Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU90069
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:70227888:70231133:-1 gene:SORBI_3002G333900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGATGGCCGCGGCGGCAGTGACTCGCCGGGTCAATGCCATTGCCAGCCTCGACGTCGAG
GCGACCAACGGCGTCGTCGCCGGCGAGGAGAGCAGGCGCAGCAGCTCGGCAGCTGACGAC
TCGCCGGTGGCCAAGCAGATTGACGATGCCGCCGCCAAGGACAATGATGTCTGGGTGGCC
ATTCAGGAGGGAGACATGCCTGCAGGCAACTCCAGCCAGCCCGTGCTGTTCCGGACCATG
AAGGTCAAGGGCAGCATCCTGCATCCTTACAGGTTTGTGATTCTCCTGCGGCTGATCGCC
ATCATCGCGTTCTTCATATGGCGCATCCGGAACCGAAACCGCGACGGCGTGTGGATCTGG
GCCATGTCCATGGCCGGCGACGTCTGGTTCGGCTTGTCATGGGTCCTCAACCAGCTCCCG
AAGCTGAACCCCATCAAGCGTGTCCCGGACCTCGCCGCCATCAGAGACCAGCACGAGTCC
ACCAAGTCCAACTCCAATCTCCCCGGCATCGACGTCTTCCTCACCACCGTCGACCCGGTA
GACGAACCCATACTGTACACGGTGAACTCCGTGCTCTCCATCCTCGCCACCGACTACCCG
GTCGAGAAGTACGCCTGCTACCTCTCCGACGACGGCGGCACGTTGGTCCACTACGAAGCG
ATGCTCCAAGTTGCAAGCTTCGCCAAGCTATGGGCGCCGTTCTGCCGGAAGCATGGCGTC
GAGCCGAGAGCGCCGGAGAGCTACTTCGGAGTGAAGAGGAGGCAGCCGTACACCGGAAGC
ATGCCGGAGGAGTTCACGAGTGATCACAGGCGCGTGCGCAGAGAATACGAAGAGTTCAAG
GTGAGGATAGACTCTCTTTTCAGCACCATCTACCAGAGATCTGAAGCGTACAACAGGAAG
CATGCCAAGGACGAAGATGGTGTGATGAAGGCGACGTGGATGGCTGACGGCACGCAGTGG
CCTGGGACATGGATTGAGCAGGCTGAGAACCATAGAAAAGGACAGCACGCTGGAATTGTT
AAGGTCATACTAAACCATCCGAGCCATAAACCACAGCTCGGTTCACCAGCAAGCACTGAC
AGTCCATTCAACTTCAGCAACGTCGACACACGCCTCCCCATGCTCGTCTACTTGTCCCGC
GAGAAGCGCCATGGCTATAACCACCAGAAGAAAGCCGGCGCCATGAACGCGATGCTCCGG
GCATCCGCCGTGCTCTCCAACGCGCCGTTCCTCATCAACTTCGACTGCGACCACTACATC
AACAACTCGCAGGCTTTCCGCGCCAGCATGTGCTTCATGCTCGACCCACGCGACGGCGAG
AACACCGCGTTCGTCCAGTTCCCGCAGCGCTTCGACGGCGTCGACCCCACGGACCGGTAC
GCCAACCACAACCGCGTCTTCTTCGACGGCACCATGCTCTCCCTCAACGGCCTGCAGGGG
CCTTCCTACCTCGGCACCGGAACCATGTTCCGTCGCGCCGCGCTCTACGGCATGGAGCCA
CCGCGGTGGAGAGCAGCCGACGACGACGGCAATGGCAATGGCAACGGCAAAGAATATGGT
AGATCGACATTGTTCATAAACTCAATGCTAGACGGCGCCCCGAACCAAGACCGACGATCT
ATCACGCCGGTGTTCGTCGACGGTGAAGAGTCGACGACGGTCAGCAGCGAGCTGCTGCTG
GCGTCGCTGATGACGTGCGCTTACGAGGACGGGACTTCGTGGGGGAGAGACGCCGGGTGG
GTGTACAACATCGCGACGGAGGACGTGGTGACCGGCTTCCGCATGCACCGGCAAGGGTGG
CGCTCCGTCTACTGCTCCGTCGAGCCGGCGGCGTTCCGCGGCACCGCTCCGATCAACCTC
ACGGAGCGCCTCCTCCAGCTGCTCCGCTGGTCGGGCGGCTCCCTGGAGATGTTCTTCTCC
CACAGCAACGCGCTCCTCGCCGCCGGCGCCGCCCGGATGCACCCGCTGCAGCGCGTGGCG
TACCTCAACATGTCTACCTACCCGCTCGTCACCGTCTTCATCCTGGCCTACAACCTGTTC
CCTCTGATGTGGCTCGTCTCGGAGCAGTACTACATCCAGAGGCCCTTCGGCGCGTACATC
CTGTACCTGGCGGCGATCATCGCCATGATCCACGTGATCGGCATGTTCGAGGTGCGATGG
GCGGGGCTGACGCTGCTGGACTGGTGCCGGAACGAGCAGTTCTACATGATCGGCGCCACG
GGGGTGTACCCGACGGCGGTGCTGTACATGGCGCTGAAGCTCTTCACCGGAAAGGGCATC
CACTTCAGGCTCACGTCGAAGCAGACGGCGGCGGAAGCCTGCTCCGGCGACAAGTTCGCC
GACCTGTACGTCGTGAGGTGGGTGCCGCTGCTGGTCCCGACCGTCGCCGTTCTGGCCGTG
AACGTCGCGGCGGTGGGCGTGGCGGTAGGCAAGGCGGCGACCTGGGGCCTGCTCACGGAG
CAGGCGCAGCACGCGGTGCTTGGCATGGTGTTCAACGTCTGGATCCTTGTGCTTCTCTAC
CCGTTTGCGCTCGGGATCATGGGACACTGGGGGAAGAAACCGGCCATCCTGTTCGTTTTG
CTGGTGATGGCCATTGGTACGGTCGCTGTCGTGTATATCAGCTTCAGTGCCACGTACCCA
GTAGGATGGTCAGACATGGCAGCTTCTTCTCTTGGTACATCGGAATCGGTGATTGCAGCT
GGGTCATCAGGGTAG

Peptide Sequence

PEP ID

OQU90069
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:70227888:70231133:-1 gene:SORBI_3002G333900 transcript:OQU90069 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MMAAAAVTRRVNAIASLDVEATNGVVAGEESRRSSSAADDSPVAKQIDDAAAKDNDVWVA
IQEGDMPAGNSSQPVLFRTMKVKGSILHPYRFVILLRLIAIIAFFIWRIRNRNRDGVWIW
AMSMAGDVWFGLSWVLNQLPKLNPIKRVPDLAAIRDQHESTKSNSNLPGIDVFLTTVDPV
DEPILYTVNSVLSILATDYPVEKYACYLSDDGGTLVHYEAMLQVASFAKLWAPFCRKHGV
EPRAPESYFGVKRRQPYTGSMPEEFTSDHRRVRREYEEFKVRIDSLFSTIYQRSEAYNRK
HAKDEDGVMKATWMADGTQWPGTWIEQAENHRKGQHAGIVKVILNHPSHKPQLGSPASTD
SPFNFSNVDTRLPMLVYLSREKRHGYNHQKKAGAMNAMLRASAVLSNAPFLINFDCDHYI
NNSQAFRASMCFMLDPRDGENTAFVQFPQRFDGVDPTDRYANHNRVFFDGTMLSLNGLQG
PSYLGTGTMFRRAALYGMEPPRWRAADDDGNGNGNGKEYGRSTLFINSMLDGAPNQDRRS
ITPVFVDGEESTTVSSELLLASLMTCAYEDGTSWGRDAGWVYNIATEDVVTGFRMHRQGW
RSVYCSVEPAAFRGTAPINLTERLLQLLRWSGGSLEMFFSHSNALLAAGAARMHPLQRVA
YLNMSTYPLVTVFILAYNLFPLMWLVSEQYYIQRPFGAYILYLAAIIAMIHVIGMFEVRW
AGLTLLDWCRNEQFYMIGATGVYPTAVLYMALKLFTGKGIHFRLTSKQTAAEACSGDKFA
DLYVVRWVPLLVPTVAVLAVNVAAVGVAVGKAATWGLLTEQAQHAVLGMVFNVWILVLLY
PFALGIMGHWGKKPAILFVLLVMAIGTVAVVYISFSATYPVGWSDMAASSLGTSESVIAA
GSSG

Transcript Sequence

Transcript ID

OQU90069
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:70227888:70231133:-1 gene:SORBI_3002G333900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CACGAACTAGGTGTGGCTCACCGTTCGAGATGATGGCCGCGGCGGCAGTGACTCGCCGGG
TCAATGCCATTGCCAGCCTCGACGTCGAGGCGACCAACGGCGTCGTCGCCGGCGAGGAGA
GCAGGCGCAGCAGCTCGGCAGCTGACGACTCGCCGGTGGCCAAGCAGATTGACGATGCCG
CCGCCAAGGACAATGATGTCTGGGTGGCCATTCAGGAGGGAGACATGCCTGCAGGCAACT
CCAGCCAGCCCGTGCTGTTCCGGACCATGAAGGTCAAGGGCAGCATCCTGCATCCTTACA
GGTTTGTGATTCTCCTGCGGCTGATCGCCATCATCGCGTTCTTCATATGGCGCATCCGGA
ACCGAAACCGCGACGGCGTGTGGATCTGGGCCATGTCCATGGCCGGCGACGTCTGGTTCG
GCTTGTCATGGGTCCTCAACCAGCTCCCGAAGCTGAACCCCATCAAGCGTGTCCCGGACC
TCGCCGCCATCAGAGACCAGCACGAGTCCACCAAGTCCAACTCCAATCTCCCCGGCATCG
ACGTCTTCCTCACCACCGTCGACCCGGTAGACGAACCCATACTGTACACGGTGAACTCCG
TGCTCTCCATCCTCGCCACCGACTACCCGGTCGAGAAGTACGCCTGCTACCTCTCCGACG
ACGGCGGCACGTTGGTCCACTACGAAGCGATGCTCCAAGTTGCAAGCTTCGCCAAGCTAT
GGGCGCCGTTCTGCCGGAAGCATGGCGTCGAGCCGAGAGCGCCGGAGAGCTACTTCGGAG
TGAAGAGGAGGCAGCCGTACACCGGAAGCATGCCGGAGGAGTTCACGAGTGATCACAGGC
GCGTGCGCAGAGAATACGAAGAGTTCAAGGTGAGGATAGACTCTCTTTTCAGCACCATCT
ACCAGAGATCTGAAGCGTACAACAGGAAGCATGCCAAGGACGAAGATGGTGTGATGAAGG
CGACGTGGATGGCTGACGGCACGCAGTGGCCTGGGACATGGATTGAGCAGGCTGAGAACC
ATAGAAAAGGACAGCACGCTGGAATTGTTAAGGTCATACTAAACCATCCGAGCCATAAAC
CACAGCTCGGTTCACCAGCAAGCACTGACAGTCCATTCAACTTCAGCAACGTCGACACAC
GCCTCCCCATGCTCGTCTACTTGTCCCGCGAGAAGCGCCATGGCTATAACCACCAGAAGA
AAGCCGGCGCCATGAACGCGATGCTCCGGGCATCCGCCGTGCTCTCCAACGCGCCGTTCC
TCATCAACTTCGACTGCGACCACTACATCAACAACTCGCAGGCTTTCCGCGCCAGCATGT
GCTTCATGCTCGACCCACGCGACGGCGAGAACACCGCGTTCGTCCAGTTCCCGCAGCGCT
TCGACGGCGTCGACCCCACGGACCGGTACGCCAACCACAACCGCGTCTTCTTCGACGGCA
CCATGCTCTCCCTCAACGGCCTGCAGGGGCCTTCCTACCTCGGCACCGGAACCATGTTCC
GTCGCGCCGCGCTCTACGGCATGGAGCCACCGCGGTGGAGAGCAGCCGACGACGACGGCA
ATGGCAATGGCAACGGCAAAGAATATGGTAGATCGACATTGTTCATAAACTCAATGCTAG
ACGGCGCCCCGAACCAAGACCGACGATCTATCACGCCGGTGTTCGTCGACGGTGAAGAGT
CGACGACGGTCAGCAGCGAGCTGCTGCTGGCGTCGCTGATGACGTGCGCTTACGAGGACG
GGACTTCGTGGGGGAGAGACGCCGGGTGGGTGTACAACATCGCGACGGAGGACGTGGTGA
CCGGCTTCCGCATGCACCGGCAAGGGTGGCGCTCCGTCTACTGCTCCGTCGAGCCGGCGG
CGTTCCGCGGCACCGCTCCGATCAACCTCACGGAGCGCCTCCTCCAGCTGCTCCGCTGGT
CGGGCGGCTCCCTGGAGATGTTCTTCTCCCACAGCAACGCGCTCCTCGCCGCCGGCGCCG
CCCGGATGCACCCGCTGCAGCGCGTGGCGTACCTCAACATGTCTACCTACCCGCTCGTCA
CCGTCTTCATCCTGGCCTACAACCTGTTCCCTCTGATGTGGCTCGTCTCGGAGCAGTACT
ACATCCAGAGGCCCTTCGGCGCGTACATCCTGTACCTGGCGGCGATCATCGCCATGATCC
ACGTGATCGGCATGTTCGAGGTGCGATGGGCGGGGCTGACGCTGCTGGACTGGTGCCGGA
ACGAGCAGTTCTACATGATCGGCGCCACGGGGGTGTACCCGACGGCGGTGCTGTACATGG
CGCTGAAGCTCTTCACCGGAAAGGGCATCCACTTCAGGCTCACGTCGAAGCAGACGGCGG
CGGAAGCCTGCTCCGGCGACAAGTTCGCCGACCTGTACGTCGTGAGGTGGGTGCCGCTGC
TGGTCCCGACCGTCGCCGTTCTGGCCGTGAACGTCGCGGCGGTGGGCGTGGCGGTAGGCA
AGGCGGCGACCTGGGGCCTGCTCACGGAGCAGGCGCAGCACGCGGTGCTTGGCATGGTGT
TCAACGTCTGGATCCTTGTGCTTCTCTACCCGTTTGCGCTCGGGATCATGGGACACTGGG
GGAAGAAACCGGCCATCCTGTTCGTTTTGCTGGTGATGGCCATTGGTACGGTCGCTGTCG
TGTATATCAGCTTCAGTGCCACGTACCCAGTAGGATGGTCAGACATGGCAGCTTCTTCTC
TTGGTACATCGGAATCGGTGATTGCAGCTGGGTCATCAGGGTAGATATAATCATTTTTTT
AATGCCACTGTATGTTTGGTGTAATAGTTTGAAGGTCTTGAGATATGATCTTGGCCGGCT
CAAGTAAGAGCTGTATCCATCCAATGTTTGTTGTTGACGCCAACATTTTCAAGATTCTTG
AAGTCTCTTACTTTGTATTCGATAACTTATGTGAC