Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU89260
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:51633326:51636814:-1 gene:SORBI_3002G165600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGTTGCGCTACAAGAAGGTCTGCATTTTCTGCTGCGATCCTGATGCAACTGATTCCTCC
GATGATGAGGATGATCAGACCTCCAAGAAAGAAAAGAAAATTATAAGAGAGGTTCTAGTT
CCCTTAAGGAAATATAAGACCTTGAGACCTCTAAAAGCCATTATGCCATGTCGAATAAAG
GATCTGAAAAGTCCAGAAAGGAAGGTACCATTGAGCAGGTACCGTGGTGTGCGCCTGCGG
GACTCTGGTCGGTGGCAAGCAGAGATTCGCAATCCTTTCACAAAGAAACGAGACTACAGT
TTACATGACACTGAGGAGGCTGCTGCTGCAACATATCAGGCAAAATGGTTCCAGTTCCAC
GCAGAGATGCTGGCAATAAAAGCTCAAGAGCCTGTGTCAAAACATGCAGCTTTGTCCAGC
TCATCCTTGGTTTCCTGTGCCTCTTCATCTGTGTTATGCAAGCAGAGCATACAAGAAGTG
CAGCAGAATGGAGGAGTATCCATGGAAATTTCAGAGGACGAACTTCTCCACCATGAACCT
ATGGATCAAAGCTTACTGAACTTCTCCACCCCTATGGAGACTTCAGGGCATGTCATGCTA
AACTGGAAAGATGAGCTTCCTTTCAGTGACTCTGTCAGCCCAACTGATGAACCCCCACTC
GACGATCTCACCAGACTGGAAGCTATGTTCCCTGTCAGTGATTTTATTGATGCTACATAC
GAGCCACTGGATGATGAATATATTGGCCTGGCTGACATTAGCCACCTGCCTCTTCAATTC
AAGGGCCCAGAGTTCGATCTGGATGCAGAGCTTGATTGGAGTGGGTTCGACTTCGTTTCA
ATGGAAAGTGAACTCGAGTTACTATGA

Peptide Sequence

PEP ID

OQU89260
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:51633326:51636814:-1 gene:SORBI_3002G165600 transcript:OQU89260 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MLRYKKVCIFCCDPDATDSSDDEDDQTSKKEKKIIREVLVPLRKYKTLRPLKAIMPCRIK
DLKSPERKVPLSRYRGVRLRDSGRWQAEIRNPFTKKRDYSLHDTEEAAAATYQAKWFQFH
AEMLAIKAQEPVSKHAALSSSSLVSCASSSVLCKQSIQEVQQNGGVSMEISEDELLHHEP
MDQSLLNFSTPMETSGHVMLNWKDELPFSDSVSPTDEPPLDDLTRLEAMFPVSDFIDATY
EPLDDEYIGLADISHLPLQFKGPEFDLDAELDWSGFDFVSMESELELL

Transcript Sequence

Transcript ID

OQU89260
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:51633326:51636814:-1 gene:SORBI_3002G165600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

GAGTACCGTTGCGCACTTGCGCCTGCGCACACGCAAGTTTAGCACCGTCGTCGAGACGTC
GACCACTGCCTGTTCCAACATGAAGCCATTATAACCCCTCGCCGCCACCCTCCTTTCCGG
CCGGAGAAATCAAAAGCATCAAAATCCGTTCCTTCCGAACCCATCTGCCACGCCCTGCGG
AGTCCGGAAGATCAAGCCCCGATCTGCTTCTCCCCCCCCCCCCCGGATTCCCTCCAATCC
CGTCGGCCCGGCCCGGGCTCCGCAGGTCGCCGTCGCACCCGAGCTCGTGTAAGTGGCGTG
TCCAGCCGAATTGCCTTTCTTCGTTCGCGGGACGTGCGTGAGGTTTCCTAATTCGGATGA
TCTCTTTTCCCTCCGCCTGCCCTGTTTATGTTCTCGGGACTTTTTCTTGGGAAATTTGGG
CGGGCAAGGGTTCTTGGAGTTCCGTACGAATTCGAGCTGTTCTTTTCTCTCTCTTTTTAC
CTTCCTTTCCTTTTTCCGGTAATTTTTCTTCGGCATTGCTCCAATACCGAAGGTCCGAAG
CTGCTGTCTCTTTCTCTATAGTCGTAAGCGGAAAAAAAAAGGAATATTCTCTTTCTTCTT
ATATGTGAATTTCCCCAGTTCCCCCTCTTTGTTAGAAATTTGACACAAGTTCTTCGGTGT
TTGTGCGACGAGCAGCAGAGAACAGGGGGTGGAGTATTCCTCGCCGCCGCTGCACGGCAC
GCGCGCGCTGTTGATTTATGTCGTCCGCACTGCTCCAGCTTCATGGTTCTGAGCTCCAGT
CACCAGCCTCCTCTTTCTCTCTTCTCCTCCAGCCTTGGCAGAGGGGCGCCAGAGCCTATT
GGTTTCGCTTCAGGATCTCTAGGTAACTTTCGGCATGTCTGATTGAGCTACATTACGGCC
AAGTTGGTGCGAAGATTTCTTTTTCTGTTGTAGTCTCCAATCCTGTTACCCTGCTTATAG
TCTCCTATATGAACCAGTCAATCAGACTATGTTATCCAAAGTTTCTGTTGCCTATCTGTC
TGACGGTACTTCCTTCTTCAGTTGTCGCTGTTGTGTTTTTTACTTTCCCCAATTCAGCAG
TCAGGGATGCTTGCTTGTTTGTAGTAGCAAACCATCAAAGTTTTTTTTTTCTATTGCCAT
GAAAACTGATCTGTTGTTCACATGTTAATGCAATAATTGTCTGCTTGTTTAGTCTCTGGT
TTCTGTTTGGAGCTGGATGATAACTGATCTGTACATTCTATATGAACATAATAATATTAC
CTCATTAGTTTGGCATGCAAAGATGGAGGTTTATATCAGGTCATATCTTGCTCATGTATT
GCAAGAGCTCATATATTCAAGTAATGTGCATTTCAGTTTAAGTTTTCTTTAGTAGTTTAC
ATTGGTTTCAGATTTGGATTTGCGGTCAAGTACTCTGGGTTCCTGCATACGAGTTGAAGA
ATCCCTCAGATAACAAGCAATCTTGGTAAGTGTTAAACTATATGGAACTATACTTTCAAA
CAAATTAAGAGTGAACAGAGTATCCGCTATTTCCCTTCTCTTAACTTGGGTGAGCCCTTG
TCTTATAATCTTGTCTGATTTGAATGCTACCAGGTTTGGTTTGGGTGGATTGTGTTTGGC
ACCCCTGGATTGTATTTGGTATCCCTCCTCTAAGTTCAACAGTTGGCCTGAATTTTAATT
TCTGAGACATCTTTGGCAAAGAAAACTTATCTCCCTTTCTCCATCTCTGTTCAGAAGTTA
AAAGAGAACCATCTTTCTGATTTGGTAAATTCGTTACTCAAGTTGTAGGCATACCTTACT
TGGTATGTGGAGGCATCTTCTCTTTTCATATATGTGTGATGATAGTAAACCTTGTATTAG
CAGATTTGATGAAATCAGTGTCCGTATGTGCAGATTGCTATTGCGTGGGATCTGGATGTT
GCGCTACAAGAAGGTCTGCATTTTCTGCTGCGATCCTGATGCAACTGATTCCTCCGATGA
TGAGGATGATCAGACCTCCAAGAAAGAAAAGAAAATTATAAGAGAGGTTCTAGTTCCCTT
AAGGAAATATAAGACCTTGAGACCTCTAAAAGCCATTATGCCATGTCGAATAAAGGATCT
GAAAAGTCCAGAAAGGAAGGTACCATTGAGCAGGTACCGTGGTGTGCGCCTGCGGGACTC
TGGTCGGTGGCAAGCAGAGATTCGCAATCCTTTCACAAAGAAACGAGACTACAGTTTACA
TGACACTGAGGAGGCTGCTGCTGCAACATATCAGGCAAAATGGTTCCAGTTCCACGCAGA
GATGCTGGCAATAAAAGCTCAAGAGCCTGTGTCAAAACATGCAGCTTTGTCCAGCTCATC
CTTGGTTTCCTGTGCCTCTTCATCTGTGTTATGCAAGCAGAGCATACAAGAAGTGCAGCA
GAATGGAGGAGTATCCATGGAAATTTCAGAGGACGAACTTCTCCACCATGAACCTATGGA
TCAAAGCTTACTGAACTTCTCCACCCCTATGGAGACTTCAGGGCATGTCATGCTAAACTG
GAAAGATGAGCTTCCTTTCAGTGACTCTGTCAGCCCAACTGATGAACCCCCACTCGACGA
TCTCACCAGACTGGAAGCTATGTTCCCTGTCAGTGATTTTATTGATGCTACATACGAGCC
ACTGGATGATGAATATATTGGCCTGGCTGACATTAGCCACCTGCCTCTTCAATTCAAGGG
CCCAGAGTTCGATCTGGATGCAGAGCTTGATTGGAGTGGGTTCGACTTCGTTTCAATGGA
AAGTGAACTCGAGTTACTATGAGTTTGCATCAGAAATGCCTCCTACTGAAACCTTGGATG
CAACCTCTTTTCAATGGAAAATGAATTCGTGTTACTGTGAGGTTGCCTCAGAGATAGTTC
CGATGAAACCTGCTCTTCACAGTGTTCAATTCTGCCAAAACCTGCTGCTGATGCTGTTAT
CTTCTGCTGAAACCTGCTTTTGGTGGTGTTTATTATGCAGGAACTTGCTCTTGATTCTGA
CTTGAGCTTTAGATTTCAGTTTGTTGGGTGCATGTTGGTGGGATGTGGTGAGAAGTTAAC
CTATGAGTTTTGTCTGGGACTGTCCTAGAGTAACTTGCCTGTGTGTGCTAACTGCTAGTA
TCTAACTAGTTCTAACTTCAGAGCTGATGCTGATGAATCAGCTGTGCAAGCCGGCAGCCT
GTTGCATATTTTGGCATGTATTTCTAACTACATCTGTACGTGATATGTTTGATGTTTCCG
CCTGTATGCATGTACCTGTAAGATTTCATTGCTAACTGTATGGAGCAGCATAGCTTGAGC
GAATGGATATTGGATTAATTACTTACAGTTAATCATGCTGAGAAAATAGTTAGTTTTAGG
AAGTTGGATAAAGAAATTTAGAATATTACTCCATCTGAATAGGTTTGTGTTCCCTTTTTG
TGTTATCTAAATTGAACATAATGAGCACAATTTCCTTCTGAAGAGGAGTTATCTATCTGC
ACTTATGTG