Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90111
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:70869179:70872202:-1 gene:SORBI_3002G342100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAGGTCCATGGAGAGCACGGACTCGTCGTCCGGCGAGTTGCCACCACCGCAGAAGCAG
CCGAGCTCGGCGCCGGATCTCCCGCCGGGGTTCCGGTTCCATCCGACGGACGAGGAGCTG
GTCGTCCACTACCTCAAGAAGAAGGCTGCGTCCGTGCCTCTACCCGTCGCCATCATCGCC
GAGGTCGACCTTTACAAGTTCGATCCGTGGGAGCTACCTGATAAGGCGACCTTCGGGGAG
CAGGAGTGGTACTTCTTCAGCCCGAGGGACCGCAAGTACCCCAACGGAGCGCGGCCGAAC
AGGGCGGCGACGTCCGGCTACTGGAAGGCGACTGGCACAGACAAGCCCATCATGGCGTCC
GGCGGCAACCGCGAGAAGGTCGGCGTCAAGAAGGCGCTCGTGTTCTACCGCGGGAAGCCG
CCAAAGGGCCTCAAGACCAACTGGATCATGCACGAGTACCGCCTCGCGGATGCGGCGAGC
TCAACCACCAGCCGGCCGCCGCCGCCATGCAACGTCGGAGGAGGCAAGGCCACATCTCTC
AGGCTCGACGACTGGGTGTTATGCCGCATCTACAAGAAGATCAACAAGCTTGGAGCCGGC
GAGAGGAGCATGGACTGCGAGGACTCCGTGGAGGACGCAGTGGCAGCCTACCCGACTCAT
GCCGCGGCTGCCATGGCCGCCGCCGTCGCAGGCGGAGGAAGGGCGGCTCATCATAACGGC
AATAGTTACACATCGCTGATCCACCACCATCACGAGGACAACTTCCTGGATGGATTCATG
ACAGCAGAGGACACAGGCCTCTCAGCGGGCGCCAGCTCCCTGAGCCAGCTAGCCGCGGCG
GCGAGGGCAGCTGCTCCAGCTGACACCAAGCAGCTCCTCGTCCCGTCGTCCTCCACCACC
CCATTCAACTGGCTCGACGCGTCCGCACTCGCAATTCTTCCACCCTCAAAGAGGTTCCAT
GGGTACAACAGTGGAGGCACGTCCACTGACGGCGGCGGCACGTCCCTGTCGTCGCCGTCC
GAGAGGAATAATCTGGCGGCTGCCGGTGCCGTCGATAGTGGCGCCTGCAGCGGTGGCGCT
AATGCCATCGTTCCTACATTCCTCAACCCGCTCGGCGTGCAAGGTGCGACAACCTATCAC
CACCACGCCATTTTCGGCACACCAGTAACGCCGGAAGCTGCCGCGGCCGCCGCCACCACC
GCCACATGCGGTTTCCAGCATCCCTACCAGCTCTCCGGCGTGAACTGGAACCCGTGA

Peptide Sequence

PEP ID

OQU90111
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:70869179:70872202:-1 gene:SORBI_3002G342100 transcript:OQU90111 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MRSMESTDSSSGELPPPQKQPSSAPDLPPGFRFHPTDEELVVHYLKKKAASVPLPVAIIA
EVDLYKFDPWELPDKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMAS
GGNREKVGVKKALVFYRGKPPKGLKTNWIMHEYRLADAASSTTSRPPPPCNVGGGKATSL
RLDDWVLCRIYKKINKLGAGERSMDCEDSVEDAVAAYPTHAAAAMAAAVAGGGRAAHHNG
NSYTSLIHHHHEDNFLDGFMTAEDTGLSAGASSLSQLAAAARAAAPADTKQLLVPSSSTT
PFNWLDASALAILPPSKRFHGYNSGGTSTDGGGTSLSSPSERNNLAAAGAVDSGACSGGA
NAIVPTFLNPLGVQGATTYHHHAIFGTPVTPEAAAAAATTATCGFQHPYQLSGVNWNP

Transcript Sequence

Transcript ID

OQU90111
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:70869179:70872202:-1 gene:SORBI_3002G342100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CCCGCCCGCCTGCGCCTCCGTCTCCGGCCGGCTCTCCTCCATCGCTACGATTCCCCCAGG
GCGAAACCACCAAAAATCCCAGCGCAGATCACTCGCCGGCCGCCTGCTCCATCAGATCCT
CCCAACCGACAGCGTAACAGACCCCGGCTATCCTCGTCGCTGTCGGCTCTCCTGCTTCAC
ACTACTAGACTAGAGGCGGCCGGCTCTGCCAAACTGCAGGGAGGGATCCATCCCGCGGTA
AGCAGCGAACTGCATGGCAGTTGTTGGTGGGTAGCACAAGGTGCTAGCTGCTGTGCTTTT
TGTGTGCGTAGTATATATAGTCTGGTAGATCGATCTACTGATCTGGTGTGTTGGTGCTTG
GAACAGGGGCCGGTGATGAGGTCCATGGAGAGCACGGACTCGTCGTCCGGCGAGTTGCCA
CCACCGCAGAAGCAGCCGAGCTCGGCGCCGGATCTCCCGCCGGGGTTCCGGTTCCATCCG
ACGGACGAGGAGCTGGTCGTCCACTACCTCAAGAAGAAGGCTGCGTCCGTGCCTCTACCC
GTCGCCATCATCGCCGAGGTCGACCTTTACAAGTTCGATCCGTGGGAGCTACCTGATAAG
GCGACCTTCGGGGAGCAGGAGTGGTACTTCTTCAGCCCGAGGGACCGCAAGTACCCCAAC
GGAGCGCGGCCGAACAGGGCGGCGACGTCCGGCTACTGGAAGGCGACTGGCACAGACAAG
CCCATCATGGCGTCCGGCGGCAACCGCGAGAAGGTCGGCGTCAAGAAGGCGCTCGTGTTC
TACCGCGGGAAGCCGCCAAAGGGCCTCAAGACCAACTGGATCATGCACGAGTACCGCCTC
GCGGATGCGGCGAGCTCAACCACCAGCCGGCCGCCGCCGCCATGCAACGTCGGAGGAGGC
AAGGCCACATCTCTCAGGCTCGACGACTGGGTGTTATGCCGCATCTACAAGAAGATCAAC
AAGCTTGGAGCCGGCGAGAGGAGCATGGACTGCGAGGACTCCGTGGAGGACGCAGTGGCA
GCCTACCCGACTCATGCCGCGGCTGCCATGGCCGCCGCCGTCGCAGGCGGAGGAAGGGCG
GCTCATCATAACGGCAATAGTTACACATCGCTGATCCACCACCATCACGAGGACAACTTC
CTGGATGGATTCATGACAGCAGAGGACACAGGCCTCTCAGCGGGCGCCAGCTCCCTGAGC
CAGCTAGCCGCGGCGGCGAGGGCAGCTGCTCCAGCTGACACCAAGCAGCTCCTCGTCCCG
TCGTCCTCCACCACCCCATTCAACTGGCTCGACGCGTCCGCACTCGCAATTCTTCCACCC
TCAAAGAGGTTCCATGGGTACAACAGTGGAGGCACGTCCACTGACGGCGGCGGCACGTCC
CTGTCGTCGCCGTCCGAGAGGAATAATCTGGCGGCTGCCGGTGCCGTCGATAGTGGCGCC
TGCAGCGGTGGCGCTAATGCCATCGTTCCTACATTCCTCAACCCGCTCGGCGTGCAAGGT
GCGACAACCTATCACCACCACGCCATTTTCGGCACACCAGTAACGCCGGAAGCTGCCGCG
GCCGCCGCCACCACCGCCACATGCGGTTTCCAGCATCCCTACCAGCTCTCCGGCGTGAAC
TGGAACCCGTGAATCATCCATGATACCGACATTGCCTATGGGCATGAATTGATGCATATG
GCTGGCTTTTAAGGTAGTCAGCATCGCCAGCAGCTAGTACCAGTTGTTATAGTAGTAGTC
TCATTCAGTGAACCACAAGGACAAATATGCATGCATATTGCTGCATTGCCTACCACAAGC
ACGTACTTGTACGGAGCTAATTAAGCAACCTTGCAACTTGGTAGGCCAATTTGAAGCAAA
ATCTAGCTAGCCAATACTTACATAGATATGATATTAATTAGTCATTTAGCCTCTTGCATC
TATAGATTGAACCCTGCATAAATTAATTTAGCCTGTATGCATGTTCATGACCACCCCTGT
TATCCCCGCCACAAAACAAAATTAACTGCTGTGTATACATATTTTACTATATATAGCCAG
TTCACATAGGCATGTCGTTAACATGGAAAATATATAATATATAGGTCACGTACTATACGG
TAATTATATTGCATGCATGCATGTTGACATTTTGTATGCATGTAGATATTTGTATGCTTA
AAGCTCGAAAAAGAAAGGTATTTGTATGCTTGATGATCATGCATATGCACACGCATGGAC
GATGTTCATACTAGCTAGTAGCCTACTACATACCTACAGAGAATCTCCTAATTGAGCCGC
AGCTGTGTATATCGCTTGCAATGGGTTGGTTGCTACATATAAAAGTTCTAGCCTTCGTCG
CCTGTCATTGTCGCCATGTATAGGCACCCTGCAGGGTTGTGTGCACAATTTTATAGCTGC
ATATGTAATCTATGTTTCGGTTGGATTATTGGACTGTAATGTATATACAGAGACGAGTTT
AAAAATGGCTAGACCATTTGCACTATCCCCTGAGGTGC