Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU89150
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:45141437:45154105:-1 gene:SORBI_3002G151600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGAATACCGGCCCTCCGACAGCAGCGGAACTGATGATGATCTTCCACAATTTCCAAAT
AGTAGGAGTATCAGAGGCAGTGGACGTGTCAGTGGTAATGGGAGAGCTCTTGTTCCTGCC
AGTTCATATGCTAGGGCACCGACAGATATGGAAGCACAAATTCAACAACTTGAGCAAGAA
GCATATTGCTCAGTCCTTCGTGCATTCAAAGCCCAGTCTGACGCCATTACATGGGAGAAG
GAAGGTCTCATGACTGAACTTAGGAAGGAGCTAAGAGTATCTGACAAAGCACACAGGGAG
CTGTTAAATAGAGTCAACAACGATAATATTATATGTAGCATAAGGGAATGGAGATCAACA
GGAGGGCTTCAGGCAGGCTTGTCCAATAACCCACAACCAATTCATGACCCTGTTCCCAGT
CCTACCACCTCTGGACGGAAGAGGCAAAAGACATCTCAATCTGTTCCTGCTTTACCTGCA
CCGCCTCTTGCACTGCATTCACAGCAGCTGGCTACACCAACACAGCCATCGTCTTCAACT
GCTAGGAAAGCAGTTCCCCCAGGCCCTAAAGGCAAAAAGATGAAACCAGGTCAGAAGGTA
CCAGGTGGCTCTGCAGCCAAGCCCATGTCATCTTCAGCAGGTCCTAGTGGAAGAGGACCA
CACATGAATAGGAATTTTCCTGGTGGTTCTGCTCCTGAAGCTCAAGCTCAGAATCTTGAT
CCATTGGTTGGTCGTAAAGTGATGAGTCGGTGGCCTGAAGATAATAGTTTCTATGAAGCA
GTCATATCCGATTATAATGCTGAAACGGGCCTTTATGCGTTGGTTTATGACATCAATACG
GCAAATGAAACCTGGGAGTGGGTTGATCTTAAAGAGATGGGACCTGAAGACATAAGATGG
CAAGAGGATGACTCTGGGATAGACCCTGTGACATATCTGCGCAGCCGAGGTGCCCCAACT
AGTGGGGTTAGGAAGCCAACAGGTCGCGGTGGGCCCATGCCAGGTTCTGGAAGAGGAAGA
GGATTACAGAAGAACATGTCTAAGAAAGATTTTCCACCTCCACAAAACGGTGTTGGCAAG
AGAAGTTCCGATGACATTGATATCCTTCATACTGAGAGCCTAATAAAAGAGGTGGAGAAA
GTTTTCAGCATTAGCAATCCTGATCCACAGGAAGTAGAAAAGGCAAAGAAAGCACTGAAG
GAGCAAGAACAGTCGTTGATTGACGCGATAGCAAGGCTTGCTGAGGCATCAGATGGTGAA
AGTGATGGGCACAATCGTGGGCGAAGGAACTTGTATGCTGGTAACCAGCATCAAGCAAAC
TACATTGATGCCATGCCCGTTGGTGACCAAGCTGATGCCATGTAA

Peptide Sequence

PEP ID

OQU89150
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:45141437:45154105:-1 gene:SORBI_3002G151600 transcript:OQU89150 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MEYRPSDSSGTDDDLPQFPNSRSIRGSGRVSGNGRALVPASSYARAPTDMEAQIQQLEQE
AYCSVLRAFKAQSDAITWEKEGLMTELRKELRVSDKAHRELLNRVNNDNIICSIREWRST
GGLQAGLSNNPQPIHDPVPSPTTSGRKRQKTSQSVPALPAPPLALHSQQLATPTQPSSST
ARKAVPPGPKGKKMKPGQKVPGGSAAKPMSSSAGPSGRGPHMNRNFPGGSAPEAQAQNLD
PLVGRKVMSRWPEDNSFYEAVISDYNAETGLYALVYDINTANETWEWVDLKEMGPEDIRW
QEDDSGIDPVTYLRSRGAPTSGVRKPTGRGGPMPGSGRGRGLQKNMSKKDFPPPQNGVGK
RSSDDIDILHTESLIKEVEKVFSISNPDPQEVEKAKKALKEQEQSLIDAIARLAEASDGE
SDGHNRGRRNLYAGNQHQANYIDAMPVGDQADAM

Transcript Sequence

Transcript ID

OQU89150
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:45141437:45154105:-1 gene:SORBI_3002G151600 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

TCTTTTCTCCCTCCTCCGTTTCGCTTGCCCGAAATCGAAGTTGAAGTGTCCGATACCATA
CCAGCAGTAGCAGCACAGCGCAGCTAGTAGCTCTCTTGCTCCTCCCCACCCCCAACCTCT
CCGTCTCCTCCAAATCTCGCCGGATTCCGCCTCCCCGCCCGCCCCCGCATCCGCCGCAGG
TGAGCGCTCGCTGGCCCTTGGCCGCCACGGTGGCGGCCTTGGGGGTGGCAGCTGGAGCCC
CGGCGTGGTGGAGGGAGCTGACCCCTGTTCGTTGGGCGCTTTCAGGTTCGCGCCCGTTGC
ACCACCGCCGGTGGTGTGGGTGCTGGTTGGCGGAGTCGACCCCGAGGGTCGGCCATGGAA
TACCGGCCCTCCGACAGCAGCGGAACTGATGATGATCTTCCACAATTTCCAAATAGTAGG
AGTATCAGAGGCAGTGGACGTGTCAGTGGTAATGGGAGAGCTCTTGTTCCTGCCAGTTCA
TATGCTAGGGCACCGACAGATATGGAAGCACAAATTCAACAACTTGAGCAAGAAGCATAT
TGCTCAGTCCTTCGTGCATTCAAAGCCCAGTCTGACGCCATTACATGGGAGAAGGAAGGT
CTCATGACTGAACTTAGGAAGGAGCTAAGAGTATCTGACAAAGCACACAGGGAGCTGTTA
AATAGAGTCAACAACGATAATATTATATGTAGCATAAGGGAATGGAGATCAACAGGAGGG
CTTCAGGCAGGCTTGTCCAATAACCCACAACCAATTCATGACCCTGTTCCCAGTCCTACC
ACCTCTGGACGGAAGAGGCAAAAGACATCTCAATCTGTTCCTGCTTTACCTGCACCGCCT
CTTGCACTGCATTCACAGCAGCTGGCTACACCAACACAGCCATCGTCTTCAACTGCTAGG
AAAGCAGTTCCCCCAGGCCCTAAAGGCAAAAAGATGAAACCAGGTCAGAAGGTACCAGGT
GGCTCTGCAGCCAAGCCCATGTCATCTTCAGCAGGTCCTAGTGGAAGAGGACCACACATG
AATAGGAATTTTCCTGGTGGTTCTGCTCCTGAAGCTCAAGCTCAGAATCTTGATCCATTG
GTTGGTCGTAAAGTGATGAGTCGGTGGCCTGAAGATAATAGTTTCTATGAAGCAGTCATA
TCCGATTATAATGCTGAAACGGGCCTTTATGCGTTGGTTTATGACATCAATACGGCAAAT
GAAACCTGGGAGTGGGTTGATCTTAAAGAGATGGGACCTGAAGACATAAGATGGCAAGAG
GATGACTCTGGGATAGACCCTGTGACATATCTGCGCAGCCGAGGTGCCCCAACTAGTGGG
GTTAGGAAGCCAACAGGTCGCGGTGGGCCCATGCCAGGTTCTGGAAGAGGAAGAGGATTA
CAGAAGAACATGTCTAAGAAAGATTTTCCACCTCCACAAAACGGTGTTGGCAAGAGAAGT
TCCGATGACATTGATATCCTTCATACTGAGAGCCTAATAAAAGAGGTGGAGAAAGTTTTC
AGCATTAGCAATCCTGATCCACAGGAAGTAGAAAAGGCAAAGAAAGCACTGAAGGAGCAA
GAACAGTCGTTGATTGACGCGATAGCAAGGCTTGCTGAGGCATCAGATGGTGAAAGTGAT
GGGCACAATCGTGGGCGAAGGAACTTGTATGCTGGTAACCAGCATCAAGCAAACTACATT
GATGCCATGCCCGTTGGTGACCAAGCTGATGCCATGTAAACACTGCATGAACATGTATAC
ACAACATAAGATAATTGTCTGTTGTACAATCCATTGCTAATATTGGTTCTGGATTTAGGT
ATCTGTAGGCTAAGTATCTTTTTGTTTTGGGTCACTTGAATTTTTTTTAGTAGAATTGTA
ATTCAGAATGCTGACCAAGTAAAGCTTGTAGATGTGTGTTTCTTTCTCTAGCTTTTTGTT
AGTGTGGTCTCAGCTTCTATATGCATAATAAAAGGAAAAAGATCACGTTTGTAAAATACT
AAGTTTATCTTTCACCATTTTAATGCAGCAATCATTCGTCATGACAATGAATGCACATAA
AAATAGAGCAGCTGACTGAACGGAATTGCAACTCATCACGACTGCAATCAAACTGTGAAG
CAATCCGTTGAAGAAACAAATGGACCAGTAGGAATGCAGAGGTCTGAAAAGTGAAAACAG
GAGACGAGCTCTACGATATATAAAAAGCAGGAGAGTGCCGCATTCTTTGTTTCAATTTAC
AACAGAACGGTGAAGGCTTAAGCAATGGACTGGAATACTATAATGAAAAAGAAAAAAAGA
CATTCGTGCAAAGTAGGGATTAAACCATTTTGCATGTTGCTCTAACCGTCATCAGAAAAC
AACCCAAATAAACACGAAATAGTAGAGGAGAAACTGTACATAGATAAAGATCAGAATGCC
CTGTGAAATGTAATCATGACTTACATCACCAATGATCACAGGATGTGAAGCCTGAACTGT
GTTTGGCTTACAAGTAGTTTTCACATTGTGATAGTAAAAACCTATGAACTGCAAGCAAAG
CAATATTGTTCATTGACTTGCAGCAAATTGCTTATCTAGCAGCTAGTTTAGAC