Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU89273
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:52550835:52554696:-1 gene:SORBI_3002G168000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGATCCTCGTCCTCCCATTGGGTTCTCAAATGGTAAGAGTTGTCCAAGTGAACCACCA
GGAAAGCCCAATCCGGTAAATTTGCATTCGCAGTTTCCACAGCAAATCTCATTTTCGCAT
CCATCGTATGTCCACCAGCAATTTCCACAGCAACACCTATATCCACAAAATGTCCAGTAT
GTTGTTGTTCAACCACAATATGCTCCATTCTCACTGCCACAACTACCACCTCAACCTGCT
GGGACTATGTCAATGCCACTGCCTGCATCAGCTGGAACTATGCCACTGCCTGCACTGCCA
CTTCAATCTCCAATTGCTGGAGCAGTGCCATTTACGCCTGTGTCATACTCAGGCACCCCG
CACTCTGTAACTGGTTCAGATTTACAAGACACTGTTAGTGTAGACAATGAAGAGAACACT
CAACCTGATAGGACTTCTAAGCGATTGCGATTGAATTGGACAGAATTGGAGGACTCAAGA
CTGATTAATGCTTGGTTGAATAGTTTCAAGCTGAATAGTTCGAGGAGGAATGACGTGTTC
TGGGGAGATGTCGCAAAGCTGTACAATAGCAGCACTCCAAAAGATCGGAGAAGGTCACGA
AAGCAATTGAAGCCCCACTGGCACAAGATTACCAAGAAGATGGCCCACTTCTATGACTGC
TGGTGCCAAGCTGAGAAGAAATATTCGAGTGTGCAATCTGATAAAATGCAAATGATGGAC
AAAACATGGGTAAAGTATGACGAGGAAGCAAGGGCAATGTACCTTGAGGAAGCAAAACAT
CATTTCACGTTGAGCCATCTTTGGAAAGTTGTCTGGGACCAACCCAAGTGGAAAAACTAC
ATCTCTTCATTATATTCCAAGGGTACCAAATTATCTGAGTCTGGAGACTCTACGTCATCC
TCTGAAGATGCCAATGATGTATCAGAAAAAGAAATAGATGAAAAAGATAGCATGTCTGCA
AAGAAGAAATGGGAAGGCAAAAGAAAGATGTCATCTCCTTCATTAGAGTTGCAACAAGGC
ATTCAAAGCTCAGTGGATCCTCAAAATGTGCTTGAGAAGAATAATTTAGTGGGAGACACT
TCGAGGCTCTATGAGTTTCAGCATGAGAAGGAGCAATTGATGGCTCGCACTTCGAGTTTC
AATGAATTTCACCATGGAAATTCAGTTAGGGAAGACATTCCTGAAAAGGGAAGACATCCG
CAAGATTGTAAAGTTCTAGAACATGCAATGACAGTGAGATGTGCTCCAGAAAAAGAAACA
CACCCACAAAGTTCCAAGATGGAAAAGGCCAAGTTGAAACGTAAAGGGAACATATCATAT
CCTTCCTCGGAGGTGCAGGAAGACATTAAACATGCAGTGGATCTACAGCGAATGCTTCAG
AAGGATCGTGAGAAGATGTCGGAGGTACAAATCCAACTCTCAAAAGAGAAGCTTGAGATG
GCAAGACTAAAGCACCAGGAAGCAAAGGAAAAGAAGGAAACAACACTCTATGAGAAGTAC
ACTGAGCTATTGATGGCTGACACTAAGAGGTTCAACGATTTTCAGAAGGAAGAGCATCAA
AAGGCAGTGAAGTGCATGGGTGTGATGCTATTTGGTAAAGATGGTAAGTAA

Peptide Sequence

PEP ID

OQU89273
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:52550835:52554696:-1 gene:SORBI_3002G168000 transcript:OQU89273 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MDPRPPIGFSNGKSCPSEPPGKPNPVNLHSQFPQQISFSHPSYVHQQFPQQHLYPQNVQY
VVVQPQYAPFSLPQLPPQPAGTMSMPLPASAGTMPLPALPLQSPIAGAVPFTPVSYSGTP
HSVTGSDLQDTVSVDNEENTQPDRTSKRLRLNWTELEDSRLINAWLNSFKLNSSRRNDVF
WGDVAKLYNSSTPKDRRRSRKQLKPHWHKITKKMAHFYDCWCQAEKKYSSVQSDKMQMMD
KTWVKYDEEARAMYLEEAKHHFTLSHLWKVVWDQPKWKNYISSLYSKGTKLSESGDSTSS
SEDANDVSEKEIDEKDSMSAKKKWEGKRKMSSPSLELQQGIQSSVDPQNVLEKNNLVGDT
SRLYEFQHEKEQLMARTSSFNEFHHGNSVREDIPEKGRHPQDCKVLEHAMTVRCAPEKET
HPQSSKMEKAKLKRKGNISYPSSEVQEDIKHAVDLQRMLQKDREKMSEVQIQLSKEKLEM
ARLKHQEAKEKKETTLYEKYTELLMADTKRFNDFQKEEHQKAVKCMGVMLFGKDGK

Transcript Sequence

Transcript ID

OQU89273
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:52550835:52554696:-1 gene:SORBI_3002G168000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TTCTTGGCTGTTGGATCAGCCTGCGCATACCGCTTTACTTGATTCGATTTACTTTTAGAA
GTTGGAATAAACAGAACCGTTCTGTTGATTGGTATCCTAATACCATTAGGCGTCCGGGAT
CTCCGGGTAGGAGGAATTGGGGAGGAATTGTATTCGGGGATTGCAAGCGCTTGGATGAAT
TTGTACAGTAGGAATTGCAGTGTTACTATACATCGACCCATTAACTTAAATAAACGATCT
TGTAGGCGTCACTAGGAAAGTTTCGTCCCTCCTGTTCCGATGCTTGGAGACTGTCCTTAT
CTCGCACTTTAGTGAAAATGGCTCTCCCTCTCCCTCTGTTCTAATAAGTCCTTCTGGTTT
TTTTACGCACCTAGATATACATTATGTCTAGATACGTAGAAAAGCCAGAACTACTCACAG
TTTGAAATGGAGATGGAGGGAGTAGCATTTACCATGCTGTTGGACTTGCACTATCCTTAA
TGCCGTGTTGACATGAAGGGTAAAAGCAGACTAGCCATTCATAGATATATTGGACAATGT
TCAACTGAATTGATCCAATGATGCAGATATGGTCACACTGCCAATCATTTGTAGATCTGA
AGCTTTACTGCTGGCTTTCTCCAACTAATTAGAACAGATGATGCTTCTCATCGGTTTTTT
TATATCTGATCTGATGTTGCCACATTTAGATTTGAAAAATCTAGTTTATGAGATGATTAT
TTGCATGTCCAGTTGCATGTTACATGTATAGTGTTATGACATGAGGAACCAGTTACCTTT
TCTTTACTCGTTATGTTCTTCAAAGTAGTTGACCTAGATCTTGTTTTTTGTTGTTAACCC
CATATATTTGACTATATCAATGATTAGATTAAAATGCTTCAGAAATGTTCTGCAAGAACC
TGATATTGATTTTATTTACAACATGGCTAAAAGAGACTGCTCTAATTGGGCTACTGTTAT
TCAAAACCATTAGTTCTGCAGCACCAGCTTCAAATCAGTTCTTCTGATCTTAGAAAGGCA
CTTGCAAAGATATAATGAAGCTTCAGAAGTTCTCTATGATTGTCTACCTTCTTTTACCAC
TTGTCAGTCCTTAATAATAGCATGTTAGTTGGCTTTGTCCCAGAAAGGTATACCAGCACC
TGTTGCATACTTGCTACTCAAATTAAATGATTTGCTAAATCTTTCACAAATATGAAAAAA
AAATGTGATTAGGTCCATTCTTATCTTGTTAATTTTCCATTTCCTAGATCTGAGATAATT
TATTTTACTACTCTGTGTTGCTCCATTTTGCTGGGAGATTTTGAGGTCAGTGGTGGTTGA
AGAAAACATGCTTAATTTAGCATGTTGCCTAACTTCAAACAGCTCTAGGAATACTAATCC
AAAAGACGAGTCGTAATTTTCTATCTAGTTTTTATATCTCAAAGGAGCTTTTTCAAGTTA
TTGTGATACAACTTCTTTGCTATCTCCTACTAACCAATACAATGTTGTTACAAAATTCAA
CATCCTTGTTTGACAATTTATTTTCTCAGGAGTGTAACATCTACCAACACACAGTTACTA
GCCATTCTACTGTTAGCTCTGAGCTCCTTTGGTTTAGCGGAACATCAATCATGGAATTGT
TGACAGTCTTATTGTGGGGTTCAATGTCACAAACAGCCAAACAGGAAATATGGAAGTGAA
AACCCTCCCTTGAAAATGCAATTTGTAACATTTCATCTATATCTTGTTATAGAAAGATCC
ATAGAATCTAAGATGCAAATAATCTTATCTTCCTTATTTATCCTGGATTGCCCTACCATT
TGATCACACCAAGTTCCTCCCAAAGTGTCATTTCTATTTGGTTCCAATGGATCCTCGTCC
TCCCATTGGGTTCTCAAATGGTAAGAGTTGTCCAAGTGAACCACCAGGAAAGCCCAATCC
GGTAAATTTGCATTCGCAGTTTCCACAGCAAATCTCATTTTCGCATCCATCGTATGTCCA
CCAGCAATTTCCACAGCAACACCTATATCCACAAAATGTCCAGTATGTTGTTGTTCAACC
ACAATATGCTCCATTCTCACTGCCACAACTACCACCTCAACCTGCTGGGACTATGTCAAT
GCCACTGCCTGCATCAGCTGGAACTATGCCACTGCCTGCACTGCCACTTCAATCTCCAAT
TGCTGGAGCAGTGCCATTTACGCCTGTGTCATACTCAGGCACCCCGCACTCTGTAACTGG
TTCAGATTTACAAGACACTGTTAGTGTAGACAATGAAGAGAACACTCAACCTGATAGGAC
TTCTAAGCGATTGCGATTGAATTGGACAGAATTGGAGGACTCAAGACTGATTAATGCTTG
GTTGAATAGTTTCAAGCTGAATAGTTCGAGGAGGAATGACGTGTTCTGGGGAGATGTCGC
AAAGCTGTACAATAGCAGCACTCCAAAAGATCGGAGAAGGTCACGAAAGCAATTGAAGCC
CCACTGGCACAAGATTACCAAGAAGATGGCCCACTTCTATGACTGCTGGTGCCAAGCTGA
GAAGAAATATTCGAGTGTGCAATCTGATAAAATGCAAATGATGGACAAAACATGGGTAAA
GTATGACGAGGAAGCAAGGGCAATGTACCTTGAGGAAGCAAAACATCATTTCACGTTGAG
CCATCTTTGGAAAGTTGTCTGGGACCAACCCAAGTGGAAAAACTACATCTCTTCATTATA
TTCCAAGGGTACCAAATTATCTGAGTCTGGAGACTCTACGTCATCCTCTGAAGATGCCAA
TGATGTATCAGAAAAAGAAATAGATGAAAAAGATAGCATGTCTGCAAAGAAGAAATGGGA
AGGCAAAAGAAAGATGTCATCTCCTTCATTAGAGTTGCAACAAGGCATTCAAAGCTCAGT
GGATCCTCAAAATGTGCTTGAGAAGAATAATTTAGTGGGAGACACTTCGAGGCTCTATGA
GTTTCAGCATGAGAAGGAGCAATTGATGGCTCGCACTTCGAGTTTCAATGAATTTCACCA
TGGAAATTCAGTTAGGGAAGACATTCCTGAAAAGGGAAGACATCCGCAAGATTGTAAAGT
TCTAGAACATGCAATGACAGTGAGATGTGCTCCAGAAAAAGAAACACACCCACAAAGTTC
CAAGATGGAAAAGGCCAAGTTGAAACGTAAAGGGAACATATCATATCCTTCCTCGGAGGT
GCAGGAAGACATTAAACATGCAGTGGATCTACAGCGAATGCTTCAGAAGGATCGTGAGAA
GATGTCGGAGGTACAAATCCAACTCTCAAAAGAGAAGCTTGAGATGGCAAGACTAAAGCA
CCAGGAAGCAAAGGAAAAGAAGGAAACAACACTCTATGAGAAGTACACTGAGCTATTGAT
GGCTGACACTAAGAGGTTCAACGATTTTCAGAAGGAAGAGCATCAAAAGGCAGTGAAGTG
CATGGGTGTGATGCTATTTGGTAAAGATGGTAAGTAAGTTTCTTTTAGTAGGGCACCTCC
TTTTGTATATAGTGAATCCTCGAAATGTACTATTGGTGCTTATGCTTGTCAGTTTCGTTG
ATAACTTTTACCGAGGTGCAATCCTTGGAACGTATCTTCTTGGTTAACAGTGTGCTACAG
TTAGTTTCTGAATTTAAATTACTGAAAGGTACTGGGAGAACATAGTCGGTTTCCTTCCTT
TGAACCTATCTGTGCGATAAACAGCTTTGACAGCTATAACAGTATGTGTTCACTTTCAGA
CAAATGGATCGAATTGCTTCTGGTAATGTCTTCATATGTCTAGCTGTTTGCTAAATGGAG
TTGAG