATCGATTGCAATATCATCCTTACTGGTCCAGGGGATAAAACTCCAGCGC
ACTCTGAAACCTGAAGTCTGACCCTTTCTTGAATGTACATCTCTGCACATGCAGTAGTTA
GATATCTCATCTGATCTCTGAGTAATTGAGTTCAGTTTAGCAGTAGTATACCTAAGTGCC
AGGCATTGACACCGATTCATTTTTCAGTGTAGGACTCGTTACATTTGTACTCGCTATTCC
ACAACGCCAACGGTCGAGTAGGAAACGCTTCCGGCTGACAGAAAATAAAGTATATAGTAG
CGAAAAGAAAGGATCAATCCGCTTGCGTTTAGGTCTTGTCCCGTTGTTTTTGCCTTCTCG
GCTCCTGGGGCGGCCGAACGGTTCGGATCTATTGGCGGTGCTGCACGTGAAGATCTACAT
CACATCTTCGACGTCACCGCCTGCAAGACCTACGGCCAGGGGGGACGGGAACGAGGCAGC
AGTACGTCGATCGTCTCGTCGGCTTGTAGACGTG