Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU89761
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:64518733:64523980:1 gene:SORBI_3002G259800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTGATATGAGGAGCTGTTATGATAACTTGCTTTCTGTTGCTGCAGCAATTGCAAAT
AGTGCATATGAGTTCTCTGAAGCACTTCAAGAAATGGGAACTTGTTTGCTTAAAAGAGTT
ACGCCAAATAAGGATGGAATAAATGATAAAGTTTTGCTGTTGCTTGGGAAATCACAATTT
GAACTTCGGAAACTTGTAGATAGTTATCGTGTGCATGTTCTTAATACCATCACCACTCCA
TCGCTGTCGCTTCTTAATGAGCTTCAAACTGTGGAGGAAATGAAGCGCCAATGTGATGAA
AAAAGAGAATTGTACGAATTCATGCTAAATGCGCAGAAAGAAAAGGGGAGGTCTAAGAAT
GCTAAAGGTGATAATGGAGCATCAGAGCAATTGAAACAAGCTCAGGAAGATTATCAAGAG
GAAGCAACTCTTTTTCTATTCCGGTTGAAGTCATTGAAGCAAGGACAGTTCCGAAGTCTT
TTCACACAAGCTGCTCGCCATCATGCTGCACAGCTAAATTTGTTCAGAAAGGGTGTCAAG
TCCCTTGAGGCTGTAGAGCCACATGTTAGGCTTGCTGCTGAGCAGCAACACATTGATCAT
CAGTTCAGCGCACTTGAGGAAGAAGATTACCTTGTTGAGGATGAGAATGATGATGATTAC
AATGACAGTCATGATGGAGAGTTGTCTTTTGATTATGGAGAAAATAAGGAAGCTGAGGAA
TCTGGCAATGTTTCTAGGAATCATACAGAGGAATTTTTTAATAGGAGCAAAGAAGAGTAT
TCTTCTGTTCCACATGAAAGACAAAGAATCGTAAGTCAGTCAGCACCACTTTTTCCTGAG
AAAAAGCTCAATACAGAAGAGAGAATAAAAGATTTGCGGCGTTCTGCGACAAGGAAGTTA
AATACTTATGTTTTGCCTACTCCAAATGACGTTCGAGCTACTTCTCAGATAGCATCAGGA
AATCCTACTTCTGGACCACTCGAGAGCAAAGGTGCCTTCCACTCATCTCCACTCCACCCA
TCTGCAGACAATAAACTACCTAGTCCTACAAGATTGTCTAATGTACAGTCTGTGCTGAAA
GAGAGCAACACCAATACAGCAGAAACAAGGAAAGTACTCCCAGTGTCTGATCTGGCTTTA
CCTGGGTATTATGACTTGAAGACTTCTGACAACAAAAAAGTGAAAAGAGGGTCATTTTCT
GGCCCAATAGCTTCCAGACCTCGGTCAACAGAGAACATTGATGTTATTTCTGCAGCGCCT
AGGCATAGCTCTGCACATCAGCCAGTGCACATGAGAGTATCCCCCGGCAACTCGCCACCA
CCCATTTCCTCACCGAAGATCAAGGAACTTCATGAGCTTCCTCGGCCACCTGTTAATGCA
TCAAAAAATACAACATTTCCCAGTTTAGTTGCCCACTCTGCCCCATTGGTACCAAATCCT
GCATCTTTGACACCCAAAGTTCAAGATCATTTTAGGGCAAGGCAAACACTGCCAAGTACT
GCTTCACCTTTACCAACTCCACCGCCTGGATCTATAGCCCGCAGTTTCTCTATACCTTCT
AGGGGGAGAACATCAGGTATTTCAGACAGTAAAGAGACAGATGATCAGCAAGACAAGGGA
GCTGCCAGAATGAGCCTTTCTTCTCTTCCTTCAGCAGAAACATTCTTGGAAGATCGTCAG
CCGTTGTCAGCAGCTGCCGAATCGGTTAGCAAAACATAG

Peptide Sequence

PEP ID

OQU89761
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:64518733:64523980:1 gene:SORBI_3002G259800 transcript:OQU89761 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MADMRSCYDNLLSVAAAIANSAYEFSEALQEMGTCLLKRVTPNKDGINDKVLLLLGKSQF
ELRKLVDSYRVHVLNTITTPSLSLLNELQTVEEMKRQCDEKRELYEFMLNAQKEKGRSKN
AKGDNGASEQLKQAQEDYQEEATLFLFRLKSLKQGQFRSLFTQAARHHAAQLNLFRKGVK
SLEAVEPHVRLAAEQQHIDHQFSALEEEDYLVEDENDDDYNDSHDGELSFDYGENKEAEE
SGNVSRNHTEEFFNRSKEEYSSVPHERQRIVSQSAPLFPEKKLNTEERIKDLRRSATRKL
NTYVLPTPNDVRATSQIASGNPTSGPLESKGAFHSSPLHPSADNKLPSPTRLSNVQSVLK
ESNTNTAETRKVLPVSDLALPGYYDLKTSDNKKVKRGSFSGPIASRPRSTENIDVISAAP
RHSSAHQPVHMRVSPGNSPPPISSPKIKELHELPRPPVNASKNTTFPSLVAHSAPLVPNP
ASLTPKVQDHFRARQTLPSTASPLPTPPPGSIARSFSIPSRGRTSGISDSKETDDQQDKG
AARMSLSSLPSAETFLEDRQPLSAAAESVSKT

Transcript Sequence

Transcript ID

OQU89761
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:64518733:64523980:1 gene:SORBI_3002G259800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TGCTCGTGGCTTCATTTCAGCTCAACTTTCTGTGGTTACTTGGCAGAGTCATGTTTGCTT
TTGTTTCCGTTGGGATGCATTTTCTCCTGTTCGATGGGGTGGTAGTTGAGTGATTATCTT
GCATTGATGGTTGTGTGTGGTGTCCCTTTGGTGCTAGAAACATTTAAGCATTAGGCAGGT
CTTTCTGCACTAGTGTAGTGCGGCAGGCAGCAGAACTTGTGATACTTCTCGATTCCTTGC
AGTAAATGAAGGTGTCATTTTGCTCAATTGGGACCTTGTCTCATCGAGTTGGATCTGACA
AATGGGTGCCCCATTCCCAATCAGTTTGTCCAGAAGTCTTCAATTGTTAAGAATTGAACT
ATTTTGTGTGGGTGTCCTGAATATCAAAACAGTGATAACCTAGTCCTGCTGTGTACCAGC
TGTATAGCTTCATCAGAATACAATTATGGATGATGTTAAAACTTCAAATGTTTTAAATTC
TGGGTCCGCATCCTGCTAGTTTTGTTCTGAACTGTTGCTTTCTTTGACAGGATATGGCTG
ATATGAGGAGCTGTTATGATAACTTGCTTTCTGTTGCTGCAGCAATTGCAAATAGTGCAT
ATGAGTTCTCTGAAGCACTTCAAGAAATGGGAACTTGTTTGCTTAAAAGAGTTACGCCAA
ATAAGGATGGAATAAATGATAAAGTTTTGCTGTTGCTTGGGAAATCACAATTTGAACTTC
GGAAACTTGTAGATAGTTATCGTGTGCATGTTCTTAATACCATCACCACTCCATCGCTGT
CGCTTCTTAATGAGCTTCAAACTGTGGAGGAAATGAAGCGCCAATGTGATGAAAAAAGAG
AATTGTACGAATTCATGCTAAATGCGCAGAAAGAAAAGGGGAGGTCTAAGAATGCTAAAG
GTGATAATGGAGCATCAGAGCAATTGAAACAAGCTCAGGAAGATTATCAAGAGGAAGCAA
CTCTTTTTCTATTCCGGTTGAAGTCATTGAAGCAAGGACAGTTCCGAAGTCTTTTCACAC
AAGCTGCTCGCCATCATGCTGCACAGCTAAATTTGTTCAGAAAGGGTGTCAAGTCCCTTG
AGGCTGTAGAGCCACATGTTAGGCTTGCTGCTGAGCAGCAACACATTGATCATCAGTTCA
GCGCACTTGAGGAAGAAGATTACCTTGTTGAGGATGAGAATGATGATGATTACAATGACA
GTCATGATGGAGAGTTGTCTTTTGATTATGGAGAAAATAAGGAAGCTGAGGAATCTGGCA
ATGTTTCTAGGAATCATACAGAGGAATTTTTTAATAGGAGCAAAGAAGAGTATTCTTCTG
TTCCACATGAAAGACAAAGAATCGTAAGTCAGTCAGCACCACTTTTTCCTGAGAAAAAGC
TCAATACAGAAGAGAGAATAAAAGATTTGCGGCGTTCTGCGACAAGGAAGTTAAATACTT
ATGTTTTGCCTACTCCAAATGACGTTCGAGCTACTTCTCAGATAGCATCAGGAAATCCTA
CTTCTGGACCACTCGAGAGCAAAGGTGCCTTCCACTCATCTCCACTCCACCCATCTGCAG
ACAATAAACTACCTAGTCCTACAAGATTGTCTAATGTACAGTCTGTGCTGAAAGAGAGCA
ACACCAATACAGCAGAAACAAGGAAAGTACTCCCAGTGTCTGATCTGGCTTTACCTGGGT
ATTATGACTTGAAGACTTCTGACAACAAAAAAGTGAAAAGAGGGTCATTTTCTGGCCCAA
TAGCTTCCAGACCTCGGTCAACAGAGAACATTGATGTTATTTCTGCAGCGCCTAGGCATA
GCTCTGCACATCAGCCAGTGCACATGAGAGTATCCCCCGGCAACTCGCCACCACCCATTT
CCTCACCGAAGATCAAGGAACTTCATGAGCTTCCTCGGCCACCTGTTAATGCATCAAAAA
ATACAACATTTCCCAGTTTAGTTGCCCACTCTGCCCCATTGGTACCAAATCCTGCATCTT
TGACACCCAAAGTTCAAGATCATTTTAGGGCAAGGCAAACACTGCCAAGTACTGCTTCAC
CTTTACCAACTCCACCGCCTGGATCTATAGCCCGCAGTTTCTCTATACCTTCTAGGGGGA
GAACATCAGGTATTTCAGACAGTAAAGAGACAGATGATCAGCAAGACAAGGGAGCTGCCA
GAATGAGCCTTTCTTCTCTTCCTTCAGCAGAAACATTCTTGGAAGATCGTCAGCCGTTGT
CAGCAGCTGCCGAATCGGTTAGCAAAACATAGGGTGAGTTTTCACTACCTGTGATGTTAT
AACCTCACAGTTTTTTAACATTGGTGCACCTGCAGCCTCCACAGGAAGCTGCTGTTCTAT
GTTCATTGATCATAATAATAATATAGAAAGTAAGACAAAGTTGAATAATCCTTTTTTAAG
GAAAAAATGCAAAACAGATACAAAGCTGACATGTGAGGGAAGCAAGCAATATGAGGTTGG
GTTGTATGAGCTTCTAGCAGTTGGATGTTCTCATAGGTCATGACAGAAGACATTCATAAC
TGTATTTTTATATTTGTAACATAACTTTGCAATTTTTTCTCCATGTAGTTCATCAATTCC
CTTGGGTTCTGCAAACACATAAAACACAGGGTCCCAGCATATAATAAGAAATGCACCAAA
CATTTCCTTCCATTTTAACCAAAAAACTAGCTGTAGATACCTGCTTGGTGCTTCAACAGC
AGTGCAGCAATGTTGGACTGACCTTATTCCCTATTACCTTCCATGTGCAGAGTATTAAGT
GTGAAGGTGGATTATTATCATTATCAAAATGGCTTGCTGAGCCCTCTTCCTGGAAGAATG
TTGTACATATTAGCATGTGAACTCTGGCCAGTATCGCGGAAGTAGTTGGTGTTTCGCGTG
CCCTTTGGTTAAGATGTAGTCTTTGCAAATAATGGGTTTGCGGAAATAAAATCCCCATTT
TTCCCACCGATTGATTGGCGCGAGATTTGTTGTTGTGCCCTTGAACTTGTTTGCCTTGAA
GCGAGTTCAGAGTGCCTGCCATCTGTTTTCCGCAGTAGACCTGGGTTTCTTGTGCTTATG
TAATTATCACCTGGTTTCCTGTGCTTATGTAATTATCATCTGTTTCACCACCCCCAAGGG
CTGTGTTGCCGTATTGGCTCTACATAGACCTGGGTTCGGTTTGGCTCCACAATTGCTACT
TCATGACTCGGCGAACAGCAACGTTTT