Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90272
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:73413969:73418905:-1 gene:SORBI_3002G377200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCGGTAACGCGTAGGCGCGCCGCGGCGGCGGCGGCGGCGCAGGTGGTGGAGGAGGGG
CACGTTGCGCCTATCGACATATCCTCTGATTCCGAAGCGGGGTCAGAGTCAAGGTCGGAG
GATGAGGAGGATTCATTATCGGAGGAAGAGGAGGATACGAGCGATGAGGACTTTGTCGAC
ATCAGCGACAACGACAGCGAAGATGGCGAAGGAAGCGGCGTGGAAAGCGAGGAGGAATCG
GAGGCGGAGGCGGAGGCTTATGCTGAGGCTGAGGTTGAGCAATTGGGCGCGGATCGGAGC
GAGGTCGCCTGCAACAAAATCACTAGTCTCCTCAGCAGTGGGAAGAGTCTGGAGGGTTTA
AAGGTGGCGGAGTGCAAGGCGTATTTAAAGAAGATTGGTCTTAGCCAAACTGGGGGCATA
GACACTTGTGTAGACAGAATAGTGCTTCACTGGAGGTTCAAAGATGGGGATCCAGAGAGA
ATTTATCCTCGGTCATCCTTCTGTATCAACTGTAAAGGTGATGTTTGTAGGGGCGATGCC
GTCCTATTCAAACAGAAGGTGTACGAGAAGAGTGGAAAAAGGCATGCAAAATGTATAGGT
AAGCGTATAGTAGCCGGCAAAGTCGTCAAGGAAAGTTATGGTAAACAAAAGCAGCAACAC
ACTTTCACAATTCAAGTGTTTTGGAGCAAAGGAGCTGGGAAATTACCACCTTTGCATCTG
TTGCTTGTCAAAGGGCGCAACCTATACAGAATGATGACTTTTCGTCAGCCTTGGGCAAAT
GAAGTAGAAAGGCTGAAGGTTCTAGAAGAGAAGCACAACAGAGGGGACGATGCAAGGCGT
GTCCGTGCTTTGAACAGACCTAATTCTGCTGGAAACACTCTTAAAGGCAAGAAAAAATTG
GACAAAGAAAAGCACAAGTCTCGATCTGGAAGGCCTCACTGCCAATCTAATATCACTGAA
TTGGATAAAGGCAAAAAACGTCCAGCACAATCCTCTAAGTTTGATCTTCCTAATAAAAGA
TCTAAGAAAGAAGGGTCCCAAGTGCCTTCTGGAAAAGAAACCACTGGTGGTGGTAGGAGG
TCAAAGAAAAATGGTGCTCGCCAAGATAAGAGCATTTGCACTGGTTATAACAGTTCTCTA
TGCAATGAAAACAGGGAGAAGAATCATGCTACCTTTCAGAAAAAGTGTCACGTGCCTCTC
AACAAGGGTCCATCTAGCTCAAAAGTTGGGATGAACAAAAAGGCGGCTGGTTCTGGGTGC
AACAGAATTGGTGGCACACACAGTCAATTAGAAGGAAGACACATAACTCCAGCTGCCCAT
GTTGAGGCAAATCATGGAAATTTTGTTTTAGTACAGAATGTTTGTGTTGAAAGGCCCCAA
CGGCCTACTCAATTGCGTGAAGTTGCTCACGGTTTACTACCTCGCCTTGGTGGCAGCCAT
CCAGATGTGCTATCCAACGTTACAATGGGTCTCCGACATCAAATTGGAGCAATGGCTAGT
GTGCATGCACCTGCGTGTTTCAGGGGACTTCCACCCAATCAACAGAGGGTAGCATTTCCT
TCAGCTAACAGGCAACAAACTGGGTACCATCCTCATCCAGAAGAAGCATACGTTGTGCCA
CACTTCAGATATCCTAGCGGGAGTACTGGTTTCCGTAGATAA

Peptide Sequence

PEP ID

OQU90272
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:73413969:73418905:-1 gene:SORBI_3002G377200 transcript:OQU90272 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPVTRRRAAAAAAAQVVEEGHVAPIDISSDSEAGSESRSEDEEDSLSEEEEDTSDEDFVD
ISDNDSEDGEGSGVESEEESEAEAEAYAEAEVEQLGADRSEVACNKITSLLSSGKSLEGL
KVAECKAYLKKIGLSQTGGIDTCVDRIVLHWRFKDGDPERIYPRSSFCINCKGDVCRGDA
VLFKQKVYEKSGKRHAKCIGKRIVAGKVVKESYGKQKQQHTFTIQVFWSKGAGKLPPLHL
LLVKGRNLYRMMTFRQPWANEVERLKVLEEKHNRGDDARRVRALNRPNSAGNTLKGKKKL
DKEKHKSRSGRPHCQSNITELDKGKKRPAQSSKFDLPNKRSKKEGSQVPSGKETTGGGRR
SKKNGARQDKSICTGYNSSLCNENREKNHATFQKKCHVPLNKGPSSSKVGMNKKAAGSGC
NRIGGTHSQLEGRHITPAAHVEANHGNFVLVQNVCVERPQRPTQLREVAHGLLPRLGGSH
PDVLSNVTMGLRHQIGAMASVHAPACFRGLPPNQQRVAFPSANRQQTGYHPHPEEAYVVP
HFRYPSGSTGFRR

Transcript Sequence

Transcript ID

OQU90272
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:73413969:73418905:-1 gene:SORBI_3002G377200 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTTCACCACGCCGCAATCTTCCCCATTCCATTCCAAAGCGTACAGAGGGGAAGGCGGGGG
CGGGCAATCGGAGGGCGAGGAGGAGGCAAAGGCGTCTCCACTTGAGCGGCGGGATGCCGG
TAACGCGTAGGCGCGCCGCGGCGGCGGCGGCGGCGCAGGTGGTGGAGGAGGGGCACGTTG
CGCCTATCGACATATCCTCTGATTCCGAAGCGGGGTCAGAGTCAAGGTCGGAGGATGAGG
AGGATTCATTATCGGAGGAAGAGGAGGATACGAGCGATGAGGACTTTGTCGACATCAGCG
ACAACGACAGCGAAGATGGCGAAGGAAGCGGCGTGGAAAGCGAGGAGGAATCGGAGGCGG
AGGCGGAGGCTTATGCTGAGGCTGAGGTTGAGCAATTGGGCGCGGATCGGAGCGAGGTCG
CCTGCAACAAAATCACTAGTCTCCTCAGCAGTGGGAAGAGTCTGGAGGGTTTAAAGGTGG
CGGAGTGCAAGGCGTATTTAAAGAAGATTGGTCTTAGCCAAACTGGGGGCATAGACACTT
GTGTAGACAGAATAGTGCTTCACTGGAGGTTCAAAGATGGGGATCCAGAGAGAATTTATC
CTCGGTCATCCTTCTGTATCAACTGTAAAGGTGATGTTTGTAGGGGCGATGCCGTCCTAT
TCAAACAGAAGGTGTACGAGAAGAGTGGAAAAAGGCATGCAAAATGTATAGGTAAGCGTA
TAGTAGCCGGCAAAGTCGTCAAGGAAAGTTATGGTAAACAAAAGCAGCAACACACTTTCA
CAATTCAAGTGTTTTGGAGCAAAGGAGCTGGGAAATTACCACCTTTGCATCTGTTGCTTG
TCAAAGGGCGCAACCTATACAGAATGATGACTTTTCGTCAGCCTTGGGCAAATGAAGTAG
AAAGGCTGAAGGTTCTAGAAGAGAAGCACAACAGAGGGGACGATGCAAGGCGTGTCCGTG
CTTTGAACAGACCTAATTCTGCTGGAAACACTCTTAAAGGCAAGAAAAAATTGGACAAAG
AAAAGCACAAGTCTCGATCTGGAAGGCCTCACTGCCAATCTAATATCACTGAATTGGATA
AAGGCAAAAAACGTCCAGCACAATCCTCTAAGTTTGATCTTCCTAATAAAAGATCTAAGA
AAGAAGGGTCCCAAGTGCCTTCTGGAAAAGAAACCACTGGTGGTGGTAGGAGGTCAAAGA
AAAATGGTGCTCGCCAAGATAAGAGCATTTGCACTGGTTATAACAGTTCTCTATGCAATG
AAAACAGGGAGAAGAATCATGCTACCTTTCAGAAAAAGTGTCACGTGCCTCTCAACAAGG
GTCCATCTAGCTCAAAAGTTGGGATGAACAAAAAGGCGGCTGGTTCTGGGTGCAACAGAA
TTGGTGGCACACACAGTCAATTAGAAGGAAGACACATAACTCCAGCTGCCCATGTTGAGG
CAAATCATGGAAATTTTGTTTTAGTACAGAATGTTTGTGTTGAAAGGCCCCAACGGCCTA
CTCAATTGCGTGAAGTTGCTCACGGTTTACTACCTCGCCTTGGTGGCAGCCATCCAGATG
TGCTATCCAACGTTACAATGGGTCTCCGACATCAAATTGGAGCAATGGCTAGTGTGCATG
CACCTGCGTGTTTCAGGGGACTTCCACCCAATCAACAGAGGGTAGCATTTCCTTCAGCTA
ACAGGCAACAAACTGGGTACCATCCTCATCCAGAAGAAGCATACGTTGTGCCACACTTCA
GATATCCTAGCGGGAGTACTGGTTTCCGTAGATAAGACAGTCTGGTTGATGCCAGCTGCA
TTTTGATAATTGCATTGGTGGTAAGACATGTGATCTTAGTTTTCATTAATGCCATTTTAT
TGTAGCATTTGCCTCTTACCTGATGTGCAAAGGCCAGAGCATTGTTTCATCTTGTGATCT
TGAAATAATAAAGCTTCCTTCGTGTAAAAGAAAAATTCTGCACCTCAATTAACTTGATTT
TCTTTGCATTTGTGCAGAGGATGCGATGGAATACTGTGCTACCATTGACTTGATTGAGTG
ACCACTGCGATTGCCACGTGAGGGCCTATGCATAAGAATATAAGATGGATAAGAAACCAA
TATCAGGGCTTTGTATGCTTCAAACGGGAAGGTTAGGAAATATTACCGTCTTTTTGTCGA
ATGAGTTCATAGCTGGAATTGTCCTGCAAGATTGAAGCGAGATATTCCCAGAAGGGACAT
AGGTTTCTGAAATTTGAGCTAGGCCTTGTTTAGTTCCGAAAAAATTTCGGATTTCGGCAC
TGTAGCACTTTCGTTTGTTTGTGGTAAATATTATCCAATTATAGACTAACTATGGTCAAA
AGATTCGTCTCGCGATTTAGAGTCAAACTGTGTGATTAGTTTTTGTTTTCGTCTATATTT
AATGCTTCGTGCATATGCCGCAAGATTCGATGTGACATGGAATCTTGAAAACTTTTTGGG
TT