Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU89454
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:57963261:57967513:1 gene:SORBI_3002G193100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCAGACTGCTTCAGCTCATAGTTGGACATGCATGGATCTCTATGTTTTTGCAACACCA
TATAGGATAACATGGGACTATTATTTTGCTGCTCAGGAGCACACTTTGGAGATTAAATCA
TGGGAGGAACAAGCGGAATTGGAATATGTGAAGGAGCATGGCATTTCTGTTTTTCTCATG
CCATCTGGAATGCTTGGAACTTTGCTATCTTTGATTGATGTCCTGCCTTTGTTTTCAAAC
ACTGCCTGGGGCCAACATTCCAACTTAGCCTTTTTAAAGAAGCATATGGGAGCCTCATTT
GAGAAACGTTCCCAACCTTGGGTTGCTAATATTAGAAAGGAGGATATACAATCTGGTGAC
TTTTTGGCTCTATCAAAGATTCGAGGACGATGGGGCGGGTTCGAGACATTAGAGAAATGG
GTGACTGGTGCATTTGCTGGGCATACCTCGGTTTGCTTAAAAGACGAGAAGGGTGATCTT
TGGGTTGCAGAGTCAGGCTATGAAAACGAGAAGGGAGAAGAAATCATTGCAATAGTTCCT
TGGGATGAATGGTGGGCCATGGCCCTAAAGGATGAATCAAATCCTCAGATAGCCCTGCTT
CCTTTGCACCCTGATGTACGTGCCAGATTCAACGAAAGTGCTGCATGGGAATATGCCCAG
AGCATGGTTGGACAACCTTATGGCTATCATAACATGATATTTAGCTGGATCGATACAATA
GGAGATAATTATCCACCTCCTCTTGATGCTAACCTGGTAATGGCAGTTATGTCAATGTGG
ACTAGGTTGCAGCCAGTTTATGCTGCAAACATGTGGAATGAAGCCCTAAACAAACGACTT
GGCACTGAGGGTTTGGACCTTCAGGGGATCATTATTGAGACTGAAAGACGTGGAATGTCT
TTTGATCAGTTGCTCACCATACCCGAGCAAGACGAATGGGTATACAGTGATGGTAAATCA
ACTACTTGTGTTGCCTTCATTCTTGCAATGTATAAGGAGGCTGGAATATTCGCCCCTTTC
TCGGAGTCGATCCAGGTCACCGAGTTCACTATTCGTGATGCATACATGCTCAAGATTTTT
GAAGACAACCCGGCAAGGCTTCCAAGCTGGTGCAACACAGACACGGACAAGCTTCCCTTT
TGCCAGATTCTCGGAGAGTACAGAATGGAGCTTCCAGAGTACAACACGATTGAACCTTAT
GCGAAAATGAACGAGAACTGTCCGTCCTTACCTCCAACATACAAACGACCCGCACGCTGC
TGA

Peptide Sequence

PEP ID

OQU89454
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:57963261:57967513:1 gene:SORBI_3002G193100 transcript:OQU89454 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MQTASAHSWTCMDLYVFATPYRITWDYYFAAQEHTLEIKSWEEQAELEYVKEHGISVFLM
PSGMLGTLLSLIDVLPLFSNTAWGQHSNLAFLKKHMGASFEKRSQPWVANIRKEDIQSGD
FLALSKIRGRWGGFETLEKWVTGAFAGHTSVCLKDEKGDLWVAESGYENEKGEEIIAIVP
WDEWWAMALKDESNPQIALLPLHPDVRARFNESAAWEYAQSMVGQPYGYHNMIFSWIDTI
GDNYPPPLDANLVMAVMSMWTRLQPVYAANMWNEALNKRLGTEGLDLQGIIIETERRGMS
FDQLLTIPEQDEWVYSDGKSTTCVAFILAMYKEAGIFAPFSESIQVTEFTIRDAYMLKIF
EDNPARLPSWCNTDTDKLPFCQILGEYRMELPEYNTIEPYAKMNENCPSLPPTYKRPARC

Transcript Sequence

Transcript ID

OQU89454
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:57963261:57967513:1 gene:SORBI_3002G193100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GTCCCTGCCTCTTGATTCTTGTTTTCCTCGTTCTGGAAATAGGGTCGCGTTAGCTTCCAT
GATTTGTTTGAATTAGGCGGGATTGCTTGGGTATGCTGTTTGCAATCTGGTGAAGTATAA
GCTTACGTAGTGTTGGGCTGTTGGCAACTGTTGTCTGTTGACTTGAGGTGGTGATACGGG
CAATCACTTCATAGGTGTTGATTGTGTCGAGAACAATTTAGTTGGGAGTTGGGACCGTGA
TAAATAGCTCAAGTTCCTTCGTAAACATGGCTTCATTATATGTTAAAATTGGGAGTGTTG
GGCGATACTCAATTGGCATGCTATGGGGGGAATGTTTTATAAATCATAACTGAAGACTCG
ATGTAGTTTTGTTGTGTGGATGTGATTGAGTGGTACTTTGGGGAAGTAAAGTGCTGAGCT
CTTGTACCATGTAATGTAAGAATCACTTCTCTTTTTGGTTGGGCTAGAGAATATTTCTGT
TTTTTGTGGCAAATTCTTGCTTCATTTGGTCATTTTAAGGCTATATTGATAAATGATAAT
GAGGTGGACCCTGCAATTTTTCTTTCTTGTCTCCTTTTAGAGAGATTCCTCTTGTTAGGC
CCAAATATTCTTAGCTTTCTAATGAACTTACAATTTAGTTCATTTGATGACCAGTCCTCG
AACATTGAGGAATCAGATTCACTTTGTTGTTTTGTTACAATAATATGAAACCATTTAACC
ATTTATCATACCGTAAATGCTGCAAAAATCTACATTTCCTGCCATCTCAGAAGTTTAAAC
TGGCATGTGCTTGTTAGATAAACAATGGCCAACATAGTTAGCGGTGAATCCCTTGCTTAA
TCTGCACTCATGGACAAGACCATTTATTTAGATTGGTCGTTTTATATATGATGATCAGGG
TCATTTACATGAGTGAAGTTGTTTTTTCCTTTGTTTATGCAGACTGCTTCAGCTCATAGT
TGGACATGCATGGATCTCTATGTTTTTGCAACACCATATAGGATAACATGGGACTATTAT
TTTGCTGCTCAGGAGCACACTTTGGAGATTAAATCATGGGAGGAACAAGCGGAATTGGAA
TATGTGAAGGAGCATGGCATTTCTGTTTTTCTCATGCCATCTGGAATGCTTGGAACTTTG
CTATCTTTGATTGATGTCCTGCCTTTGTTTTCAAACACTGCCTGGGGCCAACATTCCAAC
TTAGCCTTTTTAAAGAAGCATATGGGAGCCTCATTTGAGAAACGTTCCCAACCTTGGGTT
GCTAATATTAGAAAGGAGGATATACAATCTGGTGACTTTTTGGCTCTATCAAAGATTCGA
GGACGATGGGGCGGGTTCGAGACATTAGAGAAATGGGTGACTGGTGCATTTGCTGGGCAT
ACCTCGGTTTGCTTAAAAGACGAGAAGGGTGATCTTTGGGTTGCAGAGTCAGGCTATGAA
AACGAGAAGGGAGAAGAAATCATTGCAATAGTTCCTTGGGATGAATGGTGGGCCATGGCC
CTAAAGGATGAATCAAATCCTCAGATAGCCCTGCTTCCTTTGCACCCTGATGTACGTGCC
AGATTCAACGAAAGTGCTGCATGGGAATATGCCCAGAGCATGGTTGGACAACCTTATGGC
TATCATAACATGATATTTAGCTGGATCGATACAATAGGAGATAATTATCCACCTCCTCTT
GATGCTAACCTGGTAATGGCAGTTATGTCAATGTGGACTAGGTTGCAGCCAGTTTATGCT
GCAAACATGTGGAATGAAGCCCTAAACAAACGACTTGGCACTGAGGGTTTGGACCTTCAG
GGGATCATTATTGAGACTGAAAGACGTGGAATGTCTTTTGATCAGTTGCTCACCATACCC
GAGCAAGACGAATGGGTATACAGTGATGGTAAATCAACTACTTGTGTTGCCTTCATTCTT
GCAATGTATAAGGAGGCTGGAATATTCGCCCCTTTCTCGGAGTCGATCCAGGTCACCGAG
TTCACTATTCGTGATGCATACATGCTCAAGATTTTTGAAGACAACCCGGCAAGGCTTCCA
AGCTGGTGCAACACAGACACGGACAAGCTTCCCTTTTGCCAGATTCTCGGAGAGTACAGA
ATGGAGCTTCCAGAGTACAACACGATTGAACCTTATGCGAAAATGAACGAGAACTGTCCG
TCCTTACCTCCAACATACAAACGACCCGCACGCTGCTGACTATGAGATTGTCGTCTATGT
ATCTTTCTGCGGCTGCTGCGTTTACACAGTAGCAGTTGAGTGCTGTTGCTAAGTTGTTCT
GTAAATAAAAGACACTGTATATATAGGTGTTTGGTAGATGGTAGTTGTTACCAGTAACCT
AGCTACGACGTATTCAGGTAACAGGTTCACGGTTTTCAGTCGATCAGTTCTGAAGCCACG
GGGTCGGCGACCAATATGAGGGTTAGGATTTGCCCGCTCCCGAAAGTTGCTTATATGTAT
ATAGGCAACATTGTTACTTTATCTGTGGGCAATATTCTTGGTTATAATGTGTGAACTCCG
TCAAGAAATGAATCTACAATGCAACGTCATTTGATTCTGATATGTGACCTTACTGTCAAG
ATTACTACTTATTAACCTGTGCTCCAC