Plant GARDEN
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TOP > About the Species(Sorghum bicolor ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Sorghum bicolor

CDS Sequence

CDS ID

OQU89100
CDS Infomation

cds chromosome:Sorghum_bicolor_NCBIv3:2:29037648:29043667:-1 gene:SORBI_3002G146000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGCCAACAGCAGAGACGACGACGCCCGTGCCGCCAGCGCTCTCCGGGCAAGGCCGGACA
GTTTGCGTCACCGGAGCTGGAGGGTTCATCGCCTCCTGGCTTGTCAAGCGCCTCCTCGAG
AAGGGTTACACAGTCCGTGGCACGGTCAGGAACCCTGTCGATCCAAAGAACGACCACCTG
AGGGCCCTTGACGGCGCCGCCGATCGCCTCGTCCTCCTGCGTGCCGATCTGCTGGATCCA
GAAAGCCTTGTCGAGGCCTTCTCCGGCTGCGACGGCGTCTTCCACGCCGCCTCCCCGGTC
ACCGATGACCCTGAGATGATGATCGAGCCAGCAATCCGGGGCACACAATATGTGATGACG
GCGGCGGCAGACACCGGCGTCAAGCGCGTCGTGTTCACGTCCTCCATCGGCACAGTGTAC
ATGAACCCCTACCGTGAACCCAACAAGCCTGTCGACGACACCTGCTGGAGCGATCTTGAG
TATTGCAAGAATACACAGAACTGGTATTGCTACGCCAAGACAGTGGCGGAGCAGGGCGCA
TGGGAGGTGGCGCGGAAGCGAGGCCTGGACCTGATCGTGGTGAACCCGGTGCTGGTGCTG
GGTCCGTTGCTGCAGCCAACAGTGAACGCCAGCACGGACCACGTGATGAAGTACCTGACG
GGGTCGGCCAAGACGTACGTGAACGCCGCGCAGGCGTACGTGCACGTCCAGGACGTCGCG
GAGGCGCACGTCCGGGTGTACGAGGCACCCTACGCGCATGGGCGCTACATCTGCGCCGAG
AGCACCCTCCACCGCGGCGAGCTCTGCCGCATCCTCGCTAAGCTCTTCCCAGAGTACCCC
ATACCCACAAAGTGCAAGGACGACGTGAACCCTCCGGTGACAGGATACAAGTTCACGAAC
CAGCGGCTCAAGGATCTTGGGATGGACTTTGTGCCGGTGCTGCAGTGCCTCTACGAGACA
GTGAAGAGCCTCCAGGAGAAAGGCATGCTGCCCGTGCTTCCGCCAAAAGACGACCAGGAC
CAACAACTCCACAAATCATGA

Peptide Sequence

PEP ID

OQU89100
PEP Infomation

pep chromosome:Sorghum_bicolor_NCBIv3:2:29037648:29043667:-1 gene:SORBI_3002G146000 transcript:OQU89100 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MPTAETTTPVPPALSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHL
RALDGAADRLVLLRADLLDPESLVEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTQYVMT
AAADTGVKRVVFTSSIGTVYMNPYREPNKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGA
WEVARKRGLDLIVVNPVLVLGPLLQPTVNASTDHVMKYLTGSAKTYVNAAQAYVHVQDVA
EAHVRVYEAPYAHGRYICAESTLHRGELCRILAKLFPEYPIPTKCKDDVNPPVTGYKFTN
QRLKDLGMDFVPVLQCLYETVKSLQEKGMLPVLPPKDDQDQQLHKS

Transcript Sequence

Transcript ID

OQU89100
Transcript Infomation

cdna chromosome:Sorghum_bicolor_NCBIv3:2:29037648:29043667:-1 gene:SORBI_3002G146000 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

AGCACACACATCCTAGTACACTACTGTACTCATCAGCTACTTACCCGCCTAGCTATATAT
AGCGTACATGTCCTCAGACTAATAACCCGCCTAGCTATCTATCTATCCACCGATATATAA
ACCTCTCTAGTCTAGACTAGAAACCAACATCTATCTATCCATTCTTTGAAGAGATCGATC
GAAGGACCGATCGAGATAGCTAGGATGCCAACAGCAGAGACGACGACGCCCGTGCCGCCA
GCGCTCTCCGGGCAAGGCCGGACAGTTTGCGTCACCGGAGCTGGAGGGTTCATCGCCTCC
TGGCTTGTCAAGCGCCTCCTCGAGAAGGGTTACACAGTCCGTGGCACGGTCAGGAACCCT
GTCGATCCAAAGAACGACCACCTGAGGGCCCTTGACGGCGCCGCCGATCGCCTCGTCCTC
CTGCGTGCCGATCTGCTGGATCCAGAAAGCCTTGTCGAGGCCTTCTCCGGCTGCGACGGC
GTCTTCCACGCCGCCTCCCCGGTCACCGATGACCCTGAGATGATGATCGAGCCAGCAATC
CGGGGCACACAATATGTGATGACGGCGGCGGCAGACACCGGCGTCAAGCGCGTCGTGTTC
ACGTCCTCCATCGGCACAGTGTACATGAACCCCTACCGTGAACCCAACAAGCCTGTCGAC
GACACCTGCTGGAGCGATCTTGAGTATTGCAAGAATACACAGAACTGGTATTGCTACGCC
AAGACAGTGGCGGAGCAGGGCGCATGGGAGGTGGCGCGGAAGCGAGGCCTGGACCTGATC
GTGGTGAACCCGGTGCTGGTGCTGGGTCCGTTGCTGCAGCCAACAGTGAACGCCAGCACG
GACCACGTGATGAAGTACCTGACGGGGTCGGCCAAGACGTACGTGAACGCCGCGCAGGCG
TACGTGCACGTCCAGGACGTCGCGGAGGCGCACGTCCGGGTGTACGAGGCACCCTACGCG
CATGGGCGCTACATCTGCGCCGAGAGCACCCTCCACCGCGGCGAGCTCTGCCGCATCCTC
GCTAAGCTCTTCCCAGAGTACCCCATACCCACAAAGTGCAAGGACGACGTGAACCCTCCG
GTGACAGGATACAAGTTCACGAACCAGCGGCTCAAGGATCTTGGGATGGACTTTGTGCCG
GTGCTGCAGTGCCTCTACGAGACAGTGAAGAGCCTCCAGGAGAAAGGCATGCTGCCCGTG
CTTCCGCCAAAAGACGACCAGGACCAACAACTCCACAAATCATGATTATTTCCAACGCTG
ATACTGCTACAACATATCATATATATTTATATTTATATATAAGCTATAGCGGATTGATAT
AATGAACCCAGCTTTTTATCCACGATATATATAAATGATGTACACGTGGTGACTTTAACT
GGTGCATGCTTTCCTGATGAGTGCCACCGACCCATATATATATACCAGTGCAGGATGACG
CACAAATGCAA