Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU89934
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:67310606:67315198:1 gene:SORBI_3002G296100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCACCGCCGCCGCCACTTTCGGGTTACTCCGTCCTCCCACGCGGACACCTGCAATC
TCACAGCTGTACATTCTCCCACTTCCCACCCAACCCCACTCCAAAACGCACCCTCGTCCT
CTCCCCCTCCCGCGCCGCCGCCGGGGCGGCCCCATCGCCGCCTTCCCCAACGCCACATCT
TCGTCCACGAATGCCTCTGCCTCGCCCACCTACGACGTCCGGGAGGCAGAGGCCGCCGTC
GCGGAGCTCCTCCGTGAGGGCGGCGCCTCCCCGGCCGACGCCGCCGCCATCGCCACGCGC
GCGCCGGCCTACGCCGCTATGCTCGCCGATGGCGTCCGCGAGCTGGACGAGCTCGGCCTC
TGGGCTTCGTGGAGCTCCGGTGCCGGGGCCCGGCTGAGCCTCAGCGGGGCCGTTGAGATG
GAGGTGGGGAGGCTCGGTTTCAGGAGGAAGGTGTACCTCATGGGACGGAGCAGACGTGAC
CACGGCGTGGTGCCGCTCCTCGAGAGCTTGGGGGTGCGTCTCTCCTCGGCCAAGCTCATC
GCGCCTTACGTCGCGGCTGCAGGCCTCACTGTGCTGATTGACAGGGTTAAGTTTTTGAAG
GAAATGTTATTTTCAAGCAGTGATTATGCAATACTAATTGGAAGGAATGCTAAGCGCATG
ATGATACACTTATCAATACCTGCAGATGATGCACTCCAAAGTACTTTATCTTTTTTTGAA
AAAATGGAGGCTAGGTATGGTGGTATTAGCATGTTGGGACATGGAGATGTGTCATTTCCT
TACCTCATTGAATCATTTCCAATGCTTCTTCTCTGCTCAGAAGATAACCATCTCAAGCCA
TTAGTTGATTTTCTGGAGCACATTGGAATTCCAAAGACAAAGATTGCATCAGTCCTGCTG
CTATTTCCTCCTATCATTCTTTCTGATGTTGAAAACGATATTAAGCCTAGGATTCGTGAA
TGGGAGAAGGCTGGCATGGAACAAGACTATATTGGTAGGATGTTGTTGAAGTATCCATGG
ATTCTTTCAACAAGTGTGATAGAGAACTACAGTCAAATGCTGTTATTTTTCAACCGAAAA
AAGAATGTTTTACTTTTCAGAGAAATGGGTGTTGATAAGAAAACAACAGGAAAGATTTTG
TGTCGTGCGCCTGAAATATTTGCTTCAAATGTGGATAGCACCCTCAAGAAGAAAATCGAC
TTTCTTATCAACTTTGGTGTTTCTAAACATCATCTTCCTCGCATCATTAGGAAGTATCCA
GAACTTTTATTGTTGGACATAAATCGTACATTGCTCCCCAGGATGAACTACCTATTGGAG
GTGGGTTTGTCTAAGAAAGATATATGCTCAATGATCTTTAGATTTTCCCCACTTCTAGGT
TACAGTATTGAGCTTGTTATGAAACCAAAGCTTGAGTTTCTGCTAAGAACCATGAAGAAG
CCACTTAAAGCAGTTGTAGAATACCCAAGGTACTTCAGTTATTCACTTGAGGGGAAGATC
AAACCGCGGTTTTGGGTACTGCAGAGTAGAAACATAGACTGCACTCTGACAGAGATGTTT
GCAAAGAACGATGAACTCTTTGCTGAAGAGTACTTGGGACTTGATGGATTGCTCGAGAAA
CCTCTACAATCAAGCATAGGCGGTTAA

Peptide Sequence

PEP ID

OQU89934
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:67310606:67315198:1 gene:SORBI_3002G296100 transcript:OQU89934 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MATAAATFGLLRPPTRTPAISQLYILPLPTQPHSKTHPRPLPLPRRRRGGPIAAFPNATS
SSTNASASPTYDVREAEAAVAELLREGGASPADAAAIATRAPAYAAMLADGVRELDELGL
WASWSSGAGARLSLSGAVEMEVGRLGFRRKVYLMGRSRRDHGVVPLLESLGVRLSSAKLI
APYVAAAGLTVLIDRVKFLKEMLFSSSDYAILIGRNAKRMMIHLSIPADDALQSTLSFFE
KMEARYGGISMLGHGDVSFPYLIESFPMLLLCSEDNHLKPLVDFLEHIGIPKTKIASVLL
LFPPIILSDVENDIKPRIREWEKAGMEQDYIGRMLLKYPWILSTSVIENYSQMLLFFNRK
KNVLLFREMGVDKKTTGKILCRAPEIFASNVDSTLKKKIDFLINFGVSKHHLPRIIRKYP
ELLLLDINRTLLPRMNYLLEVGLSKKDICSMIFRFSPLLGYSIELVMKPKLEFLLRTMKK
PLKAVVEYPRYFSYSLEGKIKPRFWVLQSRNIDCTLTEMFAKNDELFAEEYLGLDGLLEK
PLQSSIGG

Transcript Sequence

Transcript ID

OQU89934
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:67310606:67315198:1 gene:SORBI_3002G296100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCCACCGCCGCCGCCACTTTCGGGTTACTCCGTCCTCCCACGCGGACACCTGCAATC
TCACAGCTGTACATTCTCCCACTTCCCACCCAACCCCACTCCAAAACGCACCCTCGTCCT
CTCCCCCTCCCGCGCCGCCGCCGGGGCGGCCCCATCGCCGCCTTCCCCAACGCCACATCT
TCGTCCACGAATGCCTCTGCCTCGCCCACCTACGACGTCCGGGAGGCAGAGGCCGCCGTC
GCGGAGCTCCTCCGTGAGGGCGGCGCCTCCCCGGCCGACGCCGCCGCCATCGCCACGCGC
GCGCCGGCCTACGCCGCTATGCTCGCCGATGGCGTCCGCGAGCTGGACGAGCTCGGCCTC
TGGGCTTCGTGGAGCTCCGGTGCCGGGGCCCGGCTGAGCCTCAGCGGGGCCGTTGAGATG
GAGGTGGGGAGGCTCGGTTTCAGGAGGAAGGTGTACCTCATGGGACGGAGCAGACGTGAC
CACGGCGTGGTGCCGCTCCTCGAGAGCTTGGGGGTGCGTCTCTCCTCGGCCAAGCTCATC
GCGCCTTACGTCGCGGCTGCAGGCCTCACTGTGCTGATTGACAGGGTTAAGTTTTTGAAG
GAAATGTTATTTTCAAGCAGTGATTATGCAATACTAATTGGAAGGAATGCTAAGCGCATG
ATGATACACTTATCAATACCTGCAGATGATGCACTCCAAAGTACTTTATCTTTTTTTGAA
AAAATGGAGGCTAGGTATGGTGGTATTAGCATGTTGGGACATGGAGATGTGTCATTTCCT
TACCTCATTGAATCATTTCCAATGCTTCTTCTCTGCTCAGAAGATAACCATCTCAAGCCA
TTAGTTGATTTTCTGGAGCACATTGGAATTCCAAAGACAAAGATTGCATCAGTCCTGCTG
CTATTTCCTCCTATCATTCTTTCTGATGTTGAAAACGATATTAAGCCTAGGATTCGTGAA
TGGGAGAAGGCTGGCATGGAACAAGACTATATTGGTAGGATGTTGTTGAAGTATCCATGG
ATTCTTTCAACAAGTGTGATAGAGAACTACAGTCAAATGCTGTTATTTTTCAACCGAAAA
AAGAATGTTTTACTTTTCAGAGAAATGGGTGTTGATAAGAAAACAACAGGAAAGATTTTG
TGTCGTGCGCCTGAAATATTTGCTTCAAATGTGGATAGCACCCTCAAGAAGAAAATCGAC
TTTCTTATCAACTTTGGTGTTTCTAAACATCATCTTCCTCGCATCATTAGGAAGTATCCA
GAACTTTTATTGTTGGACATAAATCGTACATTGCTCCCCAGGATGAACTACCTATTGGAG
GTGGGTTTGTCTAAGAAAGATATATGCTCAATGATCTTTAGATTTTCCCCACTTCTAGGT
TACAGTATTGAGCTTGTTATGAAACCAAAGCTTGAGTTTCTGCTAAGAACCATGAAGAAG
CCACTTAAAGCAGTTGTAGAATACCCAAGGTACTTCAGTTATTCACTTGAGGGGAAGATC
AAACCGCGGTTTTGGGTACTGCAGAGTAGAAACATAGACTGCACTCTGACAGAGATGTTT
GCAAAGAACGATGAACTCTTTGCTGAAGAGTACTTGGGACTTGATGGATTGCTCGAGAAA
CCTCTACAATCAAGCATAGGCGGTTAATTTCTGGACTTATAAGATCAAACCATGCAGTGA
GCTATCGCAAAGCTGTGCAGCTTTATGCTTGGATTGATGAGGCTGTGGGAGGCCACTTTT
CCAGTGCTTAGTATTAAGAAGGTAATACTTGTTCTCTTGAAAGTTACAGGTACAAATATA
GATTGATGAGTGATGTTGTTAACTCAATACCAAAATAGCAAAGTATTGGGTTTTGAGAAT
ACTTCTTCATTCAAGGTGATGAAGAACTTGGTTTTCGCCATGCAAAGTCTTTCAATCTCA
ATGGTATATATTGTTCTTACAGGTTTAAGAAGAAATTACAAAGATGTGGTTTCCAACTAG
GAACAGAGAGAAGGATGCCCCACAACTTTGTGTGAATGCATGCAGGATCCGATGCAAGCT
GTTGTAAGGCCCAGGAAGTATACGTCAGGCAACCCAAGGTGTTACACTGACGCATCCACA
TCTCCAGATATACTACCACAGGTCTCCAGAAAAGCAGGACTAGGAGTGTTAATCATCAGC
AATCAAACAGGCATTGTATCGTCTGTTTACATCAAAGCATTGCTTAAGAACTCAACCTCG
GTATTAATGGTTGAGGCTGCAGCTCTGGCACTGGGAGCTCAATTGCTTCCCAAAATTGAT
GTCCAGCAACCGTCCTTTCTATCTGACAACCAAAAACTTGTGAGCTTCTTCAGTGGGAAG
GACCATAGTAATCCACCTCAATGGGAGATCAAACCTTTCACTCAAGGCTTCCAGCAACAA
CGCTAGGATCTTCAAGATAGATAGGATGCGTAATATTACAGCCCATATATTAGCTAACAA
GCTTTCAATTCCTCTAGTGAAAGCTCTGATGAATTACTAGCAACATGTACAAACCCTTTG
CATGTAAGAAGCCGTCCCTTTCTGACAGCTGCAAACTCTGTATAGTGATTCAATCACCCT
TGCAGCTGCATCTTGCTGGGAGAGAGGCGTGCGAGTAGTTGGTTAGGTTTTGAGGTGATA
GAATAAAGGTAGGTTTAAAACAT