Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU89124
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:40518679:40522655:1 gene:SORBI_3002G148900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGGCTGCCGGCGGCCTCGCGCTGCTGCCCGCCCTCCTCGTCGCGGCTCTCTGCGCCGCC
TCGTGGCGCGCCGAGGCGGCGATCGGGGTGAACTGGGGCACCGTGTCCGACCACCGCGCC
CCGCCCGGCGTGGTGGTGGACTTGATGCGCGCGAATCGGATCAGCAAGGTGAAGCTTTTC
GACGCCGACCCGGGAGTCCTGCGCGCGCTCGCCGGCAGCGGCATCCAGGTCATGGTCGGC
GTTACCAACGGCGAGCTCGCAAGCATCGCGGGGTCGCAGGCGGCTGCAGATGACTGGGTC
GCGCAGAACGTGTCCCGATACGTCGGCCGCGGCGGCGTCGACATCCGATACATTGCTGTA
GGCAATGAGCCTTTCCTAACAAGCTACCAAGGTCAATTCCAATCATATATCATTCCAGCA
ATGACAAATATTCAGCAATCGCTGGTGAAAGCTAATCTTGCTAGCTACATAAAGCTAGTA
GTTCCCTGCAATGCAGATGCATATCAGAGTGCTTCTGTTCCATCTCAAGGAGTATTCAGG
ACTGAATTGACTCAGATAATGACCCAGCTGGCTGCTTTTCTGAGCTCTAGTGGGGCACCA
TTCGTCGTCAATATCTACCCATTCCTCAGTCTTTACCAAAGTTCAGATTTCCCACAAGAC
TATGCCTTCTTCGAGGGATCTACTCACCCTGTAGTAGATGGTCCGAATGTGTACTACAAT
GCATTTGATGGGAACTTTGACACACTAGTTTCTGCTCTCAGTAAAATTGGCTACGGGAAC
CTACCTATTGCAATTGGTGAGATAGGTTGGCCAACTGAGGGAGCACCAAGTGCAAACTTA
ACTGCAGCAAGGGCATTCAATCAAGGGCTTATCAATCGTGTTACAAGCAACAAGGGAACT
CCACTCCGACCTGGTGTGCCTCCAGCTGATGTATATCTTTTCAGCCTTCTCGATGAAGAG
GGGAAGAGCATACTACCAGGAAACTTCGAGCGGCACTGGGGGATCTTCTCCTTCGATGGG
CAAGCCAAATACCCCCTGAATCTTGGTCTGGGAAATTCAGTACTGAAGAATGCGAAAGAG
GTTCCTTACCTTCCATCACGTTGGTGTGTCGCAAACCCTGCTCGGAATCTCGACGGTGTT
TCAGATCACATGAAGCTTGCTTGCAGCATGGCTGATTGTACGACTCTGTACTACGGAGGT
TCATGCTATGGTATCGGGGAGAAGGGCAATGTTTCATATGCTTTCAACAGCTACTATCAG
CAGCAGAAGCAGGACCCAAAGAGTTGCGATTTTGGTGGGCTTGGGATGATAACTTACCTT
GATCCATCTATGGGCGAGTGCCGCTTTCTTGTTGGTGTTGATGATAGCAAGAGCTCTGCA
GTCGCCTCTTGTGGCGGTGGATGCTGCGGGGTCTGCTGTGGAATGCACAGGCCTGAGGAT
CTTCCTCGAATTCAGCGGGCTGACGGTGGTGGGGTGGGCGGGCAACAGTTATCGCCGCAG
CAGGCGTGGCCACAGGTCACCTTCGGATGCTGCACCAGCCAGCAGCATTGGCATGCTGAA
ATGAAATGA

Peptide Sequence

PEP ID

OQU89124
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:40518679:40522655:1 gene:SORBI_3002G148900 transcript:OQU89124 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MAAGGLALLPALLVAALCAASWRAEAAIGVNWGTVSDHRAPPGVVVDLMRANRISKVKLF
DADPGVLRALAGSGIQVMVGVTNGELASIAGSQAAADDWVAQNVSRYVGRGGVDIRYIAV
GNEPFLTSYQGQFQSYIIPAMTNIQQSLVKANLASYIKLVVPCNADAYQSASVPSQGVFR
TELTQIMTQLAAFLSSSGAPFVVNIYPFLSLYQSSDFPQDYAFFEGSTHPVVDGPNVYYN
AFDGNFDTLVSALSKIGYGNLPIAIGEIGWPTEGAPSANLTAARAFNQGLINRVTSNKGT
PLRPGVPPADVYLFSLLDEEGKSILPGNFERHWGIFSFDGQAKYPLNLGLGNSVLKNAKE
VPYLPSRWCVANPARNLDGVSDHMKLACSMADCTTLYYGGSCYGIGEKGNVSYAFNSYYQ
QQKQDPKSCDFGGLGMITYLDPSMGECRFLVGVDDSKSSAVASCGGGCCGVCCGMHRPED
LPRIQRADGGGVGGQQLSPQQAWPQVTFGCCTSQQHWHAEMK

Transcript Sequence

Transcript ID

OQU89124
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:40518679:40522655:1 gene:SORBI_3002G148900 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ACAAATACTTCCATTTACCAAAATTGTCCTTTTTTTTCTCTCTCTTGAGTGAGAAGCTTC
AAGCTCACCCGAGCTTCCCACCTCACACCCTCACATCATCATCGGCTCCCTCTCCTCTCC
ATTCTCTTCTCAGTTGTCTCACCAACTCCCCCCAATCCCACCCCAAAGATCCAGTTTCGA
TCCACGAACCCCCCTCCCAATCCTCCAAAGATCACCGCTTTCAGGTACCCCCCGCAATGG
CTGCCGGCGGCCTCGCGCTGCTGCCCGCCCTCCTCGTCGCGGCTCTCTGCGCCGCCTCGT
GGCGCGCCGAGGCGGCGATCGGGGTGAACTGGGGCACCGTGTCCGACCACCGCGCCCCGC
CCGGCGTGGTGGTGGACTTGATGCGCGCGAATCGGATCAGCAAGGTGAAGCTTTTCGACG
CCGACCCGGGAGTCCTGCGCGCGCTCGCCGGCAGCGGCATCCAGGTCATGGTCGGCGTTA
CCAACGGCGAGCTCGCAAGCATCGCGGGGTCGCAGGCGGCTGCAGATGACTGGGTCGCGC
AGAACGTGTCCCGATACGTCGGCCGCGGCGGCGTCGACATCCGATACATTGCTGTAGGCA
ATGAGCCTTTCCTAACAAGCTACCAAGGTCAATTCCAATCATATATCATTCCAGCAATGA
CAAATATTCAGCAATCGCTGGTGAAAGCTAATCTTGCTAGCTACATAAAGCTAGTAGTTC
CCTGCAATGCAGATGCATATCAGAGTGCTTCTGTTCCATCTCAAGGAGTATTCAGGACTG
AATTGACTCAGATAATGACCCAGCTGGCTGCTTTTCTGAGCTCTAGTGGGGCACCATTCG
TCGTCAATATCTACCCATTCCTCAGTCTTTACCAAAGTTCAGATTTCCCACAAGACTATG
CCTTCTTCGAGGGATCTACTCACCCTGTAGTAGATGGTCCGAATGTGTACTACAATGCAT
TTGATGGGAACTTTGACACACTAGTTTCTGCTCTCAGTAAAATTGGCTACGGGAACCTAC
CTATTGCAATTGGTGAGATAGGTTGGCCAACTGAGGGAGCACCAAGTGCAAACTTAACTG
CAGCAAGGGCATTCAATCAAGGGCTTATCAATCGTGTTACAAGCAACAAGGGAACTCCAC
TCCGACCTGGTGTGCCTCCAGCTGATGTATATCTTTTCAGCCTTCTCGATGAAGAGGGGA
AGAGCATACTACCAGGAAACTTCGAGCGGCACTGGGGGATCTTCTCCTTCGATGGGCAAG
CCAAATACCCCCTGAATCTTGGTCTGGGAAATTCAGTACTGAAGAATGCGAAAGAGGTTC
CTTACCTTCCATCACGTTGGTGTGTCGCAAACCCTGCTCGGAATCTCGACGGTGTTTCAG
ATCACATGAAGCTTGCTTGCAGCATGGCTGATTGTACGACTCTGTACTACGGAGGTTCAT
GCTATGGTATCGGGGAGAAGGGCAATGTTTCATATGCTTTCAACAGCTACTATCAGCAGC
AGAAGCAGGACCCAAAGAGTTGCGATTTTGGTGGGCTTGGGATGATAACTTACCTTGATC
CATCTATGGGCGAGTGCCGCTTTCTTGTTGGTGTTGATGATAGCAAGAGCTCTGCAGTCG
CCTCTTGTGGCGGTGGATGCTGCGGGGTCTGCTGTGGAATGCACAGGCCTGAGGATCTTC
CTCGAATTCAGCGGGCTGACGGTGGTGGGGTGGGCGGGCAACAGTTATCGCCGCAGCAGG
CGTGGCCACAGGTCACCTTCGGATGCTGCACCAGCCAGCAGCATTGGCATGCTGAAATGA
AATGAAATGCATCCATGATCAGGATCAGGAAAAAGCTGTGAGGTGATGCCAACATGCTAA
CAGCAGATGAGCATGACTGATGGCCTAACTGCCTGCAAGGCCGTCGGGTACACTCTACTG
ATGAGAATATCTTAACAGCATCTTTGGTGGCATGTCTAAGTCCTATGAATACCAAGAAAT
GAATCAGTCGATCTAAAGCGAAAAGAATATTTTGCAGGACTTACAGAGTGAGGCTGTCGC
CATTGTGATGAAGAGTGCAAGAAGCATGAGCCATGCGACAAGGGCGAGGGCAGTGTTCTT
CATGCGGCTCATGCCTCCCTTTGTGTTGAATCTTCAGATGTCTTCTTGTGAGCAGCTGAG
ATGGTAATGTTGCTATGTGCTGTGTGTGTGTGTGTGTGTCTATATATAGAGGTGACCGCC
TATTCAAATTGTGATAAGATGCAGCCGTTTTGCTGGACTACTGTAGTTATTGGACTGTTG
ACGCCATCTAGATCTCTCTGTGTTGACTCTTGAGATGGTGGTTTTGATAATTTGTTTCCT
AGCTGACGTTTCTTCGAATACAACTTCCATTGTGATGTGGC