Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90217
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:72752375:72755988:1 gene:SORBI_3002G367700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCGTGGGTTAGTGAGGGACTCGGATCAGCAGCAGTCGATCAGGAGGCCGGCCGGCCAT
GGAGGAGGGAGGCGAGCACACGAGTCTTCTGGTCAAGGATTGGAATGCTTGGAGAGCATG
GCTTTTAATGGCATTGCCACAAACCTAGTCGTGTATCTCCGTTCGGTCCTCCATGGTGGT
ATTGCTTCCAGTGCATCAACAGTATCTCTTTGGTACGGGACAAGCTTCTTTGTGCCAATG
CTTGGAGCCGCCATAGCAGATACTTGCTTGGGAAATTATAAGACCATCCTGATCTCCCTT
ATCATGTACCTAATTGGAATGGTACTGATTACAGTTGCAACATTTCTGCCTTCTACTTCA
ATCTTATGCGACGCCAGCTCATGCTTGTCATCAAATGGAACTCAAACCGTGATTTTCTTT
GCTGGTTTGTATCTCACTGCTGTTGGATGTGGAGGCGTAAGATCTGCATTGCTTCCATTT
GGTGCGAGCCAGTTCAACAACGAGAACAATTTAGTAGACATAAAAAGGAGAAGAAATTTC
TTCAGTTCATTCTATATATGTGTCATCTTTGGTGTGATTACTTCTGGGACAATTATAGTT
TGGGTTCAGGAAAATGTGAGCTGGGCTATAGGATATGGAGTTGCCACTACATGCATAGGT
CTTGCTTTGATAGGATTTCTGGTGGGGACACCAATATTCCAACAAGATGAGCCTTGTGGT
TCTCCAGTGAAGAGTATTTTCCAGGTTATTGTTGCCTCTTTTAGGAACATGAGCTTGGAA
GTACCTGCTGATAGCTCTCTTCTGTATGAGGTCAGGAGCAACCACGTACAAAGGACAATA
CTTGCTCACTCCGATGATTTTAGGTTCTTAGATAAGGCAGCAGTTATTTCTGATCCAAGC
TTGGTGTATGGAGGGTGTCGAAGCTCATGGAGTTTATGTACGGTTACTGAAGTTGAGGAA
CTGAAAATACTTATCCGCTTACTCCCAATATGGGTGACTGGAATATTCTTTGCTGCTGCG
ATCTCTCAAATGCACACCACTTTCATTCAGCAGGGAGCTGTGATGAACACCAAGATTGGT
TCCCTGTCCATTCCACCAGCATCCTTGTACTCATTTGAAGTGATATGTGTCACGCTCTGG
GTACTTTCTGTGAACAAAGTGCTTGTGCCGGCAACCAGAACGTATTTTGCAAATGGAGCA
GAGCTCACACAGTTACAGAGGATTGGAATTGGTCGTTTCTTGATGATCTTTGCCATGGCA
ATGGCCGCACTTCTAGAAACCAAGAGGCTGCAGAGTGTTCAGGAGGGGGAACTGCTAAAC
ATTGTATGGCAGCTTCCACAGTACTTCGTCATTGCTGGGGCTGAGTGCTTCGCTGTCATC
ACTCAGCTAGAGTTTTTCCATGGCCAAGCGCCAGACTCCATGAAGAGCATATTAACGGCA
TTCGCGTTGCTCACCACTGCCCTTGGGAATTACTTGAGCTCAGCTATCATCACCCTCATT
GCAGGGGTGACCAGGGTATGGCATAGTCCTGGATGGATACCGGATGATCTGAACAAGGGA
CACCTTGATTACTACTACTGGTGTCTTACAGCCCTCTCGTTGGTGAATTTTGTTGTGTAT
CTGTATTTTGCTAGTAAATACAAATTGAAGAAAGTTGTTATCTGCTAA

Peptide Sequence

PEP ID

OQU90217
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:72752375:72755988:1 gene:SORBI_3002G367700 transcript:OQU90217 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MRGLVRDSDQQQSIRRPAGHGGGRRAHESSGQGLECLESMAFNGIATNLVVYLRSVLHGG
IASSASTVSLWYGTSFFVPMLGAAIADTCLGNYKTILISLIMYLIGMVLITVATFLPSTS
ILCDASSCLSSNGTQTVIFFAGLYLTAVGCGGVRSALLPFGASQFNNENNLVDIKRRRNF
FSSFYICVIFGVITSGTIIVWVQENVSWAIGYGVATTCIGLALIGFLVGTPIFQQDEPCG
SPVKSIFQVIVASFRNMSLEVPADSSLLYEVRSNHVQRTILAHSDDFRFLDKAAVISDPS
LVYGGCRSSWSLCTVTEVEELKILIRLLPIWVTGIFFAAAISQMHTTFIQQGAVMNTKIG
SLSIPPASLYSFEVICVTLWVLSVNKVLVPATRTYFANGAELTQLQRIGIGRFLMIFAMA
MAALLETKRLQSVQEGELLNIVWQLPQYFVIAGAECFAVITQLEFFHGQAPDSMKSILTA
FALLTTALGNYLSSAIITLIAGVTRVWHSPGWIPDDLNKGHLDYYYWCLTALSLVNFVVY
LYFASKYKLKKVVIC

Transcript Sequence

Transcript ID

OQU90217
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:72752375:72755988:1 gene:SORBI_3002G367700 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGCCGAATAGCCACAGTCCCACTCCCAGCGGCCCGTCCCTTTCCCCCTTCCGCGTCGCCG
TCGCCGCGATCCGGCCGAAGCAAAGTTCCCACGCACTCGTTCCTATCCCCTTGCGCCGGC
GTGGGTCGCGCAGGAAGCGGAGCTGACAGCTGAGCCACCGGTATCAGATATCCAGGCCAT
GATGATTTACGGGTCGCACTCTCACCAACCACCTTTGACCATATATTTATTAGGAATAGG
GAGGTCGGAGGCGGATGCGTGGGTTAGTGAGGGACTCGGATCAGCAGCAGTCGATCAGGA
GGCCGGCCGGCCATGGAGGAGGGAGGCGAGCACACGAGTCTTCTGGTCAAGGATTGGAAT
GCTTGGAGAGCATGGCTTTTAATGGCATTGCCACAAACCTAGTCGTGTATCTCCGTTCGG
TCCTCCATGGTGGTATTGCTTCCAGTGCATCAACAGTATCTCTTTGGTACGGGACAAGCT
TCTTTGTGCCAATGCTTGGAGCCGCCATAGCAGATACTTGCTTGGGAAATTATAAGACCA
TCCTGATCTCCCTTATCATGTACCTAATTGGAATGGTACTGATTACAGTTGCAACATTTC
TGCCTTCTACTTCAATCTTATGCGACGCCAGCTCATGCTTGTCATCAAATGGAACTCAAA
CCGTGATTTTCTTTGCTGGTTTGTATCTCACTGCTGTTGGATGTGGAGGCGTAAGATCTG
CATTGCTTCCATTTGGTGCGAGCCAGTTCAACAACGAGAACAATTTAGTAGACATAAAAA
GGAGAAGAAATTTCTTCAGTTCATTCTATATATGTGTCATCTTTGGTGTGATTACTTCTG
GGACAATTATAGTTTGGGTTCAGGAAAATGTGAGCTGGGCTATAGGATATGGAGTTGCCA
CTACATGCATAGGTCTTGCTTTGATAGGATTTCTGGTGGGGACACCAATATTCCAACAAG
ATGAGCCTTGTGGTTCTCCAGTGAAGAGTATTTTCCAGGTTATTGTTGCCTCTTTTAGGA
ACATGAGCTTGGAAGTACCTGCTGATAGCTCTCTTCTGTATGAGGTCAGGAGCAACCACG
TACAAAGGACAATACTTGCTCACTCCGATGATTTTAGGTTCTTAGATAAGGCAGCAGTTA
TTTCTGATCCAAGCTTGGTGTATGGAGGGTGTCGAAGCTCATGGAGTTTATGTACGGTTA
CTGAAGTTGAGGAACTGAAAATACTTATCCGCTTACTCCCAATATGGGTGACTGGAATAT
TCTTTGCTGCTGCGATCTCTCAAATGCACACCACTTTCATTCAGCAGGGAGCTGTGATGA
ACACCAAGATTGGTTCCCTGTCCATTCCACCAGCATCCTTGTACTCATTTGAAGTGATAT
GTGTCACGCTCTGGGTACTTTCTGTGAACAAAGTGCTTGTGCCGGCAACCAGAACGTATT
TTGCAAATGGAGCAGAGCTCACACAGTTACAGAGGATTGGAATTGGTCGTTTCTTGATGA
TCTTTGCCATGGCAATGGCCGCACTTCTAGAAACCAAGAGGCTGCAGAGTGTTCAGGAGG
GGGAACTGCTAAACATTGTATGGCAGCTTCCACAGTACTTCGTCATTGCTGGGGCTGAGT
GCTTCGCTGTCATCACTCAGCTAGAGTTTTTCCATGGCCAAGCGCCAGACTCCATGAAGA
GCATATTAACGGCATTCGCGTTGCTCACCACTGCCCTTGGGAATTACTTGAGCTCAGCTA
TCATCACCCTCATTGCAGGGGTGACCAGGGTATGGCATAGTCCTGGATGGATACCGGATG
ATCTGAACAAGGGACACCTTGATTACTACTACTGGTGTCTTACAGCCCTCTCGTTGGTGA
ATTTTGTTGTGTATCTGTATTTTGCTAGTAAATACAAATTGAAGAAAGTTGTTATCTGCT
AATACTACTTGTGAAATATCACCGAGTGTAACATATGAAATGTTTATTTTTATTCTTAAC
ATGTATAGCAGTATAGGCCATGGAAGGACCTTATTTCCCCAACATATCGTCCCTTGTTTT
TCTCGTAGCGATGTGTGAATGCTAGGAGAAAGATACATATTGTCTGTAGTAACTATTAAT
TCTCTGTTCTTATGCTGGAGGGATCCGTTGATTGCTTCATTTATATACGAATGTAATACT
GATTTGCTGGTGAA