Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90159
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:71748156:71751826:-1 gene:SORBI_3002G354100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGATGGCTTCCGCCGAGCCCAGGAAGAAGAGCAACGTCAAGTATGCCTCCATGTGTGCC
ATCCTCGCCTCCATGGCCGTCATCATCGTTGGATATGACATCGGAGTGATGAGTGGAGCA
GCAATATACATCAAGAAGGACCTGAATATCACGGACGTGCAGCTGGAGATAGTGATGGGC
ATCTTGAACATTTACTCGCTCATCGGTTCCTTTGCGGCAGGGCGGACGTCCGACTGGATT
GGGCGCCGCTTCACTGTGGTCTTCGCCGCTGTCATCTTCTTCGCCGGCTCGCTGCTCATG
GGTTTCGCCGTCAACTACGCCATGCTCATGGCTGGCCGGTTCGTGGCTGGCGTCGGGGTG
GGCTACGCGATCATGATCGCGCCCGTTTACACCGCCGAGATCTCGCCGGCTGCAGTCCGC
GGCTTCCTGACGTCCTTCCCGGAAGTGTTCATCAACGTCGGTATCCTGCTCGGTTACGTG
TCCAACTTCGCGTTCGCTCGCCTTCCCCTCTACCTCGGCTGGCGCGTCATGCTCGGCATC
GGCGCGGCGCCGTCCGCCCTGCTCGCGCTCATGGTGTTCGTCATGCCCGAATCACCTAGG
TGGCTCGTCATGAAGGGCCGCCTCGCGGACGCCAGAGCGGTGCTGGAGAAGACCTCCGAG
ACGCCAGAGGAGGCCGCGGAACGCCTAGCCGACATCAAGGCTGCGGCAGGGATTCCGATG
GACCTCGACGGAGACGTGGTCTCCCTACCCAAGGAGCGAAACGGCGGCGAGAAGCAGGTG
TGGAGGGAGCTCATCTTATCCCCAACCCCGGCCATCCGACGCATACTGCTCTCGGCCGTC
GGCCTCCACTTCTTCCAGCAGGCTTCTGGCATCGACTCCGTCGTCCTGTACAGCCCGCGC
GTGTTCAAGAGCGCCGGAATCACCGACGACAACAAGCTCCTGGGCACCACCTGCGCGGTG
GGCGTCACCAAGACGCTCTTCATCCTGGTGGCCACGTTCCTGCTGGACCGCGCGGGGCGT
CGGCCTCTGCTGCTGACCAGCACGGGTGGGATGATCGTCTCGCTCGTCGGCCTCGGGACG
GGGCTCACCGTCGTGGGGCATCACCCGGACGCCAAGATCCCGTGGGCCGTCGCCCTGTGC
ATCCTGTCCGTCCTGGCCTACGTGTCGTTCTTCTCGATAGGGCTCGGCCCCATCGCAGGT
GTGTACACCTCGGAGATCTTCCCGCTGCGGGTGCGCGCGCTGGGCTTCGCGGTCGGCGTG
GCCAGTAACCGCGTCACCAGCGGCGTGATCTCCATGACATTCCTGTCACTCTCGAAGGCC
ATCACCATCGGCGGCAGCTTCTTCCTCTACTCTGGCATCGCCGCGCTTGCGTGGGTTTTC
TTCTTCACCTACCTCCCGGAGACTCGAGGTCGGACGTTGGAGGAGATGGGCAAGCTGTTC
GGCATGGAAGACACGGACATGGCTGAAATAGAAAACACCGCTGCTAAAGAGAAGGTAGTG
GAAATGCCCACGAGCTAG

Peptide Sequence

PEP ID

OQU90159
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:71748156:71751826:-1 gene:SORBI_3002G354100 transcript:OQU90159 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MMASAEPRKKSNVKYASMCAILASMAVIIVGYDIGVMSGAAIYIKKDLNITDVQLEIVMG
ILNIYSLIGSFAAGRTSDWIGRRFTVVFAAVIFFAGSLLMGFAVNYAMLMAGRFVAGVGV
GYAIMIAPVYTAEISPAAVRGFLTSFPEVFINVGILLGYVSNFAFARLPLYLGWRVMLGI
GAAPSALLALMVFVMPESPRWLVMKGRLADARAVLEKTSETPEEAAERLADIKAAAGIPM
DLDGDVVSLPKERNGGEKQVWRELILSPTPAIRRILLSAVGLHFFQQASGIDSVVLYSPR
VFKSAGITDDNKLLGTTCAVGVTKTLFILVATFLLDRAGRRPLLLTSTGGMIVSLVGLGT
GLTVVGHHPDAKIPWAVALCILSVLAYVSFFSIGLGPIAGVYTSEIFPLRVRALGFAVGV
ASNRVTSGVISMTFLSLSKAITIGGSFFLYSGIAALAWVFFFTYLPETRGRTLEEMGKLF
GMEDTDMAEIENTAAKEKVVEMPTS

Transcript Sequence

Transcript ID

OQU90159
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:71748156:71751826:-1 gene:SORBI_3002G354100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATACGGCGTTTCCTTCGATACAACACTTCACTGAACCACTGCACAGCACCTTGTGTCCTT
GTCTCTAATCGCTAATCAGAGACCACTGTTAATGATGGCTTCCGCCGAGCCCAGGAAGAA
GAGCAACGTCAAGTATGCCTCCATGTGTGCCATCCTCGCCTCCATGGCCGTCATCATCGT
TGGATATGACATCGGAGTGATGAGTGGAGCAGCAATATACATCAAGAAGGACCTGAATAT
CACGGACGTGCAGCTGGAGATAGTGATGGGCATCTTGAACATTTACTCGCTCATCGGTTC
CTTTGCGGCAGGGCGGACGTCCGACTGGATTGGGCGCCGCTTCACTGTGGTCTTCGCCGC
TGTCATCTTCTTCGCCGGCTCGCTGCTCATGGGTTTCGCCGTCAACTACGCCATGCTCAT
GGCTGGCCGGTTCGTGGCTGGCGTCGGGGTGGGCTACGCGATCATGATCGCGCCCGTTTA
CACCGCCGAGATCTCGCCGGCTGCAGTCCGCGGCTTCCTGACGTCCTTCCCGGAAGTGTT
CATCAACGTCGGTATCCTGCTCGGTTACGTGTCCAACTTCGCGTTCGCTCGCCTTCCCCT
CTACCTCGGCTGGCGCGTCATGCTCGGCATCGGCGCGGCGCCGTCCGCCCTGCTCGCGCT
CATGGTGTTCGTCATGCCCGAATCACCTAGGTGGCTCGTCATGAAGGGCCGCCTCGCGGA
CGCCAGAGCGGTGCTGGAGAAGACCTCCGAGACGCCAGAGGAGGCCGCGGAACGCCTAGC
CGACATCAAGGCTGCGGCAGGGATTCCGATGGACCTCGACGGAGACGTGGTCTCCCTACC
CAAGGAGCGAAACGGCGGCGAGAAGCAGGTGTGGAGGGAGCTCATCTTATCCCCAACCCC
GGCCATCCGACGCATACTGCTCTCGGCCGTCGGCCTCCACTTCTTCCAGCAGGCTTCTGG
CATCGACTCCGTCGTCCTGTACAGCCCGCGCGTGTTCAAGAGCGCCGGAATCACCGACGA
CAACAAGCTCCTGGGCACCACCTGCGCGGTGGGCGTCACCAAGACGCTCTTCATCCTGGT
GGCCACGTTCCTGCTGGACCGCGCGGGGCGTCGGCCTCTGCTGCTGACCAGCACGGGTGG
GATGATCGTCTCGCTCGTCGGCCTCGGGACGGGGCTCACCGTCGTGGGGCATCACCCGGA
CGCCAAGATCCCGTGGGCCGTCGCCCTGTGCATCCTGTCCGTCCTGGCCTACGTGTCGTT
CTTCTCGATAGGGCTCGGCCCCATCGCAGGTGTGTACACCTCGGAGATCTTCCCGCTGCG
GGTGCGCGCGCTGGGCTTCGCGGTCGGCGTGGCCAGTAACCGCGTCACCAGCGGCGTGAT
CTCCATGACATTCCTGTCACTCTCGAAGGCCATCACCATCGGCGGCAGCTTCTTCCTCTA
CTCTGGCATCGCCGCGCTTGCGTGGGTTTTCTTCTTCACCTACCTCCCGGAGACTCGAGG
TCGGACGTTGGAGGAGATGGGCAAGCTGTTCGGCATGGAAGACACGGACATGGCTGAAAT
AGAAAACACCGCTGCTAAAGAGAAGGTAGTGGAAATGCCCACGAGCTAGAAGGAAACCAA
GGAACAGCTGCCGCAGCTTCAGTCTCACAGAGCCGAGCTATTCGCTTTCTCAGGTGCCGT
GTGCTGCTGCAGCCTGCTGCACGTAGGACAGTCCGACGGTGACGGCGAGGCCCTATTAGA
ATATACGTTTTCATGTACAAGATATGCCGTGTAGATTATAAACGGCATATCTTTCCTTAC
TTGTAGAGAAGGTTGTTTGATAGATATTCTTGATAGGTTGTTGTAATCCTAACTTGATGT
ACAAGCCATGCTGAGGGCTGTTCTCAGATTATATAAACATGCAACCGAGGATCCCTAGGG
GTAACCTCGTTCATCTACTTTCACACGGTATCGAGCTCTTTTTTCCTCACGGAGTTCTTC
CATGGCGTTCGCTTCTTCATCCTCCGGGGTGTCTGCTGCTGTAGCACTCACCACCTTCCT
TCCAGTCACCGAGAAACTCACCCGCACCAACCATCAATCATGGAAGGCACACGTTCTCTC
GGCGCTTCGGGGGGCACAGCTCGCCGATTGGCTAGAGGCCAATGCCGAGCCGCCGGCCAA
GTTCCTCACCAAGATCAAGCCTGATGATCCCGACAAGGCCAACCCCGACTACGCTACTTG
GGTAGCCAAAGATCAGACAGTTCTAAGCTATCTGCTCACGAACCTGTCTAAAGAAGTTCT
CGCTCAAGTCAACACCGAGGTCACCGCCAAAGGTGCATGGGCGGCCATTGAGGGACTCTT
CGCGTCCCAGTCACGCGCCAAGATCATCACCACCCGTATGCAACTCGCTACGATCACCAA
GGGTGCTTCCACCATTGGGGAATACTTCACCAAGATCAAGGCGCTCGCGGATCAGATGGC
GGCTGCTGGCCGCAAGATTGAAGATGAGGAGCTTGTCTCCTATGTCCTCACCGGCCTTGG
GGAGGATTTTGACTCCATCGTTGCAGCCATCTCCACCTGTGTGGAACCGATCTCCATCCA
CGAACTGCTCGCTCAACTCACCAGTCATGAGCAGCGCGTGGTTCTTCGCAATGGTGGTGA
CCAGCAGCCCTCGGCTAACGTCGTCACCAAGGGTGGTCGTCCCACTGCCTACCACAACCG
AGGCAACGGTGTCGGCCGTGGTGGTGGTGGTGGTGGCCGCAATGACCGCGGTGACCGCGG
TAGGCGCGGCTTTGCCCGTGGAAATCTCAATGGTGGACGCGGTAGCAACTTCATCCAGGG
GCTCATCTGTCAGGTCTGCGGAAAAGAAGGTCATCCGGCCTTCCGTTGTTTCAAACGCTT
CAACAAGGACTACAATGGAGGTCCCCCACAAAAGTCTGTCTCCTCGGCCAGCACCTCTTC
GTATGGTGTTGACACGAACTGGTATGTTGACTCCGGCGCAACCGACCACATCACCGGGGA
ATTGGAGAAATTATCCTTCCGCGACAAGTACCACGGCGGCGAACAAGTTCATGCTGCCGA
CGGGCTAGGTATGAAGATTACAAATGTTGGTCATAGCTTTTTGCATACCCCTAGTAGAAA
TCTTCGTTTGCATAAAATTCTTCATGTTCCTCAATCTCATAAAAGCCTTTGCTCTGTCAA
TCGCCTTACCAAAGATAATAATGTGATTGTTGAATTTCACCCCGATCATTTTCTTATCAA
GGAACAGGTGACGGGGAACATACTTCACAGAGGTCGGTGTGAGGGTGGTCTCTACCCTTT
GTTGCTCCCATCGAATAAGTCGTCCAATAAGCAAGCCCTCCATGCTGTCAAGCTGGCTGC
GTCCTTGTGGCACCATCGTCTAGGACATCCCTCTACTGCTGTAGTTCAGGAAGTTCTAAA
TCGCCACAAGCTCTCTTTCTTCAATGATTTCAATAAGTCTAGGGTGTGCGATGCATGTCA
AAAAGGCAAAAGTCACCAGTTGCCTTACCCTAGATCAACTAGTTTGTCTTCTAGTCCTAT
GGATTTGATATTCTCCGATGTACCTGCTCCTAGTTCCA