Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90316
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:74047361:74052075:1 gene:SORBI_3002G385800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGTGATGTCGGTGATGCTGGTGGTGGAGGCCGTGTACAACAGCGTCGTCAGCCTCGGC
GTCAAGGCCATTGGGTGGCGGCCTGAGTGGAGGTTCAAGTGGAAGCCCCTCGACGGCGCC
GACGAGGAGAAGGGGAGCGCCCACTTCCCTATGGTCCTAGTCCAGATACCCATGTACAAT
GAGCTGGAGGTGTACAAGCTGTCAATAGCGGCAGCATGTGGGCTGCAGTGGCCAAAGGAC
AGGATAATGGTTCAAGTGCTGGACGATTCCACTGACCCCTTTATCAAGAATTTGGTGGAG
CTTGAATGTGAGCACTGGGCGAACAAAGGCGTCAATATTAAGTATGCCACAAGAACCAGC
CGCAAGGGGTTCAAGGCAGGGGCTCTGAAGAAAGGAATGGAATGTGACTATGCAAGGCAA
AGCGAATACATTGCCATATTTGATGCTGATTTCCAGCCTGAACCAGATTTTCTGCTCCGA
ACTGTCCCATTCCTTCTGCACAATCCCGAAGTTGCACTTGTTCAAGCTCGGTGGTCCTTT
GTGAATGGCACCACAAGCCTGCTGACAAGGGTACAGAAGATGTTTTACGACTACCACTTC
AAAGTTGAACAAGAAGCGGGATCAGCAACCTTTGCCTTCTTCAGTTTCAATGGAACTGCT
GGAGTGTGGCGTACCATAGCCATAAGAGATGCAGGAGGTTGGAAGGACCGAACTACAGTT
GAAGACATGGACTTGGCAGTTCGAGCAACCCTAAAGGGCTGGAAATTTGTATATGTTGGG
GACATTAGGGTCAAGAGTGAACTGCCGTCCACTTACAAGGCCTACTGTCGGCAGCAATTC
CGGTGGTCTAGTGGTGGTGCAAACTTATTCCGTAAGATGGCAAAGGATGTTTTGTTTGCC
AAGGACATATCACTCGTCAAGAAAATCCATATGCTCTATAGCTTCTTCTTTGTGAGGAGA
GTTGTAGCGCCAACGGCTGCCTGTATTCTCTTCAATGTCATAATCCCCATCTCAGTCACA
GTCCCGGAGCTCTACTTACCAGTGTGGGGTGTTGCCTATATTCCCATGGTGCTTACCATA
GTCACAGTTATAAGACATCCAAAAAATCTACACATAATGCCTTTTTGGATTTTGTTTGAG
AGTGTGATGACATTGCATCGCATGAGAGCTGCAGTGACTGGACTGCTGGAATTAGAAGGG
TTCAACCAGTGGACTGTGACCAAGAAGGTGGGGAATGATCTCGAGGACACTGAAGTTCCT
TTGCTTCAGAAAACCCGGAAAAGGCTAAGGGACAGAGTCAATTTCCTTGAGATTGGATTT
TCGGTGTTTCTCTTCCTCTGTGCGTCATACAACCTGGTGTTCCATGGGACAAGAAGCTAC
TACTTGTATATGTACCTTCAGGGATTAGCATTTCTGTTACTAGGGCTTAACTTCACTGGC
ACTTGTTCTTGTTGCCAATGA

Peptide Sequence

PEP ID

OQU90316
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:74047361:74052075:1 gene:SORBI_3002G385800 transcript:OQU90316 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MVMSVMLVVEAVYNSVVSLGVKAIGWRPEWRFKWKPLDGADEEKGSAHFPMVLVQIPMYN
ELEVYKLSIAAACGLQWPKDRIMVQVLDDSTDPFIKNLVELECEHWANKGVNIKYATRTS
RKGFKAGALKKGMECDYARQSEYIAIFDADFQPEPDFLLRTVPFLLHNPEVALVQARWSF
VNGTTSLLTRVQKMFYDYHFKVEQEAGSATFAFFSFNGTAGVWRTIAIRDAGGWKDRTTV
EDMDLAVRATLKGWKFVYVGDIRVKSELPSTYKAYCRQQFRWSSGGANLFRKMAKDVLFA
KDISLVKKIHMLYSFFFVRRVVAPTAACILFNVIIPISVTVPELYLPVWGVAYIPMVLTI
VTVIRHPKNLHIMPFWILFESVMTLHRMRAAVTGLLELEGFNQWTVTKKVGNDLEDTEVP
LLQKTRKRLRDRVNFLEIGFSVFLFLCASYNLVFHGTRSYYLYMYLQGLAFLLLGLNFTG
TCSCCQ

Transcript Sequence

Transcript ID

OQU90316
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:74047361:74052075:1 gene:SORBI_3002G385800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TATTTCTCTCTCCCCCACCCCTCTCGCTCGGACGGCCGCGCTACAGCTCACGTGATTTGA
CATGCCCTGCGCGGCTGCGCCCGCCGCCCGCTGGTTTTGTCCTGCTTCGTTCCGCAGCAG
GCTCGCCGCTCGACTTCCAGGGGGCGGTGTCCTGGCTCATCGGCATCCTCGATGGCACGT
CCTCCGCGGCGGCGGACGTGTACGGGGCGTGGGTGGCGGTGCGGGCCGGGCTGATCGCGC
CGGTGCTGCAGGTGGCGGTGTGGGCGTGCATGGTGATGTCGGTGATGCTGGTGGTGGAGG
CCGTGTACAACAGCGTCGTCAGCCTCGGCGTCAAGGCCATTGGGTGGCGGCCTGAGTGGA
GGTTCAAGTGGAAGCCCCTCGACGGCGCCGACGAGGAGAAGGGGAGCGCCCACTTCCCTA
TGGTCCTAGTCCAGATACCCATGTACAATGAGCTGGAGGTGTACAAGCTGTCAATAGCGG
CAGCATGTGGGCTGCAGTGGCCAAAGGACAGGATAATGGTTCAAGTGCTGGACGATTCCA
CTGACCCCTTTATCAAGAATTTGGTGGAGCTTGAATGTGAGCACTGGGCGAACAAAGGCG
TCAATATTAAGTATGCCACAAGAACCAGCCGCAAGGGGTTCAAGGCAGGGGCTCTGAAGA
AAGGAATGGAATGTGACTATGCAAGGCAAAGCGAATACATTGCCATATTTGATGCTGATT
TCCAGCCTGAACCAGATTTTCTGCTCCGAACTGTCCCATTCCTTCTGCACAATCCCGAAG
TTGCACTTGTTCAAGCTCGGTGGTCCTTTGTGAATGGCACCACAAGCCTGCTGACAAGGG
TACAGAAGATGTTTTACGACTACCACTTCAAAGTTGAACAAGAAGCGGGATCAGCAACCT
TTGCCTTCTTCAGTTTCAATGGAACTGCTGGAGTGTGGCGTACCATAGCCATAAGAGATG
CAGGAGGTTGGAAGGACCGAACTACAGTTGAAGACATGGACTTGGCAGTTCGAGCAACCC
TAAAGGGCTGGAAATTTGTATATGTTGGGGACATTAGGGTCAAGAGTGAACTGCCGTCCA
CTTACAAGGCCTACTGTCGGCAGCAATTCCGGTGGTCTAGTGGTGGTGCAAACTTATTCC
GTAAGATGGCAAAGGATGTTTTGTTTGCCAAGGACATATCACTCGTCAAGAAAATCCATA
TGCTCTATAGCTTCTTCTTTGTGAGGAGAGTTGTAGCGCCAACGGCTGCCTGTATTCTCT
TCAATGTCATAATCCCCATCTCAGTCACAGTCCCGGAGCTCTACTTACCAGTGTGGGGTG
TTGCCTATATTCCCATGGTGCTTACCATAGTCACAGTTATAAGACATCCAAAAAATCTAC
ACATAATGCCTTTTTGGATTTTGTTTGAGAGTGTGATGACATTGCATCGCATGAGAGCTG
CAGTGACTGGACTGCTGGAATTAGAAGGGTTCAACCAGTGGACTGTGACCAAGAAGGTGG
GGAATGATCTCGAGGACACTGAAGTTCCTTTGCTTCAGAAAACCCGGAAAAGGCTAAGGG
ACAGAGTCAATTTCCTTGAGATTGGATTTTCGGTGTTTCTCTTCCTCTGTGCGTCATACA
ACCTGGTGTTCCATGGGACAAGAAGCTACTACTTGTATATGTACCTTCAGGGATTAGCAT
TTCTGTTACTAGGGCTTAACTTCACTGGCACTTGTTCTTGTTGCCAATGACAGCATGTCA
AAGCTGTATGAATTGCTGATTTATAATCATTTTCTGGCATCCGTTTGTAAACGTTTCAAA
TGGTTTTGATCTTAGATGCATAGAAAGATGGCATTATTCTGCATGCTCTCAGTGATTTAG
ATCTTGTAATACAATACTGTCATCACAAAGTTACAAGGATGTGAACGTGGTGGCTGCAAT
TATCAGAAAGTGCTTTTATCGTGTATTG