Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU89472
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:58674144:58678481:-1 gene:SORBI_3002G197500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCGTCTCTGATTTCCCCCTACCTCTCCGTCCCCACCGCCCCCGGGCACGCGCGCCTT
GCTGCTCCGGCGGCGCCGCGGCGGCGGAGGATGGCGGTGGTGAGGGCGAAGATTCGGGAG
ATATTCATGCCGGCTCTGAGCTCGACGATGACGGAGGGCAAGATCGTCTCCTGGACGGCA
GCCGAGGGGGACCGCGTGGCCAAGGGCGACCCCGTGGTGGTCGTCGAGTCCGACAAGGCC
GACATGGACGTGGAGACGTTCCACGACGGCATAGTCGCAGTCGTCCTCGTCCCGGCCGGT
GAGACCGCCCCCGTAGGCGCCCCTATCGCCCTCCTCGCCGAGTCAGAGGAGGAGGTCGCG
CTGGCGCGGGCGCGCGCTCAGGCCCTCTCGCAGGGACAAAGCCAGGAACCCTCTCCTCCC
CATGCCGCCGCCGCCCCCGTCTCGGGGACACCTCCTCCAGCGCCTGTGGCGGCTCCAGTG
ACAAAGGGCATCGCGACACCTTACGCCAAGAAGGTCGCGAAGCAGCACAGGGTGGACATC
GCCGGGGTTGTCGGCACCGGGCCACACGGCCGCGTCACGGCGGCTGACGTCGAGGCAGCT
GCTGGCATCAAGCACAAGCGAAAGGTCGCGCCCCCTCCACCTCCACCCCCTGCTGCTGTT
GGCCCTGCGCCACCAATGCCCGCAAGTGCGGTGCTGCCACCAGTGCCCGGTGGCACGGTG
GTGCCGTTCACGACAATGCAGGCGGCGGTGAGCAGGAACATGGTGGACAGCTTGAGTGTG
CCAACGTTCCGGGTTGGCTACTCCATGATCACTGACAAGCTTGACGCACTCTATGAAAAG
GTCAAGTCGAAGGGGGTTACCAAGACAGTGCTGCTGGTGAAGGCGGCAGCTGTGGCGCTC
ACCCAGCACCCTGTAGTAAATGCTAGCTGCAGAGATGGAAAGAGCTTCTCCTACAATAAC
AGTGTCAACATTGGAGTGGCTGTTGCACTCGAGGGTGGCCTTCTTACTCCAGTATTGGAG
GATGCTGATAAGCTGGATATATATCTGCTTGCGCAAAAGTGGAGAGTGCTGCTCAAGAAG
GCACGCATGAAGCAGCTGCAACCAAATGAATACAACTCTGGGACATTTACACTATCCAAT
TTGGGTATGTTTGGGGTGGATAAATTCGATGCAATCCTTCCAGCTGGTCAGGGGGCTATC
ATGGCTGTTGGAGCATCAAGACCAACTGTAGTGGCTGACAAGGATGGTTTCTTTAGTATC
AAGAGTGAAATGCTGGTGAATGTTACTGCTGATCACAGGATTATCTATGGTGCTGATTTG
GCAGCATTCCTGCAAACATTTGCAAAGATTGTTGAGGATCCTGAAAGCCTCACATTGTAA

Peptide Sequence

PEP ID

OQU89472
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:58674144:58678481:-1 gene:SORBI_3002G197500 transcript:OQU89472 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MASLISPYLSVPTAPGHARLAAPAAPRRRRMAVVRAKIREIFMPALSSTMTEGKIVSWTA
AEGDRVAKGDPVVVVESDKADMDVETFHDGIVAVVLVPAGETAPVGAPIALLAESEEEVA
LARARAQALSQGQSQEPSPPHAAAAPVSGTPPPAPVAAPVTKGIATPYAKKVAKQHRVDI
AGVVGTGPHGRVTAADVEAAAGIKHKRKVAPPPPPPPAAVGPAPPMPASAVLPPVPGGTV
VPFTTMQAAVSRNMVDSLSVPTFRVGYSMITDKLDALYEKVKSKGVTKTVLLVKAAAVAL
TQHPVVNASCRDGKSFSYNNSVNIGVAVALEGGLLTPVLEDADKLDIYLLAQKWRVLLKK
ARMKQLQPNEYNSGTFTLSNLGMFGVDKFDAILPAGQGAIMAVGASRPTVVADKDGFFSI
KSEMLVNVTADHRIIYGADLAAFLQTFAKIVEDPESLTL

Transcript Sequence

Transcript ID

OQU89472
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:58674144:58678481:-1 gene:SORBI_3002G197500 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

CGGGCCCACACTGCAGTGGGCTGGCCAACCTTCACCTAACGCACTGGTTCGTCTCCCACT
CTCCCACCTCGCGCCGCCGCGGCGCTCGCCGGATTCCGCCGCCCAGCCCGCGTTCTCCTC
GACCCAACCGAGTCCTGAGAGACGGACCATTTCTTCAGTGATCATCCACCAGTGCGCCAT
GGCGTCTCTGATTTCCCCCTACCTCTCCGTCCCCACCGCCCCCGGGCACGCGCGCCTTGC
TGCTCCGGCGGCGCCGCGGCGGCGGAGGATGGCGGTGGTGAGGGCGAAGATTCGGGAGAT
ATTCATGCCGGCTCTGAGCTCGACGATGACGGAGGGCAAGATCGTCTCCTGGACGGCAGC
CGAGGGGGACCGCGTGGCCAAGGGCGACCCCGTGGTGGTCGTCGAGTCCGACAAGGCCGA
CATGGACGTGGAGACGTTCCACGACGGCATAGTCGCAGTCGTCCTCGTCCCGGCCGGTGA
GACCGCCCCCGTAGGCGCCCCTATCGCCCTCCTCGCCGAGTCAGAGGAGGAGGTCGCGCT
GGCGCGGGCGCGCGCTCAGGCCCTCTCGCAGGGACAAAGCCAGGAACCCTCTCCTCCCCA
TGCCGCCGCCGCCCCCGTCTCGGGGACACCTCCTCCAGCGCCTGTGGCGGCTCCAGTGAC
AAAGGGCATCGCGACACCTTACGCCAAGAAGGTCGCGAAGCAGCACAGGGTGGACATCGC
CGGGGTTGTCGGCACCGGGCCACACGGCCGCGTCACGGCGGCTGACGTCGAGGCAGCTGC
TGGCATCAAGCACAAGCGAAAGGTCGCGCCCCCTCCACCTCCACCCCCTGCTGCTGTTGG
CCCTGCGCCACCAATGCCCGCAAGTGCGGTGCTGCCACCAGTGCCCGGTGGCACGGTGGT
GCCGTTCACGACAATGCAGGCGGCGGTGAGCAGGAACATGGTGGACAGCTTGAGTGTGCC
AACGTTCCGGGTTGGCTACTCCATGATCACTGACAAGCTTGACGCACTCTATGAAAAGGT
CAAGTCGAAGGGGGTTACCAAGACAGTGCTGCTGGTGAAGGCGGCAGCTGTGGCGCTCAC
CCAGCACCCTGTAGTAAATGCTAGCTGCAGAGATGGAAAGAGCTTCTCCTACAATAACAG
TGTCAACATTGGAGTGGCTGTTGCACTCGAGGGTGGCCTTCTTACTCCAGTATTGGAGGA
TGCTGATAAGCTGGATATATATCTGCTTGCGCAAAAGTGGAGAGTGCTGCTCAAGAAGGC
ACGCATGAAGCAGCTGCAACCAAATGAATACAACTCTGGGACATTTACACTATCCAATTT
GGGTATGTTTGGGGTGGATAAATTCGATGCAATCCTTCCAGCTGGTCAGGGGGCTATCAT
GGCTGTTGGAGCATCAAGACCAACTGTAGTGGCTGACAAGGATGGTTTCTTTAGTATCAA
GAGTGAAATGCTGGTGAATGTTACTGCTGATCACAGGATTATCTATGGTGCTGATTTGGC
AGCATTCCTGCAAACATTTGCAAAGATTGTTGAGGATCCTGAAAGCCTCACATTGTAAGG
AAAGTTTCATACAGCTGTTCTCAATTTTCTGTATTCACAATTGGAAGAGAATGCCAATAT
AGATAATAAAGAGATACCTTTTGATGTTTTCTCCAATTAGAGAAATTTGTGTACAGTTTA
TACAGAACTCAAAACCTGGATGCTCATTTTCAATTCGCATTTATCGTTTCAAGAAACCAT
TAATAGTATAAACACTTGGGTAGCATTAATAATGATAGAGGATGCTTCCTGTACAGTATC
TTGTTTGTGTCTAACTGGATGATACTACTAATTCGCAAGAAATTCAGCAAAATCATTTTT
TCCTGTTTTGAGCATAGTTAAAGCAAAAGAGCATAGCCTCTCTGGTTGCATCAGATGGAC
TTTTAGAACGGTACTGAAATTTTCTGGCTACTTCAATAAGCCGCCTTACAGTTACAGAAC
AAAATGATGCAGGATTCCTAAGTTACAAGAAGGTAAAACATGCCAGGCACATGCTTACAT
CCTCTGAGGCGGGCCTGCCTTGCCGTTGCTGAAGAGAATGACAAGCAGGCCTAGAGCTCC
AGAGCACGCAGTGGTGGCGTGGCTCCTTCAGGGCATGTGGCCGGGGGCGCCCTCTGGGGC
GGGCGGTGAGACCTCGCTGACGTCGAGGATCTCGACGCGGCGGTTGGTCCGCTTCCTGAT
CTTGATGGCCACGTCCTGCGGGCTGAAGACGCCGCACACTATGACCCGGCCGTGCTTCTT
GTCGATCAGGTGGCTCTCCAGCTCTGCAAAAAAAGTCCAAAAATAAAAGGTTCAGACAAG
TCTCCCAAACAGAGGTTTCAGGCGTCATCACAGAAGGGCAGCTGGAGTGTCTACCTTGCA
TCTGGAGGAGCGCCCTCCTGATCCTCTGGTAGCACCCGTTGCAGTCGATGTTCATCCTCA
GGGTCATGCAGTAGGGCTGCTGCAGAGTACAGGGCACACGTCAGTCACTAACTGCCTCTC
AAAGTTTCAGCTCTCGAAAACCATTTTGCTAGGACTGACAGAACATAACATAAAACCATC
ATGGTAGCACTCACCCTGTAGTCCATGGAGACAGATCGAGGAGCTCTTCTCCCCTTGGCG
GCGAGGCGGCGACGCGACGGCGACGCGGCTTCGACTGGCCGGAGGCGAGGTGCAGAGTGT
GAAAAGGCCCCAGGGAGAGCGAGGACTGAGAGTTGTTAAGGGCAGCCAGCAGCGGAAAGG
ATGGGATTAGCGTGCGAGGCGTGGCTTGATGCTCGCTTTGGTGTGCTTTGCTTTGCTTAC
TGCCCCGGCTTGACTGCTTGTGAGCCTGATCTTTTATGGTCACTTCACTCGAGTGTGATT
CATTCCCGTGTGGGCTCGATCGATGTGCTTTCTGGGAATCAGATTCTGGGGCACCAGCAG
CGCAGGCTGGCTTCCATGCAGTGCCCTTTCCGCTTCCACACAGCTTTTGCTACGCCTGCT
GTTCTTTGGCTTGTTGATTTGGACGGAGGACCTGCCTATATGCTTTCGCATTTTTGTTAC
TCAGATTCAC