Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU89911
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:67062789:67068872:-1 gene:SORBI_3002G293000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGGCCGCCTCGTCCGCGCCCTTCTTTGGGCTCGCCGACACGCAGATGCAGCCACAG
GCCGGTTCCTCCTCTCTGCAGCAAAACTCCACTGCCGCTCCCGATGTCGCGGCGCCGCCG
CCCAAGAAGAAGAGGAACCAGCCAGGCAACCCAAATCCTGACGCGGAGGTGATCGCGCTG
TCGCCGCGGACGCTGCTGGCGACGAACCGGTTCGTGTGCGAGGTGTGCAACAAGGGGTTC
CAGCGGGAGCAGAACCTGCAGCTGCACCGGCGGGGCCACAACCTGCCGTGGAAGCTGAAG
CAGAAGAACCCCAAGGACGTGCGGCGGCGGGTGTACCTGTGCCCGGAGCCGACGTGCGTG
CACCACGACCCGTCCCGGGCGCTGGGCGACCTCACGGGGATCAAGAAGCACTACTGCCGC
AAGCACGGCGAGAAGAAGTGGAAGTGCGACAAGTGCAACAAGCGCTACGCCGTGCAGTCC
GACTGGAAGGCGCACTCCAAGACCTGCGGCACCCGCGAGTACCGCTGCGACTGCGGCACC
CTCTTCTCCAGGAGGGACAGCTTCATCACCCACCGCGCCTTCTGCGACGCGCTGGCTCGT
GAGAGCGCGCAGATGCCGCCCCTGGGCGCCGGCCTCTACGCCGGCCCCGGCAGCATGAGC
CTCGGGCTCTCCGGCACCGTCGCCCAGATGCATGGCTTTGCAGACCAAGCCGGCCAGTCC
TCTTCAGCTGCAGCCGCGCAGTTTGACCACATCATGCCATCGTCCTCGGGCTCCAGCTCC
ATGTTCCGCTCTCAGGCGTCGGCCTCCTCGCCATCCTACTTCCTCGGCGGCGGCGCTCCT
CCTGCCGCCCAGGATTTCTCCGAGGACGGCTCCCAAGGCAGCCAGGGCCCTCTGCTGCAC
GGCAAGGCGCCCTTCCATGGCCTAATGCAACTTCCCGAGCAGCACCACCAGCCGGGGCCG
GGCAGCAGCAACGCCGCCGTCGCCAACGGTAACAACAGCCTCCTGAACCTTGGGTTCTTC
TCAGCTGGCAACAATGGTGGCACGTCCGGCAGCCAGGACGCGCGCCTTGTCATCCAAGAC
CAGTTCAACGTCACCGGCGGCGGCGGTGGAAGCGCAGAGCATGGCAACAACTTGATGGCG
TCCCTCGGAAGCCACCTCGGCGGAGGCTTCCCTTCCCTGTACAACAACTCATCGCCATCG
GCCGGGCTGGCCCAGAACTCGGCCACGGCGCTCCTGATGAAGGCGGCTCAGATGGGCTCG
ACGTCGAGCACCGCCCACAACAACGGCACTACTAGCACGCTGTTCCGTGCTGTAAGCTTC
AGCGCCGCCGCCGCCGCCGCCGCAAGTGGACAGGGGACAAGCAGGGCCGCAGGAGAAGGG
ACGACGACGTCTCACGAGGCACACTTCCATGAGCTCATCATGAACTCTCTGGCTGGCGGC
GGCGGCGCCGCCGGCACCGGCGGCTTCTCCGGCGCTACTGCAGGGTTCGGGGGCGTGGAC
GACGGCAAGCTGAGCACAAGAGACTTCCTCGGCGTCGGCAGGGGCGCCATGGCGCCGCCC
GGGCTCCACATCGGCGCCCTGGACCCGGCTCAGATGAAGTGA

Peptide Sequence

PEP ID

OQU89911
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:67062789:67068872:-1 gene:SORBI_3002G293000 transcript:OQU89911 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAASSAPFFGLADTQMQPQAGSSSLQQNSTAAPDVAAPPPKKKRNQPGNPNPDAEVIAL
SPRTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKDVRRRVYLCPEPTCV
HHDPSRALGDLTGIKKHYCRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYRCDCGT
LFSRRDSFITHRAFCDALARESAQMPPLGAGLYAGPGSMSLGLSGTVAQMHGFADQAGQS
SSAAAAQFDHIMPSSSGSSSMFRSQASASSPSYFLGGGAPPAAQDFSEDGSQGSQGPLLH
GKAPFHGLMQLPEQHHQPGPGSSNAAVANGNNSLLNLGFFSAGNNGGTSGSQDARLVIQD
QFNVTGGGGGSAEHGNNLMASLGSHLGGGFPSLYNNSSPSAGLAQNSATALLMKAAQMGS
TSSTAHNNGTTSTLFRAVSFSAAAAAAASGQGTSRAAGEGTTTSHEAHFHELIMNSLAGG
GGAAGTGGFSGATAGFGGVDDGKLSTRDFLGVGRGAMAPPGLHIGALDPAQMK

Transcript Sequence

Transcript ID

OQU89911
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:67062789:67068872:-1 gene:SORBI_3002G293000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GGTATGCATTGTACGCACGCCGTCGTCTCGTGGTCTCGGCCGGGGAGAATGAGAAACAGA
ACGGGCGCCCCCTGATCGGTCTACGCTTGCATCACCATCGGTGCGAGAGACCTGTGTGGG
CTCCAGTGGCCCCCACGCGCCGCGTGGGCCGTGCGACCACTCCACCTGCCGGTCGCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTCTCGACCCGCCAGGCCCCCGGCCGTGCA
TATATTAGGGAGAGAAGCAGGCAGCGCTGCCGCTGCGCAACCACTCCCACACCACCACTA
CTATTGCTGCTGCGGTCGGGGGCCGCGGGAGATATCCTAGACTGGGAGGGCCGCGCGGAG
GAGGAAAGCAACAAGCGGTAGGGCTCGCCTGTTCCTCCTGTTTGCTAGCTTGGTTTCGTT
CGATTCTCGCGCAAATTCCTCGGCGTTTTCTCGGTGTTCATCATCTTGGTTGCGCTATTT
TAATCGAATCCTGTCGGGTGCCCGATTATTCTCTCGTTGTTTTGGAGCGTTTGTTGCGGA
CGACGACGGAGAGCCCATCTGCTCCGATCCGATTCAACAAAGCGCTACTAGACTATTGCC
TTTCCCCAATCTCTCTCTTTCTAGGTCTAGCTATTATCTGTATCGATAGTCTGTTGCTTT
GCTCGTTTGAGCCATTTTCCTCTCCAGCCGCTTCTGATCTGAGCTTGTTGGCACGGCCGG
GTTTGATTTCGTTCTTTGGTTTCTTGCGGGCGTGTGCGTGTGTGAGTGCAACCTGTTTGT
CATCTCCCTTGCTTTGTTTGCTTGCACGGGGAAGGGATGGATATACGATGGGTGGTCTAT
TTGGTTCGGTGTGGCATGTTGTGGCGCACATACGCACAGATTTATCCACCCATCCGATCC
ATCCATCCTCTTGGCTTCCTTGCTTTGCTACACTGCTAAATCTTGGTCATCATATTTATT
ATCTCTTTGTTCTCACACGCTGTGTTCTCTTCTATGGTTTTCTTTTCTTGCTCTCCTCTT
TGTCTCTTTAGATCACCAGGCCACCAGATCTCTCGCTCGCAAGACGCCGGAATCCAGGCA
GATAGATACACGGCGCCGCCTGCCTGCCATGTCGTCGCCTCTCTCTGACTCGGACTGGTC
GTCGGTCACCTGAGAGCTAGTAGAGTCCAACGACGGACGGAGGAAGCTGCCAGTCACGCA
GCCGCCTCCGCCTGCTGTGATCGACCGAGTGCGCCAAAGGAGGAGCTAGCTGCGGCGGCC
GGTCCGCGCGTGTTTTCTTTCCTTCCGAGAGATGGCGGCCGCCTCGTCCGCGCCCTTCTT
TGGGCTCGCCGACACGCAGATGCAGCCACAGGCCGGTTCCTCCTCTCTGCAGCAAAACTC
CACTGCCGCTCCCGATGTCGCGGCGCCGCCGCCCAAGAAGAAGAGGAACCAGCCAGGCAA
CCCAAATCCTGACGCGGAGGTGATCGCGCTGTCGCCGCGGACGCTGCTGGCGACGAACCG
GTTCGTGTGCGAGGTGTGCAACAAGGGGTTCCAGCGGGAGCAGAACCTGCAGCTGCACCG
GCGGGGCCACAACCTGCCGTGGAAGCTGAAGCAGAAGAACCCCAAGGACGTGCGGCGGCG
GGTGTACCTGTGCCCGGAGCCGACGTGCGTGCACCACGACCCGTCCCGGGCGCTGGGCGA
CCTCACGGGGATCAAGAAGCACTACTGCCGCAAGCACGGCGAGAAGAAGTGGAAGTGCGA
CAAGTGCAACAAGCGCTACGCCGTGCAGTCCGACTGGAAGGCGCACTCCAAGACCTGCGG
CACCCGCGAGTACCGCTGCGACTGCGGCACCCTCTTCTCCAGGAGGGACAGCTTCATCAC
CCACCGCGCCTTCTGCGACGCGCTGGCTCGTGAGAGCGCGCAGATGCCGCCCCTGGGCGC
CGGCCTCTACGCCGGCCCCGGCAGCATGAGCCTCGGGCTCTCCGGCACCGTCGCCCAGAT
GCATGGCTTTGCAGACCAAGCCGGCCAGTCCTCTTCAGCTGCAGCCGCGCAGTTTGACCA
CATCATGCCATCGTCCTCGGGCTCCAGCTCCATGTTCCGCTCTCAGGCGTCGGCCTCCTC
GCCATCCTACTTCCTCGGCGGCGGCGCTCCTCCTGCCGCCCAGGATTTCTCCGAGGACGG
CTCCCAAGGCAGCCAGGGCCCTCTGCTGCACGGCAAGGCGCCCTTCCATGGCCTAATGCA
ACTTCCCGAGCAGCACCACCAGCCGGGGCCGGGCAGCAGCAACGCCGCCGTCGCCAACGG
TAACAACAGCCTCCTGAACCTTGGGTTCTTCTCAGCTGGCAACAATGGTGGCACGTCCGG
CAGCCAGGACGCGCGCCTTGTCATCCAAGACCAGTTCAACGTCACCGGCGGCGGCGGTGG
AAGCGCAGAGCATGGCAACAACTTGATGGCGTCCCTCGGAAGCCACCTCGGCGGAGGCTT
CCCTTCCCTGTACAACAACTCATCGCCATCGGCCGGGCTGGCCCAGAACTCGGCCACGGC
GCTCCTGATGAAGGCGGCTCAGATGGGCTCGACGTCGAGCACCGCCCACAACAACGGCAC
TACTAGCACGCTGTTCCGTGCTGTAAGCTTCAGCGCCGCCGCCGCCGCCGCCGCAAGTGG
ACAGGGGACAAGCAGGGCCGCAGGAGAAGGGACGACGACGTCTCACGAGGCACACTTCCA
TGAGCTCATCATGAACTCTCTGGCTGGCGGCGGCGGCGCCGCCGGCACCGGCGGCTTCTC
CGGCGCTACTGCAGGGTTCGGGGGCGTGGACGACGGCAAGCTGAGCACAAGAGACTTCCT
CGGCGTCGGCAGGGGCGCCATGGCGCCGCCCGGGCTCCACATCGGCGCCCTGGACCCGGC
TCAGATGAAGTGATGGATCATGCATGGAATAATGAAGAGCAACAATGCAAGACAACAACA
AGAAAATGCAAGAAGGTCAATAAACAGACGATGATCATCATGCACGTGAAGGCTAGCTTT
CCCGCGCATGCATGGAACGGTAAGCTAGTGTGGGCCGATCTCAGGGAGATCGAGTAAAAC
TGTTAAACTAGTTTCGTTTTCGTTAATTTCCGTGTTCATATGCTGCTGGTGGCTGCATGC
AACTTGTTGGTTTTCGTCATTTCCGTACATTTTTGTGGTGTTTTTCAAAGTGTTTAGACA
CTATTTTAAATTTGGCTGGCGATGGTGGTCTCTCCCCTGATGGCACAAGCTCATCATGTG
GAGGCCGGGCCAGAGACCAGAATCTAAGCAGGATGCTTTGGACGTTT